RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ZNF608Q9ULD9 1512 aaPredicted RBP6.29□□□□□ -1.4
PTPRD-202ENST00000356435 EIF4G3O43432 1585 aaKnown RBP6.29□□□□□ -1.4
PTPRD-202ENST00000356435 CEP170Q5SW79 1584 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 SMARCA5O60264 1052 aaPredicted RBP6.29□□□□□ -1.4
PTPRD-202ENST00000356435 GAS8O95995 478 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 CYP7A1P22680 504 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 GNAT2P19087 354 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 DDB1Q16531 1140 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 RRAGBQ5VZM2 374 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 CCDC144CPQ8IYA2 1237 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 PDLIM2Q96JY6 352 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 CCDC77Q9BR77 488 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 ABCC10Q5T3U5 1492 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 PRDM15P57071 1507 aaPredicted RBP6.29□□□□□ -1.4
PTPRD-202ENST00000356435 TCHPQ9BT92 498 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 PICK1Q9NRD5 415 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 TMOD4Q9NZQ9 345 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 EMILIN1Q9Y6C2 1016 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 ANKRD36BQ8N2N9 1353 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 YEATS2Q9ULM3 1422 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 ATP2A2P16615 1042 aaKnown RBP6.29□□□□□ -1.4
PTPRD-202ENST00000356435 NAA16Q6N069 864 aaPredicted RBP6.29□□□□□ -1.4
PTPRD-202ENST00000356435 CEP83Q9Y592 693 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 PLXNC1O60486 1568 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 SLC8A3P57103 927 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 CTR9Q6PD62 1173 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 CCDC102BQ68D86 513 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 LMBR1Q8WVP7 490 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 ARHGAP45Q92619 1136 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 JADE2Q9NQC1 790 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 CAVIN2O95810 425 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 EEF2P13639 858 aaKnown RBP6.29□□□□□ -1.4
PTPRD-202ENST00000356435 CCT2P78371 535 aaKnown RBP6.29□□□□□ -1.4
PTPRD-202ENST00000356435 ZCRB1Q8TBF4 217 aaKnown RBP6.29□□□□□ -1.4
PTPRD-202ENST00000356435 CPLX3Q8WVH0 158 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 GOLGA1Q92805 767 aa6.29□□□□□ -1.4
PTPRD-202ENST00000356435 POLR3GO15318 223 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-202ENST00000356435 GSTA5Q7RTV2 222 aa6.28□□□□□ -1.4
PTPRD-202ENST00000356435 CCDC50Q8IVM0 306 aa6.28□□□□□ -1.4
PTPRD-202ENST00000356435 HOMEZQ8IX15 550 aa6.28□□□□□ -1.4
PTPRD-202ENST00000356435 TTC14Q96N46 770 aa6.28□□□□□ -1.4
PTPRD-202ENST00000356435 FMNL3Q8IVF7 1028 aa6.28□□□□□ -1.4
PTPRD-202ENST00000356435 THUMPD2Q9BTF0 503 aaKnown RBP6.28□□□□□ -1.4
PTPRD-202ENST00000356435 RTCBQ9Y3I0 505 aaKnown RBP6.28□□□□□ -1.4
PTPRD-202ENST00000356435 RNF187Q5TA31 235 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-202ENST00000356435 SPAG1Q07617 926 aa6.28□□□□□ -1.4
PTPRD-202ENST00000356435 DPH6Q7L8W6 267 aa6.28□□□□□ -1.4
PTPRD-202ENST00000356435 ORC3Q9UBD5 711 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-202ENST00000356435 MAGEB6P1A0A0J9YX57 407 aa6.28□□□□□ -1.4
PTPRD-202ENST00000356435 AKR1B10O60218 316 aa6.28□□□□□ -1.4
PTPRD-202ENST00000356435 GUCY1B3Q02153 619 aa6.28□□□□□ -1.4
PTPRD-202ENST00000356435 RTN1Q16799 776 aa6.28□□□□□ -1.4
PTPRD-202ENST00000356435 TPTE2Q6XPS3 522 aa6.28□□□□□ -1.4
PTPRD-202ENST00000356435 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-202ENST00000356435 GJB2P29033 226 aa6.28□□□□□ -1.4
PTPRD-202ENST00000356435 ASIC1P78348 528 aa6.28□□□□□ -1.4
PTPRD-202ENST00000356435 MXRA7P84157 204 aa6.28□□□□□ -1.4
PTPRD-202ENST00000356435 TMC6Q7Z403 805 aa6.28□□□□□ -1.4
PTPRD-202ENST00000356435 HAUS2Q9NVX0 235 aa6.28□□□□□ -1.4
PTPRD-202ENST00000356435 TIGD1Q96MW7 591 aa6.28□□□□□ -1.4
PTPRD-202ENST00000356435 CGNQ9P2M7 1197 aaKnown RBP6.28□□□□□ -1.4
PTPRD-202ENST00000356435 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.28□□□□□ -1.4
PTPRD-202ENST00000356435 V9GYY5 206 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-202ENST00000356435 GJC1P36383 396 aa6.27□□□□□ -1.4
PTPRD-202ENST00000356435 ATP2B3Q16720 1220 aa6.27□□□□□ -1.4
PTPRD-202ENST00000356435 ACSBG1Q96GR2 724 aa6.27□□□□□ -1.4
PTPRD-202ENST00000356435 SELENOOQ9BVL4 669 aa6.27□□□□□ -1.4
PTPRD-202ENST00000356435 NOC2LQ9Y3T9 749 aaKnown RBP6.27□□□□□ -1.4
PTPRD-202ENST00000356435 ATP5J2-PTCD1G3V325 749 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 BIRC2Q13490 618 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 BMS1Q14692 1282 aaKnown RBP6.27□□□□□ -1.41
PTPRD-202ENST00000356435 MAP7D1Q3KQU3 841 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 CEP135Q66GS9 1140 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 GPHNQ9NQX3 736 aaPredicted RBP6.27□□□□□ -1.41
PTPRD-202ENST00000356435 SNRKQ9NRH2 765 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 NIP7Q9Y221 180 aaKnown RBP eCLIP6.27□□□□□ -1.41
PTPRD-202ENST00000356435 REREQ9P2R6 1566 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 PCDH11XQ9BZA7 1347 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 PCDH11YQ9BZA8 1340 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 HSF2BPO75031 334 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 MPNDQ8N594 471 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 IVNS1ABPQ9Y6Y0 642 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 ARHGEF5Q12774 1597 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 MAST3O60307 1309 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 BACH1O14867 736 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 HAND2P61296 217 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 RBM26Q5T8P6 1007 aaKnown RBP6.27□□□□□ -1.41
PTPRD-202ENST00000356435 NEK1Q96PY6 1258 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 PLB1Q6P1J6 1458 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 BICDL2A1A5D9 508 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 IL2RBP14784 551 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 ALDH3A1P30838 453 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 CCDC63Q8NA47 563 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 CRCPO75575 148 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 URI1O94763 535 aaPredicted RBP6.27□□□□□ -1.41
PTPRD-202ENST00000356435 TCIRG1Q13488 830 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 SMC6Q96SB8 1091 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 NOS1P29475 1434 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 N4BP3O15049 544 aa6.27□□□□□ -1.41
PTPRD-202ENST00000356435 ZBTB43O43298 467 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms