RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 CHAMP1Q96JM3 812 aa15.15■□□□□ 0.02
RTFDC1-202ENST00000357348 TSPY26PQ9H489 355 aa15.15■□□□□ 0.02
RTFDC1-202ENST00000357348 COL4A1P02462 1669 aa15.15■□□□□ 0.02
RTFDC1-202ENST00000357348 EYA2O00167 538 aa15.15■□□□□ 0.02
RTFDC1-202ENST00000357348 UVSSAQ2YD98 709 aa15.15■□□□□ 0.02
RTFDC1-202ENST00000357348 CCDC152Q4G0S7 254 aa15.15■□□□□ 0.02
RTFDC1-202ENST00000357348 EAF2Q96CJ1 260 aaPredicted RBP15.15■□□□□ 0.02
RTFDC1-202ENST00000357348 NLRP3Q96P20 1036 aa15.15■□□□□ 0.02
RTFDC1-202ENST00000357348 CNNM1Q9NRU3 951 aa15.15■□□□□ 0.02
RTFDC1-202ENST00000357348 TLR7Q9NYK1 1049 aaKnown RBP15.15■□□□□ 0.02
RTFDC1-202ENST00000357348 RGL2O15211 777 aa15.14■□□□□ 0.01
RTFDC1-202ENST00000357348 MX1P20591 662 aa15.14■□□□□ 0.01
RTFDC1-202ENST00000357348 RBM10P98175 930 aaKnown RBP15.14■□□□□ 0.01
RTFDC1-202ENST00000357348 TMEM87AQ8NBN3 555 aa15.14■□□□□ 0.01
RTFDC1-202ENST00000357348 FLAD1Q8NFF5 587 aa15.14■□□□□ 0.01
RTFDC1-202ENST00000357348 SYAP1Q96A49 352 aaPredicted RBP15.14■□□□□ 0.01
RTFDC1-202ENST00000357348 TNRC6CQ9HCJ0 1690 aaKnown RBP15.14■□□□□ 0.01
RTFDC1-202ENST00000357348 POLRMTO00411 1230 aaKnown RBP15.13■□□□□ 0.01
RTFDC1-202ENST00000357348 MMP10P09238 476 aa15.13■□□□□ 0.01
RTFDC1-202ENST00000357348 IFIT2P09913 472 aaKnown RBP15.13■□□□□ 0.01
RTFDC1-202ENST00000357348 STAP2Q9UGK3 403 aa15.13■□□□□ 0.01
RTFDC1-202ENST00000357348 MAP4K4O95819 1239 aaPredicted RBP15.13■□□□□ 0.01
RTFDC1-202ENST00000357348 MCCP23508 829 aa15.13■□□□□ 0.01
RTFDC1-202ENST00000357348 NLGN1Q8N2Q7 840 aa15.13■□□□□ 0.01
RTFDC1-202ENST00000357348 HELBQ8NG08 1087 aaPredicted RBP15.13■□□□□ 0.01
RTFDC1-202ENST00000357348 NEUROD6Q96NK8 337 aa15.13■□□□□ 0.01
RTFDC1-202ENST00000357348 TIMM10P62072 90 aa15.12■□□□□ 0.01
RTFDC1-202ENST00000357348 FAM184AQ8NB25 1140 aa15.12■□□□□ 0.01
RTFDC1-202ENST00000357348 MPHOSPH8Q99549 860 aa15.12■□□□□ 0.01
RTFDC1-202ENST00000357348 PALD1Q9ULE6 856 aa15.12■□□□□ 0.01
RTFDC1-202ENST00000357348 CHMLP26374 656 aa15.12■□□□□ 0.01
RTFDC1-202ENST00000357348 IL15P40933 162 aaPredicted RBP15.12■□□□□ 0.01
RTFDC1-202ENST00000357348 UPF1Q92900 1129 aaKnown RBP eCLIP15.12■□□□□ 0.014e-8■■■■■ 28.3
RTFDC1-202ENST00000357348 FAM13BQ9NYF5 915 aa15.12■□□□□ 0.01
RTFDC1-202ENST00000357348 HSP90B1P14625 803 aaKnown RBP15.11■□□□□ 0.01
RTFDC1-202ENST00000357348 TNNI3KQ59H18 835 aa15.11■□□□□ 0.01
RTFDC1-202ENST00000357348 METTL24Q5JXM2 366 aa15.11■□□□□ 0.01
RTFDC1-202ENST00000357348 SLC10A5Q5PT55 438 aa15.11■□□□□ 0.01
RTFDC1-202ENST00000357348 CCDC125Q86Z20 511 aa15.11■□□□□ 0.01
RTFDC1-202ENST00000357348 CELF1Q92879 486 aaKnown RBP15.11■□□□□ 0.01
RTFDC1-202ENST00000357348 FPGT-TNNI3KV9GXZ4 949 aa15.11■□□□□ 0.01
RTFDC1-202ENST00000357348 AOX1Q06278 1338 aa15.11■□□□□ 0.01
RTFDC1-202ENST00000357348 SNAP23O00161 211 aa15.11■□□□□ 0.01
RTFDC1-202ENST00000357348 TAF5LO75529 589 aa15.11■□□□□ 0.01
RTFDC1-202ENST00000357348 ST5P78524 1137 aa15.11■□□□□ 0.01
RTFDC1-202ENST00000357348 SLC51AQ86UW1 340 aa15.11■□□□□ 0.01
RTFDC1-202ENST00000357348 SRCAPQ6ZRS2 3230 aa15.1■□□□□ 0.01
RTFDC1-202ENST00000357348 IGHMBP2P38935 993 aaKnown RBP15.1■□□□□ 0.01
RTFDC1-202ENST00000357348 KIAA2012Q0VF49 1180 aa15.1■□□□□ 0.01
RTFDC1-202ENST00000357348 CEP126Q9P2H0 1117 aa15.1■□□□□ 0.01
RTFDC1-202ENST00000357348 RIPOR2Q9Y4F9 1068 aa15.1■□□□□ 0.01
RTFDC1-202ENST00000357348 PARP3Q9Y6F1 533 aa15.1■□□□□ 0.01
RTFDC1-202ENST00000357348 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.1■□□□□ 0.015e-6■■□□□ 11.7
RTFDC1-202ENST00000357348 SF3B3Q15393 1217 aaKnown RBP15.09■□□□□ 0.01
RTFDC1-202ENST00000357348 DBNDD2Q9BQY9 259 aa15.09■□□□□ 0.01
RTFDC1-202ENST00000357348 PRDM4Q9UKN5 801 aa15.09■□□□□ 0.01
RTFDC1-202ENST00000357348 TRIM6-TRIM34B2RNG4 842 aa15.09■□□□□ 0.01
RTFDC1-202ENST00000357348 CIAO1O76071 339 aa15.09■□□□□ 0.01
RTFDC1-202ENST00000357348 RNF214Q8ND24 703 aa15.09■□□□□ 0.01
RTFDC1-202ENST00000357348 RILPL2Q969X0 211 aa15.09■□□□□ 0.01
RTFDC1-202ENST00000357348 DBNLQ9UJU6 430 aaKnown RBP15.09■□□□□ 0.01
RTFDC1-202ENST00000357348 WDR33Q9C0J8 1336 aaKnown RBP15.09■□□□□ 0.01
RTFDC1-202ENST00000357348 RPAP1Q9BWH6 1393 aaPredicted RBP15.09■□□□□ 0.01
RTFDC1-202ENST00000357348 A0A1B0GUL7 405 aa15.08■□□□□ 0
RTFDC1-202ENST00000357348 ANKRD18AQ8IVF6 992 aa15.08■□□□□ 0
RTFDC1-202ENST00000357348 MYRIPQ8NFW9 859 aa15.08■□□□□ 0
RTFDC1-202ENST00000357348 NDUFB9Q9Y6M9 179 aa15.08■□□□□ 0
RTFDC1-202ENST00000357348 GTF2F1P35269 517 aaKnown RBP eCLIP15.08■□□□□ 0
RTFDC1-202ENST00000357348 FOXD4L5Q5VV16 416 aaPredicted RBP15.08■□□□□ 0
RTFDC1-202ENST00000357348 SMAP1Q8IYB5 467 aaPredicted RBP15.08■□□□□ 0
RTFDC1-202ENST00000357348 FOXD4L4Q8WXT5 416 aaPredicted RBP15.08■□□□□ 0
RTFDC1-202ENST00000357348 PIBF1Q8WXW3 757 aa15.08■□□□□ 0
RTFDC1-202ENST00000357348 CDC5LQ99459 802 aaKnown RBP15.08■□□□□ 0
RTFDC1-202ENST00000357348 RIC1Q4ADV7 1423 aa15.07■□□□□ 0
RTFDC1-202ENST00000357348 WTIPA6NIX2 430 aaPredicted RBP15.07■□□□□ 0
RTFDC1-202ENST00000357348 GADD45BO75293 160 aaPredicted RBP15.07■□□□□ 0
RTFDC1-202ENST00000357348 DDX46Q7L014 1031 aaKnown RBP15.07■□□□□ 0
RTFDC1-202ENST00000357348 USP48Q86UV5 1035 aa15.07■□□□□ 0
RTFDC1-202ENST00000357348 PRIMPOLQ96LW4 560 aa15.07■□□□□ 0
RTFDC1-202ENST00000357348 LETM1O95202 739 aaPredicted RBP15.07■□□□□ 0
RTFDC1-202ENST00000357348 ZBTB7AO95365 584 aa15.07■□□□□ 0
RTFDC1-202ENST00000357348 ADORA1P30542 326 aa15.07■□□□□ 0
RTFDC1-202ENST00000357348 HSPA4P34932 840 aa15.07■□□□□ 0
RTFDC1-202ENST00000357348 R3HDM1Q15032 1099 aaKnown RBP15.07■□□□□ 0
RTFDC1-202ENST00000357348 PI4K2BQ8TCG2 481 aa15.07■□□□□ 0
RTFDC1-202ENST00000357348 RPGRQ92834 1020 aaKnown RBP15.07■□□□□ 0
RTFDC1-202ENST00000357348 BOLA2Q9H3K6 86 aa15.07■□□□□ 0
RTFDC1-202ENST00000357348 ECHDC1Q9NTX5 307 aa15.07■□□□□ 0
RTFDC1-202ENST00000357348 ANKRD31Q8N7Z5 1873 aa15.06■□□□□ 0
RTFDC1-202ENST00000357348 PSDA5PKW4 1024 aaPredicted RBP15.06■□□□□ 0
RTFDC1-202ENST00000357348 RPS8P62241 208 aaKnown RBP15.05■□□□□ 0
RTFDC1-202ENST00000357348 CHRNDQ07001 517 aa15.05■□□□□ 0
RTFDC1-202ENST00000357348 CCDC183Q5T5S1 534 aa15.05■□□□□ 0
RTFDC1-202ENST00000357348 ANO2Q9NQ90 1003 aa15.05■□□□□ 0
RTFDC1-202ENST00000357348 SPTLC3Q9NUV7 552 aa15.05■□□□□ 0
RTFDC1-202ENST00000357348 QSER1Q2KHR3 1735 aa15.05■□□□□ -0
RTFDC1-202ENST00000357348 PDE8BO95263 885 aa15.05■□□□□ -0
RTFDC1-202ENST00000357348 ATP2B3Q16720 1220 aa15.05■□□□□ -0
RTFDC1-202ENST00000357348 GPATCH3Q96I76 525 aa15.05■□□□□ -0
RTFDC1-202ENST00000357348 ZNF609O15014 1411 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms