RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 DBNLQ9UJU6 430 aaKnown RBP9.59□□□□□ -0.87
CDC42SE1-201ENST00000357235 FER1L4A9Z1Z3 1794 aa9.59□□□□□ -0.87
CDC42SE1-201ENST00000357235 PTPDC1A2A3K4 754 aa9.59□□□□□ -0.87
CDC42SE1-201ENST00000357235 RNMTO43148 476 aaKnown RBP9.59□□□□□ -0.87
CDC42SE1-201ENST00000357235 RBM6P78332 1123 aaKnown RBP9.59□□□□□ -0.87
CDC42SE1-201ENST00000357235 TEX35Q5T0J7 233 aa9.59□□□□□ -0.87
CDC42SE1-201ENST00000357235 COPS6Q7L5N1 327 aa9.59□□□□□ -0.87
CDC42SE1-201ENST00000357235 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE1-201ENST00000357235 IP6K1Q92551 441 aa9.59□□□□□ -0.87
CDC42SE1-201ENST00000357235 DBNDD2Q9BQY9 259 aa9.59□□□□□ -0.87
CDC42SE1-201ENST00000357235 BRMS1Q9HCU9 246 aa9.59□□□□□ -0.87
CDC42SE1-201ENST00000357235 HOXB7P09629 217 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 CEP57L1Q8IYX8 460 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 XAGE3Q8WTP9 111 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 ZSCAN16Q9H4T2 348 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 RGPD1P0DJD0 1748 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 A0A0G2JLW4 131 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 GOLIM4O00461 696 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 IGKV5-2P06315 115 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 SYT10Q6XYQ8 523 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 HOMER1Q86YM7 354 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 TXLNBQ8N3L3 684 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 GPATCH11Q8N954 259 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 TOMM22Q9NS69 142 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 PHF8Q9UPP1 1060 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 FAM208AQ9UK61 1670 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 GUCY2CP25092 1073 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 BMS1Q14692 1282 aaKnown RBP9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 IQCB1Q15051 598 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 EP400NLQ6ZTU2 488 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 GOLGA6L1Q8N7Z2 621 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 ANO10Q9NW15 660 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 CEMIPQ8WUJ3 1361 aa9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 NPHP4O75161 1426 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE1-201ENST00000357235 MYO1CO00159 1063 aa9.57□□□□□ -0.88
CDC42SE1-201ENST00000357235 GYS2P54840 703 aa9.57□□□□□ -0.88
CDC42SE1-201ENST00000357235 MCMDC2Q4G0Z9 681 aa9.57□□□□□ -0.88
CDC42SE1-201ENST00000357235 MUM1L1Q5H9M0 696 aa9.57□□□□□ -0.88
CDC42SE1-201ENST00000357235 TUBGCP6Q96RT7 1819 aa9.57□□□□□ -0.88
CDC42SE1-201ENST00000357235 HAND2P61296 217 aa9.57□□□□□ -0.88
CDC42SE1-201ENST00000357235 PTPN21Q16825 1174 aa9.57□□□□□ -0.88
CDC42SE1-201ENST00000357235 TNNI3KQ59H18 835 aa9.57□□□□□ -0.88
CDC42SE1-201ENST00000357235 FBXO38Q6PIJ6 1188 aa9.57□□□□□ -0.88
CDC42SE1-201ENST00000357235 TMC6Q7Z403 805 aa9.57□□□□□ -0.88
CDC42SE1-201ENST00000357235 FAM177A1Q8N128 213 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE1-201ENST00000357235 CEP83Q9Y592 693 aa9.57□□□□□ -0.88
CDC42SE1-201ENST00000357235 U3KPZ7 1027 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE1-201ENST00000357235 FPGT-TNNI3KV9GXZ4 949 aa9.57□□□□□ -0.88
CDC42SE1-201ENST00000357235 TRIM66O15016 1216 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 KRBA2Q6ZNG9 492 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 RBM43Q6ZSC3 357 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 STOX1Q6ZVD7 989 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 NEK11Q8NG66 645 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 COL15A1P39059 1388 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 MED23Q9ULK4 1368 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 PLEKHG1Q9ULL1 1385 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 TIMM10P62072 90 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 SNW1Q13573 536 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 GCKRQ14397 625 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 STK38Q15208 465 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 CT47A1Q5JQC4 288 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 NSUN7Q8NE18 718 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 NAT10Q9H0A0 1025 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 DDX21Q9NR30 783 aaKnown RBP eCLIP9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 GJB4Q9NTQ9 266 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 IFNKQ9P0W0 207 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 A0A087WZG4 1122 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 NEURL1BA8MQ27 555 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 FAM160A1Q05DH4 1040 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 ERCC6LQ2NKX8 1250 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 DPCR1Q3MIW9 517 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 DHX40Q8IX18 779 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 MRFAP1L1Q96HT8 127 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 ZNF396Q96N95 335 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 GPHNQ9NQX3 736 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 ZNF446Q9NWS9 450 aa9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 CWC15Q9P013 229 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-201ENST00000357235 CTAGE5O15320 804 aa9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 CAVIN2O95810 425 aa9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 CCDC172P0C7W6 258 aa9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 LMOD1P29536 600 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 HSP90AA4PQ58FG1 418 aa9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 TTLL5Q6EMB2 1281 aa9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 DHX32Q7L7V1 743 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 CCAR2Q8N163 923 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 NFATC2IPQ8NCF5 419 aa9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 ANKRD24Q8TF21 1146 aa9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 CARD10Q9BWT7 1032 aa9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 JRKLQ9Y4A0 524 aa9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 SFPQP23246 707 aaKnown RBP eCLIP9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 ZC3H6P61129 1189 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 FKBP4Q02790 459 aaKnown RBP eCLIP9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 GPS2Q13227 327 aa9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 AMOTQ4VCS5 1084 aa9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 HSP90AB3PQ58FF7 597 aa9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 ANKRD13DQ6ZTN6 518 aa9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 CCDC191Q8NCU4 936 aa9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 XPO4Q9C0E2 1151 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-201ENST00000357235 TBX22Q9Y458 520 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms