RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 HDXQ7Z353 690 aa9.09□□□□□ -0.95
CD46-203ENST00000354848 FCHSD1Q86WN1 690 aa9.09□□□□□ -0.95
CD46-203ENST00000354848 SDF4Q9BRK5 362 aa9.09□□□□□ -0.95
CD46-203ENST00000354848 FANCCQ00597 558 aa9.09□□□□□ -0.96
CD46-203ENST00000354848 TADA2BQ86TJ2 420 aa9.09□□□□□ -0.96
CD46-203ENST00000354848 KIFC2Q96AC6 838 aa9.09□□□□□ -0.96
CD46-203ENST00000354848 DHX58Q96C10 678 aa9.09□□□□□ -0.96
CD46-203ENST00000354848 USP28Q96RU2 1077 aa9.09□□□□□ -0.96
CD46-203ENST00000354848 PLEKHA4Q9H4M7 779 aa9.09□□□□□ -0.96
CD46-203ENST00000354848 DONSONQ9NYP3 566 aa9.09□□□□□ -0.96
CD46-203ENST00000354848 KIAA1468Q9P260 1216 aa9.09□□□□□ -0.96
CD46-203ENST00000354848 NPHP4O75161 1426 aaPredicted RBP9.08□□□□□ -0.96
CD46-203ENST00000354848 ERCC6L2Q5T890 1561 aa9.08□□□□□ -0.96
CD46-203ENST00000354848 LMOD1P29536 600 aaPredicted RBP9.08□□□□□ -0.96
CD46-203ENST00000354848 GOLGA8FQ08AF8 430 aa9.08□□□□□ -0.96
CD46-203ENST00000354848 GOLGA8DPQ0D2H9 430 aa9.08□□□□□ -0.96
CD46-203ENST00000354848 FMR1NBQ8N0W7 255 aaPredicted RBP9.08□□□□□ -0.96
CD46-203ENST00000354848 MSL3Q8N5Y2 521 aaKnown RBP9.08□□□□□ -0.96
CD46-203ENST00000354848 EIF3JO75822 258 aaKnown RBP9.08□□□□□ -0.96
CD46-203ENST00000354848 ATP1A3P13637 1013 aa9.08□□□□□ -0.96
CD46-203ENST00000354848 ME1P48163 572 aa9.08□□□□□ -0.96
CD46-203ENST00000354848 ZRSR1Q15695 479 aaKnown RBP9.08□□□□□ -0.96
CD46-203ENST00000354848 TMEM139Q8IV31 216 aa9.08□□□□□ -0.96
CD46-203ENST00000354848 FAM227BQ96M60 508 aa9.08□□□□□ -0.96
CD46-203ENST00000354848 BICC1Q9H694 974 aaKnown RBP9.08□□□□□ -0.96
CD46-203ENST00000354848 ANKZF1Q9H8Y5 726 aa9.08□□□□□ -0.96
CD46-203ENST00000354848 SUGCTQ9HAC7 445 aa9.08□□□□□ -0.96
CD46-203ENST00000354848 A0A087WUV0 522 aaPredicted RBP9.07□□□□□ -0.96
CD46-203ENST00000354848 NRKQ7Z2Y5 1582 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 CNNM3Q8NE01 707 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 NECTIN2Q92692 538 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 ZSWIM4Q9H7M6 989 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 L1RE1Q9UN81 338 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 MYO5BQ9ULV0 1848 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 EDC4Q6P2E9 1401 aaKnown RBP9.07□□□□□ -0.96
CD46-203ENST00000354848 POGZQ7Z3K3 1410 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 ARHGAP6O43182 974 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 PPFIA4O75335 1185 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 MAP2K2P36507 400 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 USP5P45974 858 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 IDI1Q13907 227 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 EIF4A2Q14240 407 aaKnown RBP9.07□□□□□ -0.96
CD46-203ENST00000354848 MICALL1Q8N3F8 863 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 DPF2Q92785 391 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 HSD3B7Q9H2F3 369 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 NEDD4P46934 1319 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 A0A1B0GVL5 298 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 BIN1O00499 593 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 PHACTR2O75167 634 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 CHMP4BP1P59074 171 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 NMIQ13287 307 aaPredicted RBP9.07□□□□□ -0.96
CD46-203ENST00000354848 WWC2Q6AWC2 1192 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 GGT6Q6P531 493 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 ANKRD20A12PQ8NF67 263 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 DNAAF4Q8WXU2 420 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 MRPS27Q92552 414 aaKnown RBP9.07□□□□□ -0.96
CD46-203ENST00000354848 PNKPQ96T60 521 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 KCNG1Q9UIX4 513 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 RAB21Q9UL25 225 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 SUFUQ9UMX1 484 aa9.07□□□□□ -0.96
CD46-203ENST00000354848 PXDNLA1KZ92 1463 aa9.06□□□□□ -0.96
CD46-203ENST00000354848 GOLGA6L9A6NEM1 432 aa9.06□□□□□ -0.96
CD46-203ENST00000354848 ATP6V1AP38606 617 aa9.06□□□□□ -0.96
CD46-203ENST00000354848 FOSBP53539 338 aa9.06□□□□□ -0.96
CD46-203ENST00000354848 UBASH3AP57075 661 aa9.06□□□□□ -0.96
CD46-203ENST00000354848 ERC1Q8IUD2 1116 aa9.06□□□□□ -0.96
CD46-203ENST00000354848 FAM71BQ8TC56 605 aa9.06□□□□□ -0.96
CD46-203ENST00000354848 EVI5LQ96CN4 794 aa9.06□□□□□ -0.96
CD46-203ENST00000354848 COG3Q96JB2 828 aa9.06□□□□□ -0.96
CD46-203ENST00000354848 ABCB6Q9NP58 842 aa9.06□□□□□ -0.96
CD46-203ENST00000354848 PCDHA7Q9UN72 937 aa9.06□□□□□ -0.96
CD46-203ENST00000354848 NDUFA8P51970 172 aa9.06□□□□□ -0.96
CD46-203ENST00000354848 NLRP12P59046 1061 aa9.06□□□□□ -0.96
CD46-203ENST00000354848 PTPN21Q16825 1174 aa9.06□□□□□ -0.96
CD46-203ENST00000354848 DNAJC21Q5F1R6 531 aaKnown RBP9.06□□□□□ -0.96
CD46-203ENST00000354848 CCDC102AQ96A19 550 aa9.06□□□□□ -0.96
CD46-203ENST00000354848 ECHDC1Q9NTX5 307 aa9.06□□□□□ -0.96
CD46-203ENST00000354848 ABCC6O95255 1503 aa9.06□□□□□ -0.96
CD46-203ENST00000354848 FOXO3O43524 673 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 KIF1CO43896 1103 aaKnown RBP9.05□□□□□ -0.96
CD46-203ENST00000354848 ERLIN1O75477 346 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 HSP90B2PQ58FF3 399 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 SRGAP1Q7Z6B7 1085 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 CCDC12Q8WUD4 166 aaPredicted RBP9.05□□□□□ -0.96
CD46-203ENST00000354848 KAT2BQ92831 832 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 ZNF396Q96N95 335 aaPredicted RBP9.05□□□□□ -0.96
CD46-203ENST00000354848 FAM204AQ9H8W3 233 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 IKBKBO14920 756 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 CUTAO60888 179 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 EIF5P55010 431 aaKnown RBP9.05□□□□□ -0.96
CD46-203ENST00000354848 CASP8Q14790 479 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 PLEKHO1Q53GL0 409 aaPredicted RBP9.05□□□□□ -0.96
CD46-203ENST00000354848 NAA16Q6N069 864 aaPredicted RBP9.05□□□□□ -0.96
CD46-203ENST00000354848 VSTM4Q8IW00 320 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 MSANTD4Q8NCY6 345 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 MED4Q9NPJ6 270 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 A0A0D9SFI3 127 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 TMEM232C9JQI7 657 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 SERPINC1P01008 464 aa9.05□□□□□ -0.96
CD46-203ENST00000354848 TOP1P11387 765 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms