RNA–Protein interactions for RNA: ENST00000356146.5

CDKL1-202, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best)

Gene CDKL1, Length 2,982 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-202ENST00000356146 USP28Q96RU2 1077 aa16.02■□□□□ 0.16
CDKL1-202ENST00000356146 DBNDD2Q9BQY9 259 aa16.02■□□□□ 0.16
CDKL1-202ENST00000356146 NAT10Q9H0A0 1025 aaKnown RBP16.02■□□□□ 0.16
CDKL1-202ENST00000356146 ERBB3P21860 1342 aa16.02■□□□□ 0.15
CDKL1-202ENST00000356146 KCNJ6P48051 423 aa16.02■□□□□ 0.15
CDKL1-202ENST00000356146 CCDC129Q6ZRS4 1044 aa16.02■□□□□ 0.15
CDKL1-202ENST00000356146 DDX41Q9UJV9 622 aaKnown RBP16.02■□□□□ 0.15
CDKL1-202ENST00000356146 ZMYM1Q5SVZ6 1142 aa16.01■□□□□ 0.15
CDKL1-202ENST00000356146 GLI3P10071 1580 aa16.01■□□□□ 0.15
CDKL1-202ENST00000356146 BECN2A8MW95 431 aa16.01■□□□□ 0.15
CDKL1-202ENST00000356146 GABPB1Q06547 395 aaPredicted RBP16.01■□□□□ 0.15
CDKL1-202ENST00000356146 SLFNL1Q499Z3 407 aa16.01■□□□□ 0.15
CDKL1-202ENST00000356146 SEC62Q99442 399 aaKnown RBP16.01■□□□□ 0.15
CDKL1-202ENST00000356146 RTEL1Q9NZ71 1219 aa16.01■□□□□ 0.15
CDKL1-202ENST00000356146 FMR1NBQ8N0W7 255 aaPredicted RBP16■□□□□ 0.15
CDKL1-202ENST00000356146 MORC2Q9Y6X9 1032 aaPredicted RBP16■□□□□ 0.15
CDKL1-202ENST00000356146 RGPD5Q99666 1765 aa16■□□□□ 0.15
CDKL1-202ENST00000356146 SNRPA1P09661 255 aaKnown RBP16■□□□□ 0.15
CDKL1-202ENST00000356146 SKILP12757 684 aa16■□□□□ 0.15
CDKL1-202ENST00000356146 ADALQ6DHV7 355 aa16■□□□□ 0.15
CDKL1-202ENST00000356146 ILDR1Q86SU0 546 aaPredicted RBP16■□□□□ 0.15
CDKL1-202ENST00000356146 DNAJC2Q99543 621 aaKnown RBP16■□□□□ 0.15
CDKL1-202ENST00000356146 CCDC69A6NI79 296 aa15.99■□□□□ 0.15
CDKL1-202ENST00000356146 FGD1P98174 961 aa15.99■□□□□ 0.15
CDKL1-202ENST00000356146 PTPN14Q15678 1187 aa15.99■□□□□ 0.15
CDKL1-202ENST00000356146 AXIN2Q9Y2T1 843 aa15.99■□□□□ 0.15
CDKL1-202ENST00000356146 CARMIL3Q8ND23 1372 aa15.99■□□□□ 0.15
CDKL1-202ENST00000356146 DDX60Q8IY21 1712 aaKnown RBP15.99■□□□□ 0.15
CDKL1-202ENST00000356146 TUBB4AP04350 444 aa15.99■□□□□ 0.15
CDKL1-202ENST00000356146 MYL6BP14649 208 aa15.99■□□□□ 0.15
CDKL1-202ENST00000356146 PHKG2P15735 406 aa15.99■□□□□ 0.15
CDKL1-202ENST00000356146 CCAR2Q8N163 923 aaKnown RBP15.99■□□□□ 0.15
CDKL1-202ENST00000356146 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.99■□□□□ 0.15
CDKL1-202ENST00000356146 MRPS27Q92552 414 aaKnown RBP15.99■□□□□ 0.15
CDKL1-202ENST00000356146 SPDYE4A6NLX3 237 aa15.99■□□□□ 0.15
CDKL1-202ENST00000356146 FSIP1Q8NA03 581 aa15.99■□□□□ 0.15
CDKL1-202ENST00000356146 PDIA3P30101 505 aaKnown RBP15.98■□□□□ 0.15
CDKL1-202ENST00000356146 APOBRQ0VD83 1088 aa15.98■□□□□ 0.15
CDKL1-202ENST00000356146 DDX46Q7L014 1031 aaKnown RBP15.98■□□□□ 0.15
CDKL1-202ENST00000356146 ZNF397Q8NF99 534 aaPredicted RBP15.98■□□□□ 0.15
CDKL1-202ENST00000356146 ERO1AQ96HE7 468 aa15.98■□□□□ 0.15
CDKL1-202ENST00000356146 ZNF496Q96IT1 587 aaPredicted RBP15.98■□□□□ 0.15
CDKL1-202ENST00000356146 PAG1Q9NWQ8 432 aa15.98■□□□□ 0.15
CDKL1-202ENST00000356146 PKD1L3Q7Z443 1732 aa15.98■□□□□ 0.15
CDKL1-202ENST00000356146 PARP4Q9UKK3 1724 aaKnown RBP15.98■□□□□ 0.15
CDKL1-202ENST00000356146 ALS2Q96Q42 1657 aa15.98■□□□□ 0.15
CDKL1-202ENST00000356146 E7EWF7 191 aa15.98■□□□□ 0.15
CDKL1-202ENST00000356146 SLC39A6Q13433 755 aa15.98■□□□□ 0.15
CDKL1-202ENST00000356146 UBE3BQ7Z3V4 1068 aa15.98■□□□□ 0.15
CDKL1-202ENST00000356146 YEATS4O95619 227 aa15.97■□□□□ 0.15
CDKL1-202ENST00000356146 ANKLE2Q86XL3 938 aa15.97■□□□□ 0.15
CDKL1-202ENST00000356146 PLBD2Q8NHP8 589 aa15.97■□□□□ 0.15
CDKL1-202ENST00000356146 LRRC2Q9BYS8 371 aa15.97■□□□□ 0.15
CDKL1-202ENST00000356146 FAM53CQ9NYF3 392 aa15.97■□□□□ 0.15
CDKL1-202ENST00000356146 USP27XA6NNY8 438 aa15.97■□□□□ 0.15
CDKL1-202ENST00000356146 CCDC150Q8NCX0 1101 aa15.97■□□□□ 0.15
CDKL1-202ENST00000356146 KIF18AQ8NI77 898 aa15.97■□□□□ 0.15
CDKL1-202ENST00000356146 FTOQ9C0B1 505 aaKnown RBP eCLIP15.97■□□□□ 0.15
CDKL1-202ENST00000356146 HSPD1P10809 573 aaKnown RBP15.96■□□□□ 0.15
CDKL1-202ENST00000356146 ATG9AQ7Z3C6 839 aa15.96■□□□□ 0.15
CDKL1-202ENST00000356146 KCNG4Q8TDN1 519 aa15.96■□□□□ 0.15
CDKL1-202ENST00000356146 RAPGEF4Q8WZA2 1011 aa15.96■□□□□ 0.15
CDKL1-202ENST00000356146 POLR3EQ9NVU0 708 aa15.96■□□□□ 0.15
CDKL1-202ENST00000356146 PCDHA7Q9UN72 937 aa15.96■□□□□ 0.15
CDKL1-202ENST00000356146 USP16Q9Y5T5 823 aa15.96■□□□□ 0.15
CDKL1-202ENST00000356146 TJP1Q07157 1748 aa15.96■□□□□ 0.15
CDKL1-202ENST00000356146 H7C1W4 665 aa15.96■□□□□ 0.15
CDKL1-202ENST00000356146 CHGBP05060 677 aa15.96■□□□□ 0.15
CDKL1-202ENST00000356146 ME1P48163 572 aa15.96■□□□□ 0.15
CDKL1-202ENST00000356146 CEBPZQ03701 1054 aaKnown RBP15.96■□□□□ 0.15
CDKL1-202ENST00000356146 ARID5BQ14865 1188 aa15.96■□□□□ 0.15
CDKL1-202ENST00000356146 NBPF11Q86T75 865 aa15.96■□□□□ 0.15
CDKL1-202ENST00000356146 NDUFB9Q9Y6M9 179 aa15.96■□□□□ 0.15
CDKL1-202ENST00000356146 NEDD4P46934 1319 aa15.96■□□□□ 0.15
CDKL1-202ENST00000356146 NUP188Q5SRE5 1749 aa15.96■□□□□ 0.15
CDKL1-202ENST00000356146 A0A087WZG4 1122 aa15.96■□□□□ 0.14
CDKL1-202ENST00000356146 FOXO4P98177 505 aa15.96■□□□□ 0.14
CDKL1-202ENST00000356146 LINC00301Q8NCQ3 95 aa15.96■□□□□ 0.14
CDKL1-202ENST00000356146 FMNL2Q96PY5 1086 aa15.96■□□□□ 0.14
CDKL1-202ENST00000356146 PSDA5PKW4 1024 aaPredicted RBP15.95■□□□□ 0.14
CDKL1-202ENST00000356146 FDPSP14324 419 aaKnown RBP15.95■□□□□ 0.14
CDKL1-202ENST00000356146 IL15P40933 162 aaPredicted RBP15.95■□□□□ 0.14
CDKL1-202ENST00000356146 AOPEPQ8N6M6 819 aa15.95■□□□□ 0.14
CDKL1-202ENST00000356146 NFATC2IPQ8NCF5 419 aa15.95■□□□□ 0.14
CDKL1-202ENST00000356146 L2HGDHQ9H9P8 463 aa15.95■□□□□ 0.14
CDKL1-202ENST00000356146 ATG3Q9NT62 314 aa15.95■□□□□ 0.14
CDKL1-202ENST00000356146 KIAA1468Q9P260 1216 aa15.95■□□□□ 0.14
CDKL1-202ENST00000356146 ZHX1Q9UKY1 873 aaPredicted RBP15.95■□□□□ 0.14
CDKL1-202ENST00000356146 MEGF6O75095 1541 aa15.95■□□□□ 0.14
CDKL1-202ENST00000356146 MAST3O60307 1309 aa15.95■□□□□ 0.14
CDKL1-202ENST00000356146 BRAPQ7Z569 592 aa15.95■□□□□ 0.14
CDKL1-202ENST00000356146 IFNL2Q8IZJ0 200 aa15.95■□□□□ 0.14
CDKL1-202ENST00000356146 COL18A1P39060 1754 aa15.95■□□□□ 0.14
CDKL1-202ENST00000356146 WDR19Q8NEZ3 1342 aa15.94■□□□□ 0.14
CDKL1-202ENST00000356146 RNF113AO15541 343 aaKnown RBP15.94■□□□□ 0.14
CDKL1-202ENST00000356146 TATP17735 454 aaPredicted RBP15.94■□□□□ 0.14
CDKL1-202ENST00000356146 FAM193AP78312 1265 aa15.94■□□□□ 0.14
CDKL1-202ENST00000356146 DCAF5Q96JK2 942 aa15.94■□□□□ 0.14
CDKL1-202ENST00000356146 ZNF215Q9UL58 517 aaPredicted RBP15.94■□□□□ 0.14
CDKL1-202ENST00000356146 GOLIM4O00461 696 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms