RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 CUL5Q93034 780 aa14.21□□□□□ -0.13
COLCA1-201ENST00000355430 CCDC82Q8N4S0 544 aa14.21□□□□□ -0.14
COLCA1-201ENST00000355430 PIBF1Q8WXW3 757 aa14.21□□□□□ -0.14
COLCA1-201ENST00000355430 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.21□□□□□ -0.14
COLCA1-201ENST00000355430 V9GYY5 206 aaPredicted RBP14.21□□□□□ -0.14
COLCA1-201ENST00000355430 CCDC150Q8NCX0 1101 aa14.2□□□□□ -0.14
COLCA1-201ENST00000355430 BEGAINQ9BUH8 593 aa14.2□□□□□ -0.14
COLCA1-201ENST00000355430 POLR3GO15318 223 aaPredicted RBP14.2□□□□□ -0.14
COLCA1-201ENST00000355430 CRNKL1Q9BZJ0 848 aaKnown RBP14.2□□□□□ -0.14
COLCA1-201ENST00000355430 KAT6BQ8WYB5 2073 aa14.2□□□□□ -0.14
COLCA1-201ENST00000355430 ERCC6L2Q5T890 1561 aa14.2□□□□□ -0.14
COLCA1-201ENST00000355430 IRS4O14654 1257 aaPredicted RBP14.2□□□□□ -0.14
COLCA1-201ENST00000355430 EPB41L2O43491 1005 aaKnown RBP14.2□□□□□ -0.14
COLCA1-201ENST00000355430 BICC1Q9H694 974 aaKnown RBP14.2□□□□□ -0.14
COLCA1-201ENST00000355430 TNNI2P48788 182 aa14.2□□□□□ -0.14
COLCA1-201ENST00000355430 GOLGA8AA7E2F4 631 aa14.2□□□□□ -0.14
COLCA1-201ENST00000355430 MYCNP04198 464 aaPredicted RBP14.2□□□□□ -0.14
COLCA1-201ENST00000355430 ARHGAP29Q52LW3 1261 aa14.2□□□□□ -0.14
COLCA1-201ENST00000355430 EIF3JO75822 258 aaKnown RBP14.19□□□□□ -0.14
COLCA1-201ENST00000355430 MRPS27Q92552 414 aaKnown RBP14.19□□□□□ -0.14
COLCA1-201ENST00000355430 CEP131Q9UPN4 1083 aa14.19□□□□□ -0.14
COLCA1-201ENST00000355430 GJA3Q9Y6H8 435 aa14.19□□□□□ -0.14
COLCA1-201ENST00000355430 SLC27A2O14975 620 aa14.19□□□□□ -0.14
COLCA1-201ENST00000355430 ZNHIT6Q9NWK9 470 aaKnown RBP14.19□□□□□ -0.14
COLCA1-201ENST00000355430 SPHKAPQ2M3C7 1700 aa14.19□□□□□ -0.14
COLCA1-201ENST00000355430 KLF18A0A0U1RQI7 1052 aa14.19□□□□□ -0.14
COLCA1-201ENST00000355430 TERF1P54274 439 aa14.19□□□□□ -0.14
COLCA1-201ENST00000355430 PDE4BQ07343 736 aa14.19□□□□□ -0.14
COLCA1-201ENST00000355430 APOBRQ0VD83 1088 aa14.19□□□□□ -0.14
COLCA1-201ENST00000355430 RBM26Q5T8P6 1007 aaKnown RBP14.19□□□□□ -0.14
COLCA1-201ENST00000355430 TAF3Q5VWG9 929 aa14.19□□□□□ -0.14
COLCA1-201ENST00000355430 LINS1Q8NG48 757 aa14.19□□□□□ -0.14
COLCA1-201ENST00000355430 ZNF500O60304 480 aaPredicted RBP14.19□□□□□ -0.14
COLCA1-201ENST00000355430 NBPF7P0C2Y1 421 aaPredicted RBP14.19□□□□□ -0.14
COLCA1-201ENST00000355430 AXDND1Q5T1B0 1012 aaPredicted RBP14.19□□□□□ -0.14
COLCA1-201ENST00000355430 CHST3Q7LGC8 479 aa14.19□□□□□ -0.14
COLCA1-201ENST00000355430 FAM227BQ96M60 508 aa14.19□□□□□ -0.14
COLCA1-201ENST00000355430 RANBP6O60518 1105 aaKnown RBP14.18□□□□□ -0.14
COLCA1-201ENST00000355430 MYRIPQ8NFW9 859 aa14.18□□□□□ -0.14
COLCA1-201ENST00000355430 RPS6KB1P23443 525 aa14.18□□□□□ -0.14
COLCA1-201ENST00000355430 SSRP1Q08945 709 aaKnown RBP14.18□□□□□ -0.14
COLCA1-201ENST00000355430 VEZTQ9HBM0 779 aa14.18□□□□□ -0.14
COLCA1-201ENST00000355430 SLC12A7Q9Y666 1083 aa14.18□□□□□ -0.14
COLCA1-201ENST00000355430 PDE6BP35913 854 aa14.18□□□□□ -0.14
COLCA1-201ENST00000355430 CPLX3Q8WVH0 158 aa14.18□□□□□ -0.14
COLCA1-201ENST00000355430 CCDC102AQ96A19 550 aa14.18□□□□□ -0.14
COLCA1-201ENST00000355430 RIMBP3CA6NJZ7 1639 aa14.18□□□□□ -0.14
COLCA1-201ENST00000355430 RIMBP3BA6NNM3 1639 aa14.18□□□□□ -0.14
COLCA1-201ENST00000355430 LAMC1P11047 1609 aa14.18□□□□□ -0.14
COLCA1-201ENST00000355430 RIMBP3Q9UFD9 1639 aa14.18□□□□□ -0.14
COLCA1-201ENST00000355430 CTCFLQ8NI51 663 aaPredicted RBP14.18□□□□□ -0.14
COLCA1-201ENST00000355430 ERVV-2B6SEH9 535 aa14.17□□□□□ -0.14
COLCA1-201ENST00000355430 F8W031 263 aaPredicted RBP14.17□□□□□ -0.14
COLCA1-201ENST00000355430 TFCP2Q12800 502 aa14.17□□□□□ -0.14
COLCA1-201ENST00000355430 ATP2B3Q16720 1220 aa14.17□□□□□ -0.14
COLCA1-201ENST00000355430 UNC5CLQ8IV45 518 aa14.17□□□□□ -0.14
COLCA1-201ENST00000355430 NCOA7Q8NI08 942 aa14.17□□□□□ -0.14
COLCA1-201ENST00000355430 CDC42BPBQ9Y5S2 1711 aa14.17□□□□□ -0.14
COLCA1-201ENST00000355430 MICU3Q86XE3 530 aa14.17□□□□□ -0.14
COLCA1-201ENST00000355430 RIOK3O14730 519 aaKnown RBP14.17□□□□□ -0.14
COLCA1-201ENST00000355430 CCDC196A0A1B0GTZ2 297 aa14.17□□□□□ -0.14
COLCA1-201ENST00000355430 PTPDC1A2A3K4 754 aa14.17□□□□□ -0.14
COLCA1-201ENST00000355430 STIM1Q13586 685 aa14.17□□□□□ -0.14
COLCA1-201ENST00000355430 ZNF790Q6PG37 636 aa14.17□□□□□ -0.14
COLCA1-201ENST00000355430 IFIT3O14879 490 aaKnown RBP14.16□□□□□ -0.14
COLCA1-201ENST00000355430 METAP2P50579 478 aaKnown RBP eCLIP14.16□□□□□ -0.14
COLCA1-201ENST00000355430 FAM193AP78312 1265 aa14.16□□□□□ -0.14
COLCA1-201ENST00000355430 LMBR1LQ6UX01 489 aa14.16□□□□□ -0.14
COLCA1-201ENST00000355430 CDC37L1Q7L3B6 337 aa14.16□□□□□ -0.14
COLCA1-201ENST00000355430 SLC52A2Q9HAB3 445 aa14.16□□□□□ -0.14
COLCA1-201ENST00000355430 RIMBP2O15034 1052 aa14.16□□□□□ -0.14
COLCA1-201ENST00000355430 KIF5CO60282 957 aa14.16□□□□□ -0.14
COLCA1-201ENST00000355430 SYKP43405 635 aa14.16□□□□□ -0.14
COLCA1-201ENST00000355430 CCDC129Q6ZRS4 1044 aa14.16□□□□□ -0.14
COLCA1-201ENST00000355430 KRT222Q8N1A0 295 aa14.16□□□□□ -0.14
COLCA1-201ENST00000355430 PLCG2P16885 1265 aa14.16□□□□□ -0.14
COLCA1-201ENST00000355430 IL15P40933 162 aaPredicted RBP14.16□□□□□ -0.14
COLCA1-201ENST00000355430 CBX8Q9HC52 389 aa14.16□□□□□ -0.14
COLCA1-201ENST00000355430 BABAM1Q9NWV8 329 aa14.16□□□□□ -0.14
COLCA1-201ENST00000355430 FAM135BQ49AJ0 1406 aa14.16□□□□□ -0.14
COLCA1-201ENST00000355430 ALDH1B1P30837 517 aa14.16□□□□□ -0.14
COLCA1-201ENST00000355430 IARSP41252 1262 aaKnown RBP14.16□□□□□ -0.14
COLCA1-201ENST00000355430 KCNG4Q8TDN1 519 aa14.16□□□□□ -0.14
COLCA1-201ENST00000355430 TSC1Q92574 1164 aa14.16□□□□□ -0.14
COLCA1-201ENST00000355430 SCLT1Q96NL6 688 aa14.16□□□□□ -0.14
COLCA1-201ENST00000355430 IGSF3O75054 1194 aa14.15□□□□□ -0.14
COLCA1-201ENST00000355430 MARCKSP29966 332 aaPredicted RBP14.15□□□□□ -0.14
COLCA1-201ENST00000355430 UBASH3AP57075 661 aa14.15□□□□□ -0.14
COLCA1-201ENST00000355430 KIF4BQ2VIQ3 1234 aa14.15□□□□□ -0.14
COLCA1-201ENST00000355430 HSP90AA4PQ58FG1 418 aa14.15□□□□□ -0.14
COLCA1-201ENST00000355430 PPP4R3AQ6IN85 833 aa14.15□□□□□ -0.14
COLCA1-201ENST00000355430 PAG1Q9NWQ8 432 aa14.15□□□□□ -0.14
COLCA1-201ENST00000355430 SSH2Q76I76 1423 aa14.15□□□□□ -0.14
COLCA1-201ENST00000355430 CHMP4BP1P59074 171 aa14.15□□□□□ -0.14
COLCA1-201ENST00000355430 ZNF853P0CG23 659 aa14.15□□□□□ -0.14
COLCA1-201ENST00000355430 BMS1Q14692 1282 aaKnown RBP14.15□□□□□ -0.14
COLCA1-201ENST00000355430 LARGE2Q8N3Y3 721 aa14.15□□□□□ -0.14
COLCA1-201ENST00000355430 KLHDC4Q8TBB5 520 aa14.15□□□□□ -0.14
COLCA1-201ENST00000355430 BMP2KQ9NSY1 1161 aaPredicted RBP14.15□□□□□ -0.14
COLCA1-201ENST00000355430 TMEM67Q5HYA8 995 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms