RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 SALL3Q9BXA9 1300 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 SETD1BQ9UPS6 1966 aaKnown RBP7.93□□□□□ -1.14
RTN4-203ENST00000357376 RNF113AO15541 343 aaKnown RBP7.93□□□□□ -1.14
RTN4-203ENST00000357376 SYKP43405 635 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 EPHA10Q5JZY3 1008 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 SLC52A2Q9HAB3 445 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 GOLGA8AA7E2F4 631 aa7.92□□□□□ -1.14
RTN4-203ENST00000357376 CBFA2T2O43439 604 aa7.92□□□□□ -1.14
RTN4-203ENST00000357376 ALG1Q9BT22 464 aa7.92□□□□□ -1.14
RTN4-203ENST00000357376 DNAI1Q9UI46 699 aa7.92□□□□□ -1.14
RTN4-203ENST00000357376 REREQ9P2R6 1566 aa7.92□□□□□ -1.14
RTN4-203ENST00000357376 DLC1Q96QB1 1528 aa7.92□□□□□ -1.14
RTN4-203ENST00000357376 SYT10Q6XYQ8 523 aa7.92□□□□□ -1.14
RTN4-203ENST00000357376 SMAP1Q8IYB5 467 aaPredicted RBP7.92□□□□□ -1.14
RTN4-203ENST00000357376 KCNG4Q8TDN1 519 aa7.92□□□□□ -1.14
RTN4-203ENST00000357376 CPLX3Q8WVH0 158 aa7.92□□□□□ -1.14
RTN4-203ENST00000357376 NAPBQ9H115 298 aa7.92□□□□□ -1.14
RTN4-203ENST00000357376 ADCY9O60503 1353 aa7.92□□□□□ -1.14
RTN4-203ENST00000357376 USP31Q70CQ4 1352 aa7.92□□□□□ -1.14
RTN4-203ENST00000357376 IFIT3O14879 490 aaKnown RBP7.92□□□□□ -1.14
RTN4-203ENST00000357376 CCP110O43303 1012 aa7.92□□□□□ -1.14
RTN4-203ENST00000357376 A1BGP04217 495 aa7.92□□□□□ -1.14
RTN4-203ENST00000357376 TNNT3P45378 269 aaPredicted RBP7.92□□□□□ -1.14
RTN4-203ENST00000357376 UBASH3AP57075 661 aa7.92□□□□□ -1.14
RTN4-203ENST00000357376 TOB2Q14106 344 aaPredicted RBP7.92□□□□□ -1.14
RTN4-203ENST00000357376 C11orf57Q6ZUT1 292 aaPredicted RBP7.92□□□□□ -1.14
RTN4-203ENST00000357376 CACTINQ8WUQ7 758 aaKnown RBP7.92□□□□□ -1.14
RTN4-203ENST00000357376 SLC26A6Q9BXS9 759 aa7.92□□□□□ -1.14
RTN4-203ENST00000357376 TMEM131LA2VDJ0 1609 aa7.92□□□□□ -1.14
RTN4-203ENST00000357376 E7EWF7 191 aa7.91□□□□□ -1.14
RTN4-203ENST00000357376 KIF2AO00139 706 aaPredicted RBP7.91□□□□□ -1.14
RTN4-203ENST00000357376 POLR3GO15318 223 aaPredicted RBP7.91□□□□□ -1.14
RTN4-203ENST00000357376 IARSP41252 1262 aaKnown RBP7.91□□□□□ -1.14
RTN4-203ENST00000357376 ARID5BQ14865 1188 aa7.91□□□□□ -1.14
RTN4-203ENST00000357376 SLC9C2Q5TAH2 1124 aa7.91□□□□□ -1.14
RTN4-203ENST00000357376 MPHOSPH8Q99549 860 aa7.91□□□□□ -1.14
RTN4-203ENST00000357376 ZSWIM4Q9H7M6 989 aa7.91□□□□□ -1.14
RTN4-203ENST00000357376 ABCF2Q9UG63 623 aa7.91□□□□□ -1.14
RTN4-203ENST00000357376 IGKV5-2P06315 115 aa7.91□□□□□ -1.14
RTN4-203ENST00000357376 TMEM67Q5HYA8 995 aa7.91□□□□□ -1.14
RTN4-203ENST00000357376 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.91□□□□□ -1.14
RTN4-203ENST00000357376 PCMTD1Q96MG8 357 aaPredicted RBP7.91□□□□□ -1.14
RTN4-203ENST00000357376 SLC12A7Q9Y666 1083 aa7.91□□□□□ -1.14
RTN4-203ENST00000357376 IFT172Q9UG01 1749 aa7.91□□□□□ -1.14
RTN4-203ENST00000357376 MINDY4BA8MYZ0 360 aa7.91□□□□□ -1.14
RTN4-203ENST00000357376 TSR1Q2NL82 804 aaKnown RBP7.91□□□□□ -1.14
RTN4-203ENST00000357376 TMCO3Q6UWJ1 677 aa7.91□□□□□ -1.14
RTN4-203ENST00000357376 FAM89AQ96GI7 184 aa7.91□□□□□ -1.14
RTN4-203ENST00000357376 TRERF1Q96PN7 1200 aa7.91□□□□□ -1.14
RTN4-203ENST00000357376 PREX1Q8TCU6 1659 aa7.91□□□□□ -1.14
RTN4-203ENST00000357376 XBP1P17861 261 aa7.9□□□□□ -1.14
RTN4-203ENST00000357376 ELF2Q15723 593 aa7.9□□□□□ -1.14
RTN4-203ENST00000357376 PPFIBP1Q86W92 1011 aa7.9□□□□□ -1.14
RTN4-203ENST00000357376 UBAC1Q9BSL1 405 aa7.9□□□□□ -1.14
RTN4-203ENST00000357376 TMOD3Q9NYL9 352 aa7.9□□□□□ -1.14
RTN4-203ENST00000357376 LRP2BPQ9P2M1 347 aa7.9□□□□□ -1.14
RTN4-203ENST00000357376 TRMT112Q9UI30 125 aaKnown RBP7.9□□□□□ -1.14
RTN4-203ENST00000357376 ELP1O95163 1332 aa7.9□□□□□ -1.14
RTN4-203ENST00000357376 EYA2O00167 538 aa7.9□□□□□ -1.14
RTN4-203ENST00000357376 SLU7O95391 586 aaKnown RBP7.9□□□□□ -1.14
RTN4-203ENST00000357376 ATP2B3Q16720 1220 aa7.9□□□□□ -1.14
RTN4-203ENST00000357376 LRRC24Q50LG9 513 aa7.9□□□□□ -1.14
RTN4-203ENST00000357376 CCDC150Q8NCX0 1101 aa7.9□□□□□ -1.14
RTN4-203ENST00000357376 ANKRD20A12PQ8NF67 263 aa7.9□□□□□ -1.14
RTN4-203ENST00000357376 HELBQ8NG08 1087 aaPredicted RBP7.9□□□□□ -1.14
RTN4-203ENST00000357376 DCAF5Q96JK2 942 aa7.9□□□□□ -1.14
RTN4-203ENST00000357376 PGBD1Q96JS3 809 aa7.9□□□□□ -1.14
RTN4-203ENST00000357376 NACAP1Q9BZK3 213 aa7.9□□□□□ -1.14
RTN4-203ENST00000357376 HELLSQ9NRZ9 838 aa7.9□□□□□ -1.14
RTN4-203ENST00000357376 CEP170BQ9Y4F5 1589 aaPredicted RBP7.9□□□□□ -1.14
RTN4-203ENST00000357376 KIF20BQ96Q89 1820 aa7.9□□□□□ -1.14
RTN4-203ENST00000357376 CCDC66A2RUB6 948 aa7.9□□□□□ -1.15
RTN4-203ENST00000357376 MAPK8IP2Q13387 824 aaPredicted RBP7.9□□□□□ -1.15
RTN4-203ENST00000357376 MTX1Q13505 466 aa7.9□□□□□ -1.15
RTN4-203ENST00000357376 SPECC1Q5M775 1068 aa7.9□□□□□ -1.15
RTN4-203ENST00000357376 TTLL7Q6ZT98 887 aa7.9□□□□□ -1.15
RTN4-203ENST00000357376 GOLGA6L1Q8N7Z2 621 aa7.9□□□□□ -1.15
RTN4-203ENST00000357376 PLBD2Q8NHP8 589 aa7.9□□□□□ -1.15
RTN4-203ENST00000357376 LLPHQ9BRT6 129 aaKnown RBP7.9□□□□□ -1.15
RTN4-203ENST00000357376 MYL10Q9BUA6 226 aa7.9□□□□□ -1.15
RTN4-203ENST00000357376 KCNF1Q9H3M0 494 aa7.9□□□□□ -1.15
RTN4-203ENST00000357376 HSPD1P10809 573 aaKnown RBP7.89□□□□□ -1.15
RTN4-203ENST00000357376 PTPN12Q05209 780 aaKnown RBP7.89□□□□□ -1.15
RTN4-203ENST00000357376 GPS2Q13227 327 aa7.89□□□□□ -1.15
RTN4-203ENST00000357376 NAA30Q147X3 362 aaPredicted RBP7.89□□□□□ -1.15
RTN4-203ENST00000357376 CCDC102BQ68D86 513 aa7.89□□□□□ -1.15
RTN4-203ENST00000357376 NAA16Q6N069 864 aaPredicted RBP7.89□□□□□ -1.15
RTN4-203ENST00000357376 KRT222Q8N1A0 295 aa7.89□□□□□ -1.15
RTN4-203ENST00000357376 GPHNQ9NQX3 736 aaPredicted RBP7.89□□□□□ -1.15
RTN4-203ENST00000357376 ZNF215Q9UL58 517 aaPredicted RBP7.89□□□□□ -1.15
RTN4-203ENST00000357376 ZBTB43O43298 467 aa7.89□□□□□ -1.15
RTN4-203ENST00000357376 GNG11P61952 73 aa7.89□□□□□ -1.15
RTN4-203ENST00000357376 PTPN21Q16825 1174 aa7.89□□□□□ -1.15
RTN4-203ENST00000357376 ARHGEF25Q86VW2 580 aa7.89□□□□□ -1.15
RTN4-203ENST00000357376 LRRC8AQ8IWT6 810 aa7.89□□□□□ -1.15
RTN4-203ENST00000357376 NSUN7Q8NE18 718 aaKnown RBP7.89□□□□□ -1.15
RTN4-203ENST00000357376 TDRD7Q8NHU6 1098 aaKnown RBP7.89□□□□□ -1.15
RTN4-203ENST00000357376 PHKBQ93100 1093 aa7.89□□□□□ -1.15
RTN4-203ENST00000357376 HAUS7Q99871 368 aa7.89□□□□□ -1.15
RTN4-203ENST00000357376 XPO4Q9C0E2 1151 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms