RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 ZSCAN16Q9H4T2 348 aaPredicted RBP12.66□□□□□ -0.38
COL11A1-202ENST00000358392 CPSF2Q9P2I0 782 aaKnown RBP12.66□□□□□ -0.38
COL11A1-202ENST00000358392 ATP6V0A2Q9Y487 856 aa12.66□□□□□ -0.38
COL11A1-202ENST00000358392 RFC1P35251 1148 aaPredicted RBP12.66□□□□□ -0.38
COL11A1-202ENST00000358392 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.66□□□□□ -0.38
COL11A1-202ENST00000358392 GMNNO75496 209 aa12.65□□□□□ -0.38
COL11A1-202ENST00000358392 RAPGEF1Q13905 1077 aa12.65□□□□□ -0.38
COL11A1-202ENST00000358392 DCAF17Q5H9S7 520 aaPredicted RBP12.65□□□□□ -0.38
COL11A1-202ENST00000358392 ERMNQ8TAM6 284 aa12.65□□□□□ -0.38
COL11A1-202ENST00000358392 ZNF622Q969S3 477 aaKnown RBP eCLIP12.65□□□□□ -0.38
COL11A1-202ENST00000358392 FAM184BQ9ULE4 1060 aa12.65□□□□□ -0.38
COL11A1-202ENST00000358392 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.65□□□□□ -0.38
COL11A1-202ENST00000358392 HLA-DOAP06340 250 aa12.65□□□□□ -0.38
COL11A1-202ENST00000358392 TTC22Q5TAA0 569 aa12.65□□□□□ -0.38
COL11A1-202ENST00000358392 WAPLQ7Z5K2 1190 aa12.65□□□□□ -0.38
COL11A1-202ENST00000358392 PPANQ9NQ55 473 aaKnown RBP12.65□□□□□ -0.38
COL11A1-202ENST00000358392 ZBTB43O43298 467 aa12.65□□□□□ -0.38
COL11A1-202ENST00000358392 BUB1BO60566 1050 aaPredicted RBP12.65□□□□□ -0.38
COL11A1-202ENST00000358392 MCM7P33993 719 aa12.65□□□□□ -0.38
COL11A1-202ENST00000358392 PRIM1P49642 420 aaKnown RBP12.65□□□□□ -0.38
COL11A1-202ENST00000358392 NEK11Q8NG66 645 aa12.65□□□□□ -0.38
COL11A1-202ENST00000358392 NUDT16Q96DE0 195 aaKnown RBP12.65□□□□□ -0.38
COL11A1-202ENST00000358392 ECHDC1Q9NTX5 307 aa12.65□□□□□ -0.38
COL11A1-202ENST00000358392 SARNPP82979 210 aaKnown RBP12.65□□□□□ -0.38
COL11A1-202ENST00000358392 RTN1Q16799 776 aa12.65□□□□□ -0.38
COL11A1-202ENST00000358392 GBP7Q8N8V2 638 aaPredicted RBP12.65□□□□□ -0.38
COL11A1-202ENST00000358392 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.65□□□□□ -0.38
COL11A1-202ENST00000358392 GKAP1Q5VSY0 366 aaPredicted RBP12.65□□□□□ -0.38
COL11A1-202ENST00000358392 IFNKQ9P0W0 207 aa12.65□□□□□ -0.38
COL11A1-202ENST00000358392 SLC4A4Q9Y6R1 1079 aa12.65□□□□□ -0.38
COL11A1-202ENST00000358392 KRT86O43790 486 aa12.65□□□□□ -0.39
COL11A1-202ENST00000358392 KRT9P35527 623 aa12.65□□□□□ -0.39
COL11A1-202ENST00000358392 ALDH1L2Q3SY69 923 aa12.65□□□□□ -0.39
COL11A1-202ENST00000358392 CCT6BQ92526 530 aa12.65□□□□□ -0.39
COL11A1-202ENST00000358392 KRT5P13647 590 aa12.64□□□□□ -0.39
COL11A1-202ENST00000358392 PRPHP41219 470 aa12.64□□□□□ -0.39
COL11A1-202ENST00000358392 NAPAP54920 295 aa12.64□□□□□ -0.39
COL11A1-202ENST00000358392 SP4Q02446 784 aa12.64□□□□□ -0.39
COL11A1-202ENST00000358392 CCDC42Q96M95 316 aa12.64□□□□□ -0.39
COL11A1-202ENST00000358392 BAG3O95817 575 aa12.64□□□□□ -0.39
COL11A1-202ENST00000358392 CCT6AP40227 531 aaKnown RBP12.64□□□□□ -0.39
COL11A1-202ENST00000358392 GPIHBP1Q8IV16 184 aa12.64□□□□□ -0.39
COL11A1-202ENST00000358392 CCDC94Q9BW85 323 aaPredicted RBP12.64□□□□□ -0.39
COL11A1-202ENST00000358392 PSMA7O14818 248 aa12.64□□□□□ -0.39
COL11A1-202ENST00000358392 U2AF2P26368 475 aaKnown RBP eCLIP12.64□□□□□ -0.39
COL11A1-202ENST00000358392 PPP1R42Q7Z4L9 355 aa12.64□□□□□ -0.39
COL11A1-202ENST00000358392 VPS52Q8N1B4 723 aa12.64□□□□□ -0.39
COL11A1-202ENST00000358392 MRPS27Q92552 414 aaKnown RBP12.64□□□□□ -0.39
COL11A1-202ENST00000358392 ZNF131P52739 623 aa12.64□□□□□ -0.39
COL11A1-202ENST00000358392 PPP2R5DQ14738 602 aa12.64□□□□□ -0.39
COL11A1-202ENST00000358392 KRT83P78385 493 aa12.64□□□□□ -0.39
COL11A1-202ENST00000358392 UBE3BQ7Z3V4 1068 aa12.64□□□□□ -0.39
COL11A1-202ENST00000358392 LMBR1Q8WVP7 490 aa12.64□□□□□ -0.39
COL11A1-202ENST00000358392 POLA1P09884 1462 aaPredicted RBP12.64□□□□□ -0.39
COL11A1-202ENST00000358392 FMNL3Q8IVF7 1028 aa12.64□□□□□ -0.39
COL11A1-202ENST00000358392 AGTPBP1Q9UPW5 1226 aa12.64□□□□□ -0.39
COL11A1-202ENST00000358392 ANXA1P04083 346 aa12.63□□□□□ -0.39
COL11A1-202ENST00000358392 IMPG2Q9BZV3 1241 aa12.63□□□□□ -0.39
COL11A1-202ENST00000358392 XRCC6P12956 609 aaKnown RBP eCLIP12.63□□□□□ -0.39
COL11A1-202ENST00000358392 RXRAP19793 462 aa12.63□□□□□ -0.39
COL11A1-202ENST00000358392 PPFIBP2Q8ND30 876 aa12.63□□□□□ -0.39
COL11A1-202ENST00000358392 KCNG4Q8TDN1 519 aa12.63□□□□□ -0.39
COL11A1-202ENST00000358392 ARHGEF2Q92974 986 aaKnown RBP12.63□□□□□ -0.39
COL11A1-202ENST00000358392 CRNKL1Q9BZJ0 848 aaKnown RBP12.63□□□□□ -0.39
COL11A1-202ENST00000358392 WWC3Q9ULE0 1092 aa12.63□□□□□ -0.39
COL11A1-202ENST00000358392 ATP2A2P16615 1042 aaKnown RBP12.63□□□□□ -0.39
COL11A1-202ENST00000358392 LRRC43Q8N309 656 aa12.63□□□□□ -0.39
COL11A1-202ENST00000358392 CFTRP13569 1480 aa12.63□□□□□ -0.39
COL11A1-202ENST00000358392 TXNDC9O14530 226 aa12.63□□□□□ -0.39
COL11A1-202ENST00000358392 NME9Q86XW9 330 aa12.63□□□□□ -0.39
COL11A1-202ENST00000358392 HAUS7Q99871 368 aa12.63□□□□□ -0.39
COL11A1-202ENST00000358392 CLSTN2Q9H4D0 955 aa12.63□□□□□ -0.39
COL11A1-202ENST00000358392 NBPF7P0C2Y1 421 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-202ENST00000358392 CYP7A1P22680 504 aa12.62□□□□□ -0.39
COL11A1-202ENST00000358392 TYRO3Q06418 890 aa12.62□□□□□ -0.39
COL11A1-202ENST00000358392 CLNS1AP54105 237 aaKnown RBP12.62□□□□□ -0.39
COL11A1-202ENST00000358392 NEDD9Q14511 834 aa12.62□□□□□ -0.39
COL11A1-202ENST00000358392 RASSF4Q9H2L5 321 aa12.62□□□□□ -0.39
COL11A1-202ENST00000358392 CTNND2Q9UQB3 1225 aa12.62□□□□□ -0.39
COL11A1-202ENST00000358392 FAM83GA6ND36 823 aa12.62□□□□□ -0.39
COL11A1-202ENST00000358392 OSCARQ8IYS5 282 aa12.62□□□□□ -0.39
COL11A1-202ENST00000358392 FAM200AQ8TCP9 573 aa12.62□□□□□ -0.39
COL11A1-202ENST00000358392 KAT6BQ8WYB5 2073 aa12.62□□□□□ -0.39
COL11A1-202ENST00000358392 VGLL3A8MV65 326 aa12.62□□□□□ -0.39
COL11A1-202ENST00000358392 CCDC122Q5T0U0 273 aa12.62□□□□□ -0.39
COL11A1-202ENST00000358392 MTRF1LQ9UGC7 380 aaKnown RBP12.62□□□□□ -0.39
COL11A1-202ENST00000358392 HDXQ7Z353 690 aa12.62□□□□□ -0.39
COL11A1-202ENST00000358392 PPP2R3AQ06190 1150 aa12.61□□□□□ -0.39
COL11A1-202ENST00000358392 SMARCC2Q8TAQ2 1214 aa12.61□□□□□ -0.39
COL11A1-202ENST00000358392 GTPBP4Q9BZE4 634 aaKnown RBP12.61□□□□□ -0.39
COL11A1-202ENST00000358392 PKD2L1Q9P0L9 805 aa12.61□□□□□ -0.39
COL11A1-202ENST00000358392 VAV2P52735 878 aa12.61□□□□□ -0.39
COL11A1-202ENST00000358392 EMILIN1Q9Y6C2 1016 aa12.61□□□□□ -0.39
COL11A1-202ENST00000358392 E7EVH7 732 aa12.61□□□□□ -0.39
COL11A1-202ENST00000358392 SDSP20132 328 aa12.61□□□□□ -0.39
COL11A1-202ENST00000358392 USP37Q86T82 979 aa12.61□□□□□ -0.39
COL11A1-202ENST00000358392 TBC1D32Q96NH3 1257 aa12.61□□□□□ -0.39
COL11A1-202ENST00000358392 AFAP1L1Q8TED9 768 aa12.61□□□□□ -0.39
COL11A1-202ENST00000358392 RBM8AQ9Y5S9 174 aaKnown RBP12.61□□□□□ -0.39
COL11A1-202ENST00000358392 HARSP12081 509 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms