RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 BCAMP50895 628 aa14.41□□□□□ -0.1
PCDHB11-201ENST00000354757 PDILTQ8N807 584 aa14.41□□□□□ -0.1
PCDHB11-201ENST00000354757 KBTBD3Q8NAB2 608 aa14.41□□□□□ -0.1
PCDHB11-201ENST00000354757 ATG3Q9NT62 314 aa14.41□□□□□ -0.1
PCDHB11-201ENST00000354757 WTAPQ15007 396 aa14.41□□□□□ -0.1
PCDHB11-201ENST00000354757 CATIPQ7Z7H3 387 aa14.41□□□□□ -0.1
PCDHB11-201ENST00000354757 NCOA5Q9HCD5 579 aaKnown RBP14.41□□□□□ -0.1
PCDHB11-201ENST00000354757 USP31Q70CQ4 1352 aa14.41□□□□□ -0.1
PCDHB11-201ENST00000354757 PTCH1Q13635 1447 aa14.41□□□□□ -0.1
PCDHB11-201ENST00000354757 B4E1Z4 1266 aa14.41□□□□□ -0.1
PCDHB11-201ENST00000354757 RPS8P62241 208 aaKnown RBP14.41□□□□□ -0.1
PCDHB11-201ENST00000354757 PTH1RQ03431 593 aa14.41□□□□□ -0.1
PCDHB11-201ENST00000354757 CCDC47Q96A33 483 aaKnown RBP14.41□□□□□ -0.1
PCDHB11-201ENST00000354757 SMC2O95347 1197 aa14.4□□□□□ -0.1
PCDHB11-201ENST00000354757 CDK5RAP3Q96JB5 506 aa14.4□□□□□ -0.1
PCDHB11-201ENST00000354757 HIBADHP31937 336 aaKnown RBP14.4□□□□□ -0.1
PCDHB11-201ENST00000354757 TTLL5Q6EMB2 1281 aa14.4□□□□□ -0.1
PCDHB11-201ENST00000354757 RIMS1Q86UR5 1692 aaKnown RBP14.4□□□□□ -0.1
PCDHB11-201ENST00000354757 KDM4FA0A1W2PPD8 638 aa14.4□□□□□ -0.1
PCDHB11-201ENST00000354757 ZBTB43O43298 467 aa14.4□□□□□ -0.1
PCDHB11-201ENST00000354757 ANAPC15P60006 121 aa14.4□□□□□ -0.1
PCDHB11-201ENST00000354757 HMGN5P82970 282 aaKnown RBP14.4□□□□□ -0.1
PCDHB11-201ENST00000354757 PDE4BQ07343 736 aa14.4□□□□□ -0.1
PCDHB11-201ENST00000354757 ISM2Q6H9L7 571 aa14.4□□□□□ -0.1
PCDHB11-201ENST00000354757 OLFM4Q6UX06 510 aa14.4□□□□□ -0.1
PCDHB11-201ENST00000354757 CCAR2Q8N163 923 aaKnown RBP14.4□□□□□ -0.1
PCDHB11-201ENST00000354757 SAP30BPQ9UHR5 308 aaKnown RBP14.4□□□□□ -0.1
PCDHB11-201ENST00000354757 CNPY2Q9Y2B0 182 aa14.4□□□□□ -0.1
PCDHB11-201ENST00000354757 SNX14Q9Y5W7 946 aa14.4□□□□□ -0.1
PCDHB11-201ENST00000354757 IBTKQ9P2D0 1353 aaPredicted RBP14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 CCDC173Q0VFZ6 552 aa14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 SPTY2D1Q68D10 685 aaPredicted RBP14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 PRDM10Q9NQV6 1147 aa14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 OVOS2A0A0J9YW53 1432 aa14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 OVOS2Q6IE36 1432 aa14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 CCDC196A0A1B0GTZ2 297 aa14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 LDHBP07195 334 aaKnown RBP14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 LPIN2Q92539 896 aa14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 NRXN1Q9ULB1 1477 aa14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 PCCAP05165 728 aaPredicted RBP14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 CCDC192P0DO97 292 aa14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 PHKA1P46020 1223 aa14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 DNM1Q05193 864 aaKnown RBP14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 ZNF804AQ7Z570 1209 aa14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 MYL10Q9BUA6 226 aa14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 ANTXR1Q9H6X2 564 aa14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 ZNF287Q9HBT7 754 aa14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 AATFQ9NY61 560 aaKnown RBP eCLIP14.39□□□□□ -0.11
PCDHB11-201ENST00000354757 MROH1Q8NDA8 1641 aa14.38□□□□□ -0.11
PCDHB11-201ENST00000354757 BIN1O00499 593 aa14.38□□□□□ -0.11
PCDHB11-201ENST00000354757 SSRP1Q08945 709 aaKnown RBP14.38□□□□□ -0.11
PCDHB11-201ENST00000354757 VWDEQ8N2E2 1590 aa14.38□□□□□ -0.11
PCDHB11-201ENST00000354757 SLC27A2O14975 620 aa14.38□□□□□ -0.11
PCDHB11-201ENST00000354757 TXLNAP40222 546 aa14.38□□□□□ -0.11
PCDHB11-201ENST00000354757 NLRP5P59047 1200 aa14.38□□□□□ -0.11
PCDHB11-201ENST00000354757 SLFNL1Q499Z3 407 aa14.38□□□□□ -0.11
PCDHB11-201ENST00000354757 IL6STP40189 918 aaPredicted RBP14.38□□□□□ -0.11
PCDHB11-201ENST00000354757 NLRP10Q86W26 655 aa14.38□□□□□ -0.11
PCDHB11-201ENST00000354757 KAT14Q9H8E8 782 aa14.38□□□□□ -0.11
PCDHB11-201ENST00000354757 VEZTQ9HBM0 779 aa14.38□□□□□ -0.11
PCDHB11-201ENST00000354757 NOL7Q9UMY1 257 aaKnown RBP14.38□□□□□ -0.11
PCDHB11-201ENST00000354757 ZNF532Q9HCE3 1301 aa14.38□□□□□ -0.11
PCDHB11-201ENST00000354757 NBPF26B4DH59 902 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 NBPF14Q5TI25 921 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 NBPF10Q6P3W6 841 aaKnown RBP14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 NBPF15Q8N660 670 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 ESR2Q92731 530 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 CHAMP1Q96JM3 812 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 AFF2P51816 1311 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 TMEM131LA2VDJ0 1609 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 SASH1O94885 1247 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 TSPY3P0CV98 308 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 TSPY8P0CW00 308 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 RBM25P49756 843 aaKnown RBP14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 TSR1Q2NL82 804 aaKnown RBP14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 ZSCAN30Q86W11 494 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 SEC63Q9UGP8 760 aaKnown RBP14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 UQCRHLA0A096LP55 91 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 KRT18P05783 430 aaKnown RBP14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 UQCRHP07919 91 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 IFIT1BQ5T764 474 aaKnown RBP14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 CCAR1Q8IX12 1150 aaKnown RBP14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 PDCL3Q9H2J4 239 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 SPATA31D1Q6ZQQ2 1576 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 PTPN12Q05209 780 aaKnown RBP14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 CCDC102BQ68D86 513 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 OTUD7BQ6GQQ9 843 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 RUFY3Q7L099 469 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 DHX32Q7L7V1 743 aaKnown RBP14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 SLF2Q8IX21 1173 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 APPBP2Q92624 585 aa14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 SCAND2PQ9GZW5 306 aaPredicted RBP14.37□□□□□ -0.11
PCDHB11-201ENST00000354757 ATP5JP18859 108 aa14.36□□□□□ -0.11
PCDHB11-201ENST00000354757 SPATA5Q8NB90 893 aa14.36□□□□□ -0.11
PCDHB11-201ENST00000354757 ANKRD20A12PQ8NF67 263 aa14.36□□□□□ -0.11
PCDHB11-201ENST00000354757 WASF1Q92558 559 aa14.36□□□□□ -0.11
PCDHB11-201ENST00000354757 COPRSQ9NQ92 184 aa14.36□□□□□ -0.11
PCDHB11-201ENST00000354757 STK32BQ9NY57 414 aa14.36□□□□□ -0.11
PCDHB11-201ENST00000354757 PALLDQ8WX93 1383 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms