RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 RNF181Q9P0P0 153 aa19.16■□□□□ 0.66
TRIM13-201ENST00000356017 UTRNP46939 3433 aa19.16■□□□□ 0.66
TRIM13-201ENST00000356017 CAVIN4Q5BKX8 364 aa19.15■□□□□ 0.66
TRIM13-201ENST00000356017 C9orf131Q5VYM1 1079 aa19.15■□□□□ 0.66
TRIM13-201ENST00000356017 NIM1KQ8IY84 436 aa19.15■□□□□ 0.66
TRIM13-201ENST00000356017 CLASRPQ8N2M8 674 aaKnown RBP19.15■□□□□ 0.66
TRIM13-201ENST00000356017 GPR101Q96P66 508 aaPredicted RBP19.15■□□□□ 0.66
TRIM13-201ENST00000356017 APBB1O00213 710 aa19.14■□□□□ 0.66
TRIM13-201ENST00000356017 PRELPP51888 382 aa19.14■□□□□ 0.66
TRIM13-201ENST00000356017 TNNI3KQ59H18 835 aa19.14■□□□□ 0.66
TRIM13-201ENST00000356017 ZNF804AQ7Z570 1209 aa19.14■□□□□ 0.66
TRIM13-201ENST00000356017 COA1Q9GZY4 146 aa19.14■□□□□ 0.66
TRIM13-201ENST00000356017 FPGT-TNNI3KV9GXZ4 949 aa19.14■□□□□ 0.66
TRIM13-201ENST00000356017 A0A1B0GUL7 405 aa19.14■□□□□ 0.65
TRIM13-201ENST00000356017 IGHDP01880 384 aa19.14■□□□□ 0.65
TRIM13-201ENST00000356017 TIMM10P62072 90 aa19.14■□□□□ 0.65
TRIM13-201ENST00000356017 VPS37DQ86XT2 251 aa19.14■□□□□ 0.65
TRIM13-201ENST00000356017 NEUROD6Q96NK8 337 aa19.14■□□□□ 0.65
TRIM13-201ENST00000356017 ZC3H4Q9UPT8 1303 aaKnown RBP19.13■□□□□ 0.65
TRIM13-201ENST00000356017 IRS2Q9Y4H2 1338 aa19.13■□□□□ 0.65
TRIM13-201ENST00000356017 PODNQ7Z5L7 613 aa19.13■□□□□ 0.65
TRIM13-201ENST00000356017 TXNRD3Q86VQ6 643 aa19.13■□□□□ 0.65
TRIM13-201ENST00000356017 ZBTB47Q9UFB7 747 aaPredicted RBP19.13■□□□□ 0.65
TRIM13-201ENST00000356017 ZNRF3Q9ULT6 936 aa19.13■□□□□ 0.65
TRIM13-201ENST00000356017 KLRK1P26718 216 aa19.12■□□□□ 0.65
TRIM13-201ENST00000356017 HIBADHP31937 336 aaKnown RBP19.12■□□□□ 0.65
TRIM13-201ENST00000356017 SMC5Q8IY18 1101 aa19.12■□□□□ 0.65
TRIM13-201ENST00000356017 FAM84BQ96KN1 310 aaPredicted RBP19.12■□□□□ 0.65
TRIM13-201ENST00000356017 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.12■□□□□ 0.65
TRIM13-201ENST00000356017 A0A1B0GUL6 1792 aa19.12■□□□□ 0.65
TRIM13-201ENST00000356017 DOK7Q18PE1 504 aa19.11■□□□□ 0.65
TRIM13-201ENST00000356017 IL1RAPL2Q9NP60 686 aa19.11■□□□□ 0.65
TRIM13-201ENST00000356017 ZNF609O15014 1411 aa19.11■□□□□ 0.65
TRIM13-201ENST00000356017 FZD9O00144 591 aa19.11■□□□□ 0.65
TRIM13-201ENST00000356017 ECE2O60344 883 aa19.11■□□□□ 0.65
TRIM13-201ENST00000356017 GYG1P46976 350 aa19.11■□□□□ 0.65
TRIM13-201ENST00000356017 GORABQ5T7V8 394 aa19.11■□□□□ 0.65
TRIM13-201ENST00000356017 FBXO33Q7Z6M2 555 aa19.11■□□□□ 0.65
TRIM13-201ENST00000356017 EAF2Q96CJ1 260 aaPredicted RBP19.11■□□□□ 0.65
TRIM13-201ENST00000356017 XAGE2Q96GT9 111 aa19.11■□□□□ 0.65
TRIM13-201ENST00000356017 DBNDD1Q9H9R9 158 aa19.11■□□□□ 0.65
TRIM13-201ENST00000356017 CD209Q9NNX6 404 aa19.11■□□□□ 0.65
TRIM13-201ENST00000356017 GNL3LQ9NVN8 582 aaKnown RBP19.11■□□□□ 0.65
TRIM13-201ENST00000356017 IFIT2P09913 472 aaKnown RBP19.1■□□□□ 0.65
TRIM13-201ENST00000356017 AACSQ86V21 672 aa19.1■□□□□ 0.65
TRIM13-201ENST00000356017 SBF1O95248 1867 aa19.09■□□□□ 0.65
TRIM13-201ENST00000356017 IL1R1P14778 569 aa19.09■□□□□ 0.65
TRIM13-201ENST00000356017 BCAMP50895 628 aa19.09■□□□□ 0.65
TRIM13-201ENST00000356017 EIF6P56537 245 aaKnown RBP19.09■□□□□ 0.65
TRIM13-201ENST00000356017 ANKRD45Q5TZF3 282 aa19.09■□□□□ 0.65
TRIM13-201ENST00000356017 CCDC158Q5M9N0 1113 aa19.08■□□□□ 0.65
TRIM13-201ENST00000356017 CCDC102BQ68D86 513 aa19.08■□□□□ 0.65
TRIM13-201ENST00000356017 CCDC136Q96JN2 1154 aa19.08■□□□□ 0.65
TRIM13-201ENST00000356017 ADORA1P30542 326 aa19.07■□□□□ 0.64
TRIM13-201ENST00000356017 DPY19L2Q6NUT2 758 aa19.07■□□□□ 0.64
TRIM13-201ENST00000356017 CCDC8Q9H0W5 538 aaPredicted RBP19.07■□□□□ 0.64
TRIM13-201ENST00000356017 ZBTB22O15209 634 aa19.07■□□□□ 0.64
TRIM13-201ENST00000356017 SMARCA5O60264 1052 aaPredicted RBP19.07■□□□□ 0.64
TRIM13-201ENST00000356017 FRAT2O75474 233 aaPredicted RBP19.07■□□□□ 0.64
TRIM13-201ENST00000356017 TNIP1Q15025 636 aa19.07■□□□□ 0.64
TRIM13-201ENST00000356017 TDRD7Q8NHU6 1098 aaKnown RBP19.07■□□□□ 0.64
TRIM13-201ENST00000356017 DBNDD2Q9BQY9 259 aa19.07■□□□□ 0.64
TRIM13-201ENST00000356017 PPP4R2Q9NY27 417 aa19.07■□□□□ 0.64
TRIM13-201ENST00000356017 DBNLQ9UJU6 430 aaKnown RBP19.07■□□□□ 0.64
TRIM13-201ENST00000356017 COL4A5P29400 1685 aa19.06■□□□□ 0.64
TRIM13-201ENST00000356017 YDJCA8MPS7 323 aa19.06■□□□□ 0.64
TRIM13-201ENST00000356017 SEMA3EO15041 775 aa19.06■□□□□ 0.64
TRIM13-201ENST00000356017 BCL11AQ9H165 835 aa19.06■□□□□ 0.64
TRIM13-201ENST00000356017 DICER1Q9UPY3 1922 aaKnown RBP19.05■□□□□ 0.64
TRIM13-201ENST00000356017 USP17L3A6NCW0 530 aa19.05■□□□□ 0.64
TRIM13-201ENST00000356017 USP17L4A6NCW7 530 aa19.05■□□□□ 0.64
TRIM13-201ENST00000356017 UQCRFS1P1P0C7P4 283 aa19.05■□□□□ 0.64
TRIM13-201ENST00000356017 PHKA1P46020 1223 aa19.05■□□□□ 0.64
TRIM13-201ENST00000356017 CXCL9Q07325 125 aa19.05■□□□□ 0.64
TRIM13-201ENST00000356017 STRIP1Q5VSL9 837 aa19.05■□□□□ 0.64
TRIM13-201ENST00000356017 CIAPIN1Q6FI81 312 aa19.05■□□□□ 0.64
TRIM13-201ENST00000356017 USP17L1Q7RTZ2 530 aa19.05■□□□□ 0.64
TRIM13-201ENST00000356017 NUCB1Q02818 461 aa19.04■□□□□ 0.64
TRIM13-201ENST00000356017 TTLL5Q6EMB2 1281 aa19.04■□□□□ 0.64
TRIM13-201ENST00000356017 B4GALNT3Q6L9W6 998 aa19.04■□□□□ 0.64
TRIM13-201ENST00000356017 CENPQQ7L2Z9 268 aaPredicted RBP19.04■□□□□ 0.64
TRIM13-201ENST00000356017 ZNF512BQ96KM6 892 aaPredicted RBP19.04■□□□□ 0.64
TRIM13-201ENST00000356017 CCDC88AQ3V6T2 1871 aa19.04■□□□□ 0.64
TRIM13-201ENST00000356017 RAD17O75943 681 aa19.03■□□□□ 0.64
TRIM13-201ENST00000356017 TTC39AQ5SRH9 613 aa19.03■□□□□ 0.64
TRIM13-201ENST00000356017 CHD1LQ86WJ1 897 aa19.03■□□□□ 0.64
TRIM13-201ENST00000356017 GPC2Q8N158 579 aa19.03■□□□□ 0.64
TRIM13-201ENST00000356017 TLR7Q9NYK1 1049 aaKnown RBP19.03■□□□□ 0.64
TRIM13-201ENST00000356017 DENND2AQ9ULE3 1009 aa19.03■□□□□ 0.64
TRIM13-201ENST00000356017 ARAP2Q8WZ64 1704 aa19.03■□□□□ 0.64
TRIM13-201ENST00000356017 GLTPD2A6NH11 291 aa19.03■□□□□ 0.64
TRIM13-201ENST00000356017 ARID4AP29374 1257 aaPredicted RBP19.03■□□□□ 0.64
TRIM13-201ENST00000356017 GTF2IP78347 998 aa19.03■□□□□ 0.64
TRIM13-201ENST00000356017 GPATCH3Q96I76 525 aa19.03■□□□□ 0.64
TRIM13-201ENST00000356017 KCNQ5Q9NR82 932 aa19.03■□□□□ 0.64
TRIM13-201ENST00000356017 IQSEC3Q9UPP2 1182 aaPredicted RBP19.03■□□□□ 0.64
TRIM13-201ENST00000356017 CHD4Q14839 1912 aa19.02■□□□□ 0.64
TRIM13-201ENST00000356017 VIL1P09327 827 aaKnown RBP19.02■□□□□ 0.64
TRIM13-201ENST00000356017 FAM205AQ6ZU69 1335 aa19.02■□□□□ 0.64
TRIM13-201ENST00000356017 KDM2BQ8NHM5 1336 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms