RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 NUDT16Q96DE0 195 aaKnown RBP19.49■□□□□ 0.71
COL27A1-201ENST00000356083 CALCOCO1Q9P1Z2 691 aa19.49■□□□□ 0.71
COL27A1-201ENST00000356083 GOLGA6L9A6NEM1 432 aa19.49■□□□□ 0.71
COL27A1-201ENST00000356083 CASC4Q6P4E1 433 aa19.49■□□□□ 0.71
COL27A1-201ENST00000356083 FNBP4Q8N3X1 1017 aaPredicted RBP19.49■□□□□ 0.71
COL27A1-201ENST00000356083 MSANTD4Q8NCY6 345 aa19.49■□□□□ 0.71
COL27A1-201ENST00000356083 WHAMMQ8TF30 809 aa19.49■□□□□ 0.71
COL27A1-201ENST00000356083 ZYXQ15942 572 aaKnown RBP19.49■□□□□ 0.71
COL27A1-201ENST00000356083 CEP120Q8N960 986 aa19.49■□□□□ 0.71
COL27A1-201ENST00000356083 ZC3H12CQ9C0D7 883 aaKnown RBP19.49■□□□□ 0.71
COL27A1-201ENST00000356083 ADCY5O95622 1261 aa19.49■□□□□ 0.71
COL27A1-201ENST00000356083 TMTC4Q5T4D3 741 aa19.49■□□□□ 0.71
COL27A1-201ENST00000356083 RAPGEF1Q13905 1077 aa19.48■□□□□ 0.71
COL27A1-201ENST00000356083 CHRNA2Q15822 529 aa19.48■□□□□ 0.71
COL27A1-201ENST00000356083 NCOA7Q8NI08 942 aa19.48■□□□□ 0.71
COL27A1-201ENST00000356083 BIRC3Q13489 604 aa19.48■□□□□ 0.71
COL27A1-201ENST00000356083 TTC30BQ8N4P2 665 aa19.48■□□□□ 0.71
COL27A1-201ENST00000356083 SF3A3Q12874 501 aaKnown RBP eCLIP19.48■□□□□ 0.712e-7■■■■□ 25.4
COL27A1-201ENST00000356083 SDCCAG8Q86SQ7 713 aaPredicted RBP19.48■□□□□ 0.71
COL27A1-201ENST00000356083 CYLC1P35663 651 aaPredicted RBP19.48■□□□□ 0.71
COL27A1-201ENST00000356083 RSPH14Q9UHP6 348 aa19.48■□□□□ 0.71
COL27A1-201ENST00000356083 NOP56O00567 594 aaKnown RBP19.47■□□□□ 0.71
COL27A1-201ENST00000356083 FBLN1P23142 703 aa19.47■□□□□ 0.71
COL27A1-201ENST00000356083 UBLCP1Q8WVY7 318 aaPredicted RBP19.47■□□□□ 0.71
COL27A1-201ENST00000356083 PICK1Q9NRD5 415 aa19.47■□□□□ 0.71
COL27A1-201ENST00000356083 IRAK4Q9NWZ3 460 aa19.47■□□□□ 0.71
COL27A1-201ENST00000356083 MCM7P33993 719 aa19.47■□□□□ 0.71
COL27A1-201ENST00000356083 FNBP1Q96RU3 617 aa19.47■□□□□ 0.71
COL27A1-201ENST00000356083 ZHX1Q9UKY1 873 aaPredicted RBP19.47■□□□□ 0.71
COL27A1-201ENST00000356083 SEPT10Q9P0V9 454 aa19.47■□□□□ 0.71
COL27A1-201ENST00000356083 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.47■□□□□ 0.714e-7■■□□□ 12.8
COL27A1-201ENST00000356083 CCDC169A6NNP5 214 aa19.47■□□□□ 0.71
COL27A1-201ENST00000356083 TMPOP42166 694 aaKnown RBP19.47■□□□□ 0.71
COL27A1-201ENST00000356083 CPLX4Q7Z7G2 160 aa19.47■□□□□ 0.71
COL27A1-201ENST00000356083 CCDC110Q8TBZ0 833 aa19.47■□□□□ 0.71
COL27A1-201ENST00000356083 WDR46O15213 610 aaKnown RBP19.47■□□□□ 0.71
COL27A1-201ENST00000356083 XRCC6P12956 609 aaKnown RBP eCLIP19.47■□□□□ 0.71
COL27A1-201ENST00000356083 RMND1Q9NWS8 449 aa19.47■□□□□ 0.71
COL27A1-201ENST00000356083 TSTA3Q13630 321 aaPredicted RBP19.46■□□□□ 0.71
COL27A1-201ENST00000356083 RTN1Q16799 776 aa19.46■□□□□ 0.71
COL27A1-201ENST00000356083 SH2B1Q9NRF2 756 aaPredicted RBP19.46■□□□□ 0.71
COL27A1-201ENST00000356083 LIMCH1Q9UPQ0 1083 aa19.46■□□□□ 0.71
COL27A1-201ENST00000356083 NAIPQ13075 1403 aa19.46■□□□□ 0.71
COL27A1-201ENST00000356083 RNASE9P60153 205 aaKnown RBP19.46■□□□□ 0.71
COL27A1-201ENST00000356083 NFE2L2Q16236 605 aa19.46■□□□□ 0.71
COL27A1-201ENST00000356083 ITIH3Q06033 890 aa19.46■□□□□ 0.71
COL27A1-201ENST00000356083 CHST3Q7LGC8 479 aa19.46■□□□□ 0.71
COL27A1-201ENST00000356083 STX10O60499 249 aa19.46■□□□□ 0.71
COL27A1-201ENST00000356083 ALG1Q9BT22 464 aa19.46■□□□□ 0.71
COL27A1-201ENST00000356083 NUF2Q9BZD4 464 aa19.46■□□□□ 0.71
COL27A1-201ENST00000356083 RBM27Q9P2N5 1060 aaKnown RBP19.46■□□□□ 0.71
COL27A1-201ENST00000356083 GSDMDP57764 484 aa19.45■□□□□ 0.7
COL27A1-201ENST00000356083 STIM2Q9P246 746 aa19.45■□□□□ 0.7
COL27A1-201ENST00000356083 CHMP2AO43633 222 aa19.45■□□□□ 0.7
COL27A1-201ENST00000356083 FAM204AQ9H8W3 233 aa19.45■□□□□ 0.7
COL27A1-201ENST00000356083 FANCD2Q9BXW9 1451 aa19.45■□□□□ 0.7
COL27A1-201ENST00000356083 MAN1A1P33908 653 aa19.45■□□□□ 0.7
COL27A1-201ENST00000356083 EAPPQ56P03 285 aaPredicted RBP19.45■□□□□ 0.7
COL27A1-201ENST00000356083 NAA16Q6N069 864 aaPredicted RBP19.45■□□□□ 0.7
COL27A1-201ENST00000356083 POTEB2H3BUK9 544 aa19.45■□□□□ 0.7
COL27A1-201ENST00000356083 DMRT2Q9Y5R5 561 aa19.45■□□□□ 0.7
COL27A1-201ENST00000356083 UBAP1LF5GYI3 381 aa19.45■□□□□ 0.7
COL27A1-201ENST00000356083 ZBTB43O43298 467 aa19.45■□□□□ 0.7
COL27A1-201ENST00000356083 PRPHP41219 470 aa19.45■□□□□ 0.7
COL27A1-201ENST00000356083 TNNI2P48788 182 aa19.45■□□□□ 0.7
COL27A1-201ENST00000356083 MCM5P33992 734 aa19.44■□□□□ 0.7
COL27A1-201ENST00000356083 ZNF165P49910 485 aa19.44■□□□□ 0.7
COL27A1-201ENST00000356083 CTAGE9A4FU28 777 aa19.44■□□□□ 0.7
COL27A1-201ENST00000356083 STK25O00506 426 aa19.44■□□□□ 0.7
COL27A1-201ENST00000356083 GIMAP6Q6P9H5 292 aa19.44■□□□□ 0.7
COL27A1-201ENST00000356083 MIPOL1Q8TD10 442 aa19.44■□□□□ 0.7
COL27A1-201ENST00000356083 LEO1Q8WVC0 666 aaPredicted RBP19.44■□□□□ 0.7
COL27A1-201ENST00000356083 BRD4O60885 1362 aaPredicted RBP19.44■□□□□ 0.7
COL27A1-201ENST00000356083 FAM200AQ8TCP9 573 aa19.44■□□□□ 0.7
COL27A1-201ENST00000356083 NEK1Q96PY6 1258 aa19.44■□□□□ 0.7
COL27A1-201ENST00000356083 SAP30BPQ9UHR5 308 aaKnown RBP19.44■□□□□ 0.7
COL27A1-201ENST00000356083 NSFL1CQ9UNZ2 370 aaKnown RBP19.44■□□□□ 0.7
COL27A1-201ENST00000356083 PDIA4P13667 645 aaKnown RBP19.44■□□□□ 0.7
COL27A1-201ENST00000356083 SKA2Q8WVK7 121 aaPredicted RBP19.44■□□□□ 0.7
COL27A1-201ENST00000356083 DHX58Q96C10 678 aa19.44■□□□□ 0.7
COL27A1-201ENST00000356083 PARP3Q9Y6F1 533 aa19.44■□□□□ 0.7
COL27A1-201ENST00000356083 SH2D4BQ5SQS7 431 aa19.44■□□□□ 0.7
COL27A1-201ENST00000356083 CCDC129Q6ZRS4 1044 aa19.44■□□□□ 0.7
COL27A1-201ENST00000356083 NECAB1Q8N987 351 aa19.44■□□□□ 0.7
COL27A1-201ENST00000356083 ZNF830Q96NB3 372 aaPredicted RBP19.44■□□□□ 0.7
COL27A1-201ENST00000356083 PYM1Q9BRP8 204 aaKnown RBP19.44■□□□□ 0.7
COL27A1-201ENST00000356083 HS2ST1Q7LGA3 356 aa19.44■□□□□ 0.7
COL27A1-201ENST00000356083 CHMP6Q96FZ7 201 aa19.44■□□□□ 0.7
COL27A1-201ENST00000356083 ZGPATQ8N5A5 531 aaKnown RBP19.43■□□□□ 0.7
COL27A1-201ENST00000356083 NEK11Q8NG66 645 aa19.43■□□□□ 0.7
COL27A1-201ENST00000356083 FRMD4BQ9Y2L6 1034 aa19.43■□□□□ 0.7
COL27A1-201ENST00000356083 DDX39AO00148 427 aaKnown RBP19.43■□□□□ 0.7
COL27A1-201ENST00000356083 CEP85LQ5SZL2 805 aa19.43■□□□□ 0.7
COL27A1-201ENST00000356083 KLF18A0A0U1RQI7 1052 aa19.43■□□□□ 0.7
COL27A1-201ENST00000356083 CCT6AP40227 531 aaKnown RBP19.43■□□□□ 0.7
COL27A1-201ENST00000356083 NLRP3Q96P20 1036 aa19.43■□□□□ 0.7
COL27A1-201ENST00000356083 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.43■□□□□ 0.71e-7■■□□□ 13.1
COL27A1-201ENST00000356083 EHBP1Q8NDI1 1231 aa19.43■□□□□ 0.7
COL27A1-201ENST00000356083 IFRD2Q12894 506 aaPredicted RBP19.43■□□□□ 0.7
COL27A1-201ENST00000356083 MICALL1Q8N3F8 863 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms