RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 SAMD7Q7Z3H4 446 aa21.55■■□□□ 1.04
NCL-202ENST00000356936 TXNRD3Q86VQ6 643 aa21.55■■□□□ 1.04
NCL-202ENST00000356936 ANKRD44Q8N8A2 993 aa21.55■■□□□ 1.04
NCL-202ENST00000356936 JMYQ8N9B5 988 aa21.55■■□□□ 1.04
NCL-202ENST00000356936 HELBQ8NG08 1087 aaPredicted RBP21.55■■□□□ 1.04
NCL-202ENST00000356936 ZBED9Q6R2W3 1325 aa21.55■■□□□ 1.04
NCL-202ENST00000356936 MYO3BQ8WXR4 1341 aa21.55■■□□□ 1.04
NCL-202ENST00000356936 SHTN1A0MZ66 631 aa21.54■■□□□ 1.04
NCL-202ENST00000356936 UBTFL1P0CB47 393 aaPredicted RBP21.54■■□□□ 1.04
NCL-202ENST00000356936 MROH5Q6ZUA9 1318 aa21.54■■□□□ 1.04
NCL-202ENST00000356936 PLIN1O60240 522 aa21.53■■□□□ 1.04
NCL-202ENST00000356936 USP17L8P0C7I0 530 aa21.53■■□□□ 1.04
NCL-202ENST00000356936 MMP14P50281 582 aa21.53■■□□□ 1.04
NCL-202ENST00000356936 KIF4BQ2VIQ3 1234 aa21.53■■□□□ 1.04
NCL-202ENST00000356936 TBC1D10BQ4KMP7 808 aaPredicted RBP21.53■■□□□ 1.04
NCL-202ENST00000356936 CDC37L1Q7L3B6 337 aa21.53■■□□□ 1.04
NCL-202ENST00000356936 ZNF804AQ7Z570 1209 aa21.53■■□□□ 1.04
NCL-202ENST00000356936 FBXW7Q969H0 707 aa21.53■■□□□ 1.04
NCL-202ENST00000356936 SCN9AQ15858 1988 aa21.52■■□□□ 1.04
NCL-202ENST00000356936 KLRK1P26718 216 aa21.52■■□□□ 1.04
NCL-202ENST00000356936 ZNF280AP59817 542 aaPredicted RBP21.52■■□□□ 1.04
NCL-202ENST00000356936 UBE4AQ14139 1066 aa21.52■■□□□ 1.04
NCL-202ENST00000356936 DACT2Q5SW24 774 aa21.52■■□□□ 1.04
NCL-202ENST00000356936 RBM26Q5T8P6 1007 aaKnown RBP21.52■■□□□ 1.04
NCL-202ENST00000356936 OGFOD1Q8N543 542 aa21.52■■□□□ 1.04
NCL-202ENST00000356936 GMLQ99445 158 aa21.52■■□□□ 1.04
NCL-202ENST00000356936 INTS3Q68E01 1043 aaKnown RBP21.51■■□□□ 1.03
NCL-202ENST00000356936 TTLL5Q6EMB2 1281 aa21.51■■□□□ 1.03
NCL-202ENST00000356936 CD209Q9NNX6 404 aa21.51■■□□□ 1.03
NCL-202ENST00000356936 RIPOR2Q9Y4F9 1068 aa21.51■■□□□ 1.03
NCL-202ENST00000356936 PSME4Q14997 1843 aa21.5■■□□□ 1.03
NCL-202ENST00000356936 CNTNAP1P78357 1384 aa21.5■■□□□ 1.03
NCL-202ENST00000356936 TRAF5O00463 557 aa21.5■■□□□ 1.03
NCL-202ENST00000356936 ATF7IPQ6VMQ6 1270 aa21.5■■□□□ 1.03
NCL-202ENST00000356936 FRAT1Q92837 279 aaPredicted RBP21.5■■□□□ 1.03
NCL-202ENST00000356936 DCPSQ96C86 337 aaKnown RBP21.5■■□□□ 1.03
NCL-202ENST00000356936 PUS3Q9BZE2 481 aaKnown RBP21.5■■□□□ 1.03
NCL-202ENST00000356936 MKRN1Q9UHC7 482 aaKnown RBP21.5■■□□□ 1.03
NCL-202ENST00000356936 ABT1Q9ULW3 272 aaKnown RBP21.5■■□□□ 1.03
NCL-202ENST00000356936 IRS2Q9Y4H2 1338 aa21.5■■□□□ 1.03
NCL-202ENST00000356936 SNAP23O00161 211 aa21.49■■□□□ 1.03
NCL-202ENST00000356936 BCAR3O75815 825 aa21.49■■□□□ 1.03
NCL-202ENST00000356936 EGFRP00533 1210 aa21.49■■□□□ 1.03
NCL-202ENST00000356936 GLIS2Q9BZE0 524 aaPredicted RBP21.49■■□□□ 1.03
NCL-202ENST00000356936 MYOZ2Q9NPC6 264 aa21.49■■□□□ 1.03
NCL-202ENST00000356936 GNAI3P08754 354 aa21.48■■□□□ 1.03
NCL-202ENST00000356936 TRIM27P14373 513 aa21.48■■□□□ 1.03
NCL-202ENST00000356936 IL1R1P14778 569 aa21.48■■□□□ 1.03
NCL-202ENST00000356936 GTF2IP78347 998 aa21.48■■□□□ 1.03
NCL-202ENST00000356936 METTL24Q5JXM2 366 aa21.48■■□□□ 1.03
NCL-202ENST00000356936 RASSF10A6NK89 507 aa21.47■■□□□ 1.03
NCL-202ENST00000356936 DEFB115Q30KQ5 88 aa21.47■■□□□ 1.03
NCL-202ENST00000356936 KRT26Q7Z3Y9 468 aa21.47■■□□□ 1.03
NCL-202ENST00000356936 HDAC9Q9UKV0 1011 aa21.47■■□□□ 1.03
NCL-202ENST00000356936 A0A1B0GUL6 1792 aa21.46■■□□□ 1.03
NCL-202ENST00000356936 CELF2O95319 508 aaKnown RBP21.46■■□□□ 1.03
NCL-202ENST00000356936 LRRC24Q50LG9 513 aa21.46■■□□□ 1.03
NCL-202ENST00000356936 CST9Q5W186 159 aa21.46■■□□□ 1.03
NCL-202ENST00000356936 ZKSCAN2Q63HK3 967 aa21.46■■□□□ 1.03
NCL-202ENST00000356936 USP48Q86UV5 1035 aa21.46■■□□□ 1.03
NCL-202ENST00000356936 SULF1Q8IWU6 871 aa21.46■■□□□ 1.03
NCL-202ENST00000356936 FBXO3Q9UK99 471 aa21.46■■□□□ 1.03
NCL-202ENST00000356936 PDE8BO95263 885 aa21.45■■□□□ 1.02
NCL-202ENST00000356936 HIBADHP31937 336 aaKnown RBP21.45■■□□□ 1.02
NCL-202ENST00000356936 FMR1Q06787 632 aaKnown RBP eCLIP21.45■■□□□ 1.023e-7■■□□□ 13.5
NCL-202ENST00000356936 SCARF1Q14162 830 aa21.45■■□□□ 1.02
NCL-202ENST00000356936 MEIS3Q99687 375 aa21.45■■□□□ 1.02
NCL-202ENST00000356936 MXD3Q9BW11 206 aa21.45■■□□□ 1.02
NCL-202ENST00000356936 GGA3Q9NZ52 723 aa21.45■■□□□ 1.02
NCL-202ENST00000356936 LRRFIP2Q9Y608 721 aaKnown RBP21.45■■□□□ 1.02
NCL-202ENST00000356936 SASH1O94885 1247 aa21.44■■□□□ 1.02
NCL-202ENST00000356936 RFX5P48382 616 aaPredicted RBP21.44■■□□□ 1.02
NCL-202ENST00000356936 FKBP1AP62942 108 aaKnown RBP21.44■■□□□ 1.02
NCL-202ENST00000356936 CAVIN4Q5BKX8 364 aa21.44■■□□□ 1.02
NCL-202ENST00000356936 VPS37DQ86XT2 251 aa21.44■■□□□ 1.02
NCL-202ENST00000356936 KLHDC4Q8TBB5 520 aa21.44■■□□□ 1.02
NCL-202ENST00000356936 TLL2Q9Y6L7 1015 aa21.44■■□□□ 1.02
NCL-202ENST00000356936 EYA2O00167 538 aa21.43■■□□□ 1.02
NCL-202ENST00000356936 PTPN12Q05209 780 aaKnown RBP21.43■■□□□ 1.02
NCL-202ENST00000356936 ZNF408Q9H9D4 720 aa21.43■■□□□ 1.02
NCL-202ENST00000356936 PITPNM2Q9BZ72 1349 aa21.43■■□□□ 1.02
NCL-202ENST00000356936 CIAO1O76071 339 aa21.42■■□□□ 1.02
NCL-202ENST00000356936 GYG1P46976 350 aa21.42■■□□□ 1.02
NCL-202ENST00000356936 VEGFBP49765 207 aa21.42■■□□□ 1.02
NCL-202ENST00000356936 PUM3Q15397 648 aaKnown RBP21.42■■□□□ 1.02
NCL-202ENST00000356936 ANGEL2Q5VTE6 544 aaKnown RBP21.42■■□□□ 1.02
NCL-202ENST00000356936 KIAA0825Q8IV33 1275 aa21.42■■□□□ 1.02
NCL-202ENST00000356936 VGLL2Q8N8G2 317 aa21.42■■□□□ 1.02
NCL-202ENST00000356936 TDRD7Q8NHU6 1098 aaKnown RBP21.42■■□□□ 1.02
NCL-202ENST00000356936 CLUAP1Q96AJ1 413 aa21.42■■□□□ 1.02
NCL-202ENST00000356936 FAM84BQ96KN1 310 aaPredicted RBP21.42■■□□□ 1.02
NCL-202ENST00000356936 TRPM7Q96QT4 1865 aa21.41■■□□□ 1.02
NCL-202ENST00000356936 IFIT1P09914 478 aaKnown RBP21.41■■□□□ 1.02
NCL-202ENST00000356936 ECE1P42892 770 aa21.41■■□□□ 1.02
NCL-202ENST00000356936 FAM205AQ6ZU69 1335 aa21.4■■□□□ 1.02
NCL-202ENST00000356936 ADM5C9JUS6 153 aa21.4■■□□□ 1.02
NCL-202ENST00000356936 SAPCD2Q86UD0 394 aa21.4■■□□□ 1.02
NCL-202ENST00000356936 HHIPL1Q96JK4 782 aa21.4■■□□□ 1.02
NCL-202ENST00000356936 ZNF646O15015 1829 aaPredicted RBP21.39■■□□□ 1.02
NCL-202ENST00000356936 ASTN2O75129 1339 aaPredicted RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms