RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 NMIQ13287 307 aaPredicted RBP16.48■□□□□ 0.23
HOXA1-202ENST00000355633 ANTXR1Q9H6X2 564 aa16.48■□□□□ 0.23
HOXA1-202ENST00000355633 TICAM2Q86XR7 235 aa16.47■□□□□ 0.23
HOXA1-202ENST00000355633 FAM227BQ96M60 508 aa16.47■□□□□ 0.23
HOXA1-202ENST00000355633 IPO9Q96P70 1041 aaKnown RBP16.47■□□□□ 0.23
HOXA1-202ENST00000355633 PDGFDQ9GZP0 370 aaPredicted RBP16.47■□□□□ 0.23
HOXA1-202ENST00000355633 RAD50Q92878 1312 aa16.47■□□□□ 0.23
HOXA1-202ENST00000355633 BBOX1O75936 387 aa16.46■□□□□ 0.23
HOXA1-202ENST00000355633 BCAMP50895 628 aa16.46■□□□□ 0.23
HOXA1-202ENST00000355633 PI16Q6UXB8 463 aa16.46■□□□□ 0.23
HOXA1-202ENST00000355633 A0A0D9SFI3 127 aa16.46■□□□□ 0.23
HOXA1-202ENST00000355633 EPB41L2O43491 1005 aaKnown RBP16.46■□□□□ 0.23
HOXA1-202ENST00000355633 SRGNP10124 158 aa16.46■□□□□ 0.23
HOXA1-202ENST00000355633 CAVIN4Q5BKX8 364 aa16.46■□□□□ 0.23
HOXA1-202ENST00000355633 KIAA1211Q6ZU35 1233 aa16.46■□□□□ 0.23
HOXA1-202ENST00000355633 SLC16A10Q8TF71 515 aa16.46■□□□□ 0.23
HOXA1-202ENST00000355633 WTIPA6NIX2 430 aaPredicted RBP16.45■□□□□ 0.22
HOXA1-202ENST00000355633 NPR1P16066 1061 aa16.45■□□□□ 0.22
HOXA1-202ENST00000355633 ANKIB1Q9P2G1 1089 aa16.45■□□□□ 0.22
HOXA1-202ENST00000355633 COL11A2P13942 1736 aaPredicted RBP16.45■□□□□ 0.22
HOXA1-202ENST00000355633 ZNF804BA4D1E1 1349 aa16.45■□□□□ 0.22
HOXA1-202ENST00000355633 GYG1P46976 350 aa16.45■□□□□ 0.22
HOXA1-202ENST00000355633 RASGRF1Q13972 1273 aa16.45■□□□□ 0.22
HOXA1-202ENST00000355633 TTF1Q15361 905 aaPredicted RBP16.45■□□□□ 0.22
HOXA1-202ENST00000355633 LRRFIP1Q32MZ4 808 aaKnown RBP16.45■□□□□ 0.22
HOXA1-202ENST00000355633 TMC4Q7Z404 712 aa16.45■□□□□ 0.22
HOXA1-202ENST00000355633 HMG20BQ9P0W2 317 aa16.45■□□□□ 0.22
HOXA1-202ENST00000355633 XDHP47989 1333 aa16.44■□□□□ 0.22
HOXA1-202ENST00000355633 SPATA5Q8NB90 893 aa16.44■□□□□ 0.22
HOXA1-202ENST00000355633 LEMD3Q9Y2U8 911 aa16.44■□□□□ 0.22
HOXA1-202ENST00000355633 CYP2E1P05181 493 aaPredicted RBP16.43■□□□□ 0.22
HOXA1-202ENST00000355633 MCCP23508 829 aa16.43■□□□□ 0.22
HOXA1-202ENST00000355633 VPS37DQ86XT2 251 aa16.43■□□□□ 0.22
HOXA1-202ENST00000355633 MASTLQ96GX5 879 aa16.43■□□□□ 0.22
HOXA1-202ENST00000355633 LSG1Q9H089 658 aaKnown RBP16.43■□□□□ 0.22
HOXA1-202ENST00000355633 GNL3LQ9NVN8 582 aaKnown RBP16.43■□□□□ 0.22
HOXA1-202ENST00000355633 MED23Q9ULK4 1368 aa16.43■□□□□ 0.22
HOXA1-202ENST00000355633 PPEF1O14829 653 aaPredicted RBP16.43■□□□□ 0.22
HOXA1-202ENST00000355633 ALDH1B1P30837 517 aa16.43■□□□□ 0.22
HOXA1-202ENST00000355633 SLC51AQ86UW1 340 aa16.43■□□□□ 0.22
HOXA1-202ENST00000355633 FAM84BQ96KN1 310 aaPredicted RBP16.43■□□□□ 0.22
HOXA1-202ENST00000355633 KIF2CQ99661 725 aa16.43■□□□□ 0.22
HOXA1-202ENST00000355633 MYH7P12883 1935 aa16.43■□□□□ 0.22
HOXA1-202ENST00000355633 LRRC37AA6NMS7 1700 aa16.42■□□□□ 0.22
HOXA1-202ENST00000355633 RNF113AO15541 343 aaKnown RBP16.42■□□□□ 0.22
HOXA1-202ENST00000355633 CHGBP05060 677 aa16.42■□□□□ 0.22
HOXA1-202ENST00000355633 KLRK1P26718 216 aa16.42■□□□□ 0.22
HOXA1-202ENST00000355633 UPF1Q92900 1129 aaKnown RBP eCLIP16.42■□□□□ 0.22
HOXA1-202ENST00000355633 NSFL1CQ9UNZ2 370 aaKnown RBP16.42■□□□□ 0.22
HOXA1-202ENST00000355633 ZFYP08048 801 aaPredicted RBP16.41■□□□□ 0.22
HOXA1-202ENST00000355633 GPSM2P81274 684 aa16.41■□□□□ 0.22
HOXA1-202ENST00000355633 MCMDC2Q4G0Z9 681 aa16.41■□□□□ 0.22
HOXA1-202ENST00000355633 FBXO33Q7Z6M2 555 aa16.41■□□□□ 0.22
HOXA1-202ENST00000355633 C2CD5Q86YS7 1000 aa16.41■□□□□ 0.22
HOXA1-202ENST00000355633 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.41■□□□□ 0.22
HOXA1-202ENST00000355633 HELLSQ9NRZ9 838 aa16.41■□□□□ 0.22
HOXA1-202ENST00000355633 H0YIN7 160 aa16.41■□□□□ 0.22
HOXA1-202ENST00000355633 ATP2B4P23634 1241 aa16.41■□□□□ 0.22
HOXA1-202ENST00000355633 ZMYM1Q5SVZ6 1142 aa16.41■□□□□ 0.22
HOXA1-202ENST00000355633 ZNF589Q86UQ0 364 aaPredicted RBP16.41■□□□□ 0.22
HOXA1-202ENST00000355633 SP8Q8IXZ3 490 aa16.41■□□□□ 0.22
HOXA1-202ENST00000355633 PIH1D3Q9NQM4 214 aaKnown RBP16.41■□□□□ 0.22
HOXA1-202ENST00000355633 IQSEC3Q9UPP2 1182 aaPredicted RBP16.41■□□□□ 0.22
HOXA1-202ENST00000355633 CCDC171Q6TFL3 1326 aa16.41■□□□□ 0.22
HOXA1-202ENST00000355633 MYO5AQ9Y4I1 1855 aaKnown RBP16.4■□□□□ 0.22
HOXA1-202ENST00000355633 PRKCSHP14314 528 aaPredicted RBP16.4■□□□□ 0.22
HOXA1-202ENST00000355633 HIBADHP31937 336 aaKnown RBP16.4■□□□□ 0.22
HOXA1-202ENST00000355633 ZSCAN25Q6NSZ9 544 aa16.4■□□□□ 0.22
HOXA1-202ENST00000355633 ZNF622Q969S3 477 aaKnown RBP eCLIP16.4■□□□□ 0.22
HOXA1-202ENST00000355633 SEC62Q99442 399 aaKnown RBP16.4■□□□□ 0.22
HOXA1-202ENST00000355633 DOCK2Q92608 1830 aa16.4■□□□□ 0.22
HOXA1-202ENST00000355633 IDH1O75874 414 aaKnown RBP16.4■□□□□ 0.22
HOXA1-202ENST00000355633 PTH1RQ03431 593 aa16.4■□□□□ 0.22
HOXA1-202ENST00000355633 SLFNL1Q499Z3 407 aa16.4■□□□□ 0.22
HOXA1-202ENST00000355633 ERICH6Q7L0X2 663 aa16.4■□□□□ 0.22
HOXA1-202ENST00000355633 PODXL2Q9NZ53 605 aa16.4■□□□□ 0.22
HOXA1-202ENST00000355633 GGA1Q9UJY5 639 aa16.4■□□□□ 0.22
HOXA1-202ENST00000355633 ATP6V0A2Q9Y487 856 aa16.4■□□□□ 0.22
HOXA1-202ENST00000355633 IRS2Q9Y4H2 1338 aa16.39■□□□□ 0.22
HOXA1-202ENST00000355633 CACNA1SQ13698 1873 aa16.39■□□□□ 0.21
HOXA1-202ENST00000355633 MYH13Q9UKX3 1938 aa16.39■□□□□ 0.21
HOXA1-202ENST00000355633 SEMA3EO15041 775 aa16.39■□□□□ 0.21
HOXA1-202ENST00000355633 UFL1O94874 794 aa16.39■□□□□ 0.21
HOXA1-202ENST00000355633 HSPA4P34932 840 aa16.39■□□□□ 0.21
HOXA1-202ENST00000355633 STYK1Q6J9G0 422 aa16.39■□□□□ 0.21
HOXA1-202ENST00000355633 DENND2AQ9ULE3 1009 aa16.39■□□□□ 0.21
HOXA1-202ENST00000355633 ANAPC15P60006 121 aa16.38■□□□□ 0.21
HOXA1-202ENST00000355633 BECN1Q14457 450 aa16.38■□□□□ 0.21
HOXA1-202ENST00000355633 WASHC4Q2M389 1173 aa16.38■□□□□ 0.21
HOXA1-202ENST00000355633 C15orf52Q6ZUT6 534 aaKnown RBP16.38■□□□□ 0.21
HOXA1-202ENST00000355633 TXNRD3Q86VQ6 643 aa16.38■□□□□ 0.21
HOXA1-202ENST00000355633 APPBP2Q92624 585 aa16.38■□□□□ 0.21
HOXA1-202ENST00000355633 C10orf71Q711Q0 1435 aa16.38■□□□□ 0.21
HOXA1-202ENST00000355633 FRAT2O75474 233 aaPredicted RBP16.38■□□□□ 0.21
HOXA1-202ENST00000355633 COL1A1P02452 1464 aaPredicted RBP16.38■□□□□ 0.21
HOXA1-202ENST00000355633 ADD2P35612 726 aa16.38■□□□□ 0.21
HOXA1-202ENST00000355633 LTBP1Q14766 1721 aa16.38■□□□□ 0.21
HOXA1-202ENST00000355633 RABEP1Q15276 862 aa16.38■□□□□ 0.21
HOXA1-202ENST00000355633 SLC9C2Q5TAH2 1124 aa16.38■□□□□ 0.21
HOXA1-202ENST00000355633 CCDC129Q6ZRS4 1044 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms