RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 IRS2Q9Y4H2 1338 aa18.32■□□□□ 0.52
CCNE1-202ENST00000357943 ZNF609O15014 1411 aa18.32■□□□□ 0.52
CCNE1-202ENST00000357943 RIMBP2O15034 1052 aa18.31■□□□□ 0.52
CCNE1-202ENST00000357943 WASHC4Q2M389 1173 aa18.31■□□□□ 0.52
CCNE1-202ENST00000357943 CLASRPQ8N2M8 674 aaKnown RBP18.31■□□□□ 0.52
CCNE1-202ENST00000357943 NEUROD6Q96NK8 337 aa18.31■□□□□ 0.52
CCNE1-202ENST00000357943 FER1L6Q2WGJ9 1857 aa18.31■□□□□ 0.52
CCNE1-202ENST00000357943 SLC5A1P13866 664 aa18.31■□□□□ 0.52
CCNE1-202ENST00000357943 ADORA1P30542 326 aa18.31■□□□□ 0.52
CCNE1-202ENST00000357943 PRELPP51888 382 aa18.31■□□□□ 0.52
CCNE1-202ENST00000357943 CENPQQ7L2Z9 268 aaPredicted RBP18.31■□□□□ 0.52
CCNE1-202ENST00000357943 AACSQ86V21 672 aa18.31■□□□□ 0.52
CCNE1-202ENST00000357943 SUPT20HQ8NEM7 779 aa18.31■□□□□ 0.52
CCNE1-202ENST00000357943 CCDC8Q9H0W5 538 aaPredicted RBP18.31■□□□□ 0.52
CCNE1-202ENST00000357943 TLR7Q9NYK1 1049 aaKnown RBP18.31■□□□□ 0.52
CCNE1-202ENST00000357943 LTBP3Q9NS15 1303 aa18.3■□□□□ 0.52
CCNE1-202ENST00000357943 MED23Q9ULK4 1368 aa18.3■□□□□ 0.52
CCNE1-202ENST00000357943 GRIN3BO60391 1043 aa18.3■□□□□ 0.52
CCNE1-202ENST00000357943 IFIT1P09914 478 aaKnown RBP18.3■□□□□ 0.52
CCNE1-202ENST00000357943 NUCB1Q02818 461 aa18.3■□□□□ 0.52
CCNE1-202ENST00000357943 AOC3Q16853 763 aa18.3■□□□□ 0.52
CCNE1-202ENST00000357943 XAGE2Q96GT9 111 aa18.3■□□□□ 0.52
CCNE1-202ENST00000357943 EYA3Q99504 573 aa18.3■□□□□ 0.52
CCNE1-202ENST00000357943 ZC3H12CQ9C0D7 883 aaKnown RBP18.3■□□□□ 0.52
CCNE1-202ENST00000357943 LNPKQ9C0E8 428 aa18.3■□□□□ 0.52
CCNE1-202ENST00000357943 PPIP5K2O43314 1243 aa18.29■□□□□ 0.52
CCNE1-202ENST00000357943 GYG1P46976 350 aa18.29■□□□□ 0.52
CCNE1-202ENST00000357943 KIAA2012Q0VF49 1180 aa18.29■□□□□ 0.52
CCNE1-202ENST00000357943 C16orf71Q8IYS4 520 aaPredicted RBP18.29■□□□□ 0.52
CCNE1-202ENST00000357943 FAM84BQ96KN1 310 aaPredicted RBP18.29■□□□□ 0.52
CCNE1-202ENST00000357943 DBNDD2Q9BQY9 259 aa18.29■□□□□ 0.52
CCNE1-202ENST00000357943 DBNLQ9UJU6 430 aaKnown RBP18.29■□□□□ 0.52
CCNE1-202ENST00000357943 C15orf52Q6ZUT6 534 aaKnown RBP18.28■□□□□ 0.52
CCNE1-202ENST00000357943 CHD1LQ86WJ1 897 aa18.28■□□□□ 0.52
CCNE1-202ENST00000357943 IARSP41252 1262 aaKnown RBP18.27■□□□□ 0.52
CCNE1-202ENST00000357943 BCAMP50895 628 aa18.27■□□□□ 0.52
CCNE1-202ENST00000357943 ZBTB47Q9UFB7 747 aaPredicted RBP18.27■□□□□ 0.52
CCNE1-202ENST00000357943 IFIT2P09913 472 aaKnown RBP18.27■□□□□ 0.51
CCNE1-202ENST00000357943 DOK7Q18PE1 504 aa18.27■□□□□ 0.51
CCNE1-202ENST00000357943 OTUD7AQ8TE49 926 aaPredicted RBP18.27■□□□□ 0.51
CCNE1-202ENST00000357943 CAVIN4Q5BKX8 364 aa18.26■□□□□ 0.51
CCNE1-202ENST00000357943 LARGE2Q8N3Y3 721 aa18.26■□□□□ 0.51
CCNE1-202ENST00000357943 VPS33BQ9H267 617 aa18.26■□□□□ 0.51
CCNE1-202ENST00000357943 DBNDD1Q9H9R9 158 aa18.26■□□□□ 0.51
CCNE1-202ENST00000357943 COL4A5P29400 1685 aa18.26■□□□□ 0.51
CCNE1-202ENST00000357943 LMNB1P20700 586 aa18.25■□□□□ 0.51
CCNE1-202ENST00000357943 HIBADHP31937 336 aaKnown RBP18.25■□□□□ 0.51
CCNE1-202ENST00000357943 PHKA1P46020 1223 aa18.25■□□□□ 0.51
CCNE1-202ENST00000357943 CCDC102BQ68D86 513 aa18.25■□□□□ 0.51
CCNE1-202ENST00000357943 FBXO33Q7Z6M2 555 aa18.25■□□□□ 0.51
CCNE1-202ENST00000357943 VPS37DQ86XT2 251 aa18.25■□□□□ 0.51
CCNE1-202ENST00000357943 GORABQ5T7V8 394 aa18.24■□□□□ 0.51
CCNE1-202ENST00000357943 ZNF804AQ7Z570 1209 aa18.24■□□□□ 0.51
CCNE1-202ENST00000357943 CD209Q9NNX6 404 aa18.24■□□□□ 0.51
CCNE1-202ENST00000357943 COA1Q9GZY4 146 aa18.23■□□□□ 0.51
CCNE1-202ENST00000357943 IQSEC3Q9UPP2 1182 aaPredicted RBP18.23■□□□□ 0.51
CCNE1-202ENST00000357943 ARAP2Q8WZ64 1704 aa18.23■□□□□ 0.51
CCNE1-202ENST00000357943 G3V3G9 751 aa18.23■□□□□ 0.51
CCNE1-202ENST00000357943 ECE2O60344 883 aa18.23■□□□□ 0.51
CCNE1-202ENST00000357943 DCAF8Q5TAQ9 597 aa18.23■□□□□ 0.51
CCNE1-202ENST00000357943 SKAP1Q86WV1 359 aa18.23■□□□□ 0.51
CCNE1-202ENST00000357943 SALL3Q9BXA9 1300 aa18.23■□□□□ 0.51
CCNE1-202ENST00000357943 DCAF8L1A6NGE4 600 aa18.22■□□□□ 0.51
CCNE1-202ENST00000357943 YDJCA8MPS7 323 aa18.22■□□□□ 0.51
CCNE1-202ENST00000357943 PDE4AP27815 886 aa18.22■□□□□ 0.51
CCNE1-202ENST00000357943 CCDC158Q5M9N0 1113 aa18.22■□□□□ 0.51
CCNE1-202ENST00000357943 TSHZ3Q63HK5 1081 aa18.22■□□□□ 0.51
CCNE1-202ENST00000357943 JDP2Q8WYK2 163 aa18.22■□□□□ 0.51
CCNE1-202ENST00000357943 KCNQ5Q9NR82 932 aa18.22■□□□□ 0.51
CCNE1-202ENST00000357943 RNF181Q9P0P0 153 aa18.22■□□□□ 0.51
CCNE1-202ENST00000357943 IL1R1P14778 569 aa18.21■□□□□ 0.51
CCNE1-202ENST00000357943 TTC39AQ5SRH9 613 aa18.21■□□□□ 0.51
CCNE1-202ENST00000357943 C9orf131Q5VYM1 1079 aa18.21■□□□□ 0.51
CCNE1-202ENST00000357943 PODNQ7Z5L7 613 aa18.21■□□□□ 0.51
CCNE1-202ENST00000357943 NIM1KQ8IY84 436 aa18.21■□□□□ 0.51
CCNE1-202ENST00000357943 MX1P20591 662 aa18.2■□□□□ 0.5
CCNE1-202ENST00000357943 SCARF1Q14162 830 aa18.2■□□□□ 0.5
CCNE1-202ENST00000357943 TDRD7Q8NHU6 1098 aaKnown RBP18.2■□□□□ 0.5
CCNE1-202ENST00000357943 ARID4AP29374 1257 aaPredicted RBP18.2■□□□□ 0.5
CCNE1-202ENST00000357943 ECHDC1Q9NTX5 307 aa18.2■□□□□ 0.5
CCNE1-202ENST00000357943 ZNRF3Q9ULT6 936 aa18.2■□□□□ 0.5
CCNE1-202ENST00000357943 JAG2Q9Y219 1238 aa18.2■□□□□ 0.5
CCNE1-202ENST00000357943 SBF1O95248 1867 aa18.19■□□□□ 0.5
CCNE1-202ENST00000357943 FRAT2O75474 233 aaPredicted RBP18.19■□□□□ 0.5
CCNE1-202ENST00000357943 MCAMP43121 646 aa18.19■□□□□ 0.5
CCNE1-202ENST00000357943 RASGRF1Q13972 1273 aa18.19■□□□□ 0.5
CCNE1-202ENST00000357943 PI16Q6UXB8 463 aa18.19■□□□□ 0.5
CCNE1-202ENST00000357943 PLEKHM2Q8IWE5 1019 aa18.19■□□□□ 0.5
CCNE1-202ENST00000357943 GNL3LQ9NVN8 582 aaKnown RBP18.19■□□□□ 0.5
CCNE1-202ENST00000357943 COL1A1P02452 1464 aaPredicted RBP18.18■□□□□ 0.5
CCNE1-202ENST00000357943 FZD9O00144 591 aa18.18■□□□□ 0.5
CCNE1-202ENST00000357943 PDE1AP54750 535 aa18.18■□□□□ 0.5
CCNE1-202ENST00000357943 ZNF512BQ96KM6 892 aaPredicted RBP18.18■□□□□ 0.5
CCNE1-202ENST00000357943 CCDC88AQ3V6T2 1871 aa18.18■□□□□ 0.5
CCNE1-202ENST00000357943 UQCRFS1P1P0C7P4 283 aa18.17■□□□□ 0.5
CCNE1-202ENST00000357943 ATP5JP18859 108 aa18.17■□□□□ 0.5
CCNE1-202ENST00000357943 GTF2IP78347 998 aa18.17■□□□□ 0.5
CCNE1-202ENST00000357943 PI4K2BQ8TCG2 481 aa18.17■□□□□ 0.5
CCNE1-202ENST00000357943 GPATCH3Q96I76 525 aa18.17■□□□□ 0.5
CCNE1-202ENST00000357943 HMG20BQ9P0W2 317 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms