RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 C14orf37Q86TY3 774 aa13.32□□□□□ -0.28
CAPN9-202ENST00000354537 ARHGEF25Q86VW2 580 aa13.32□□□□□ -0.28
CAPN9-202ENST00000354537 ZNF592Q92610 1267 aa13.32□□□□□ -0.28
CAPN9-202ENST00000354537 USP16Q9Y5T5 823 aa13.32□□□□□ -0.28
CAPN9-202ENST00000354537 PLEKHG2Q9H7P9 1386 aa13.32□□□□□ -0.28
CAPN9-202ENST00000354537 TFCP2Q12800 502 aa13.32□□□□□ -0.28
CAPN9-202ENST00000354537 TERF2Q15554 542 aa13.32□□□□□ -0.28
CAPN9-202ENST00000354537 STOX1Q6ZVD7 989 aa13.32□□□□□ -0.28
CAPN9-202ENST00000354537 RGPD2P0DJD1 1756 aa13.31□□□□□ -0.28
CAPN9-202ENST00000354537 YEATS4O95619 227 aa13.31□□□□□ -0.28
CAPN9-202ENST00000354537 ARID5BQ14865 1188 aa13.31□□□□□ -0.28
CAPN9-202ENST00000354537 EPHA10Q5JZY3 1008 aa13.31□□□□□ -0.28
CAPN9-202ENST00000354537 FILIP1Q7Z7B0 1213 aa13.31□□□□□ -0.28
CAPN9-202ENST00000354537 KCNG4Q8TDN1 519 aa13.31□□□□□ -0.28
CAPN9-202ENST00000354537 ME1P48163 572 aa13.31□□□□□ -0.28
CAPN9-202ENST00000354537 NAA30Q147X3 362 aaPredicted RBP13.31□□□□□ -0.28
CAPN9-202ENST00000354537 NBPF11Q86T75 865 aa13.31□□□□□ -0.28
CAPN9-202ENST00000354537 AOPEPQ8N6M6 819 aa13.31□□□□□ -0.28
CAPN9-202ENST00000354537 LRRC59Q96AG4 307 aaKnown RBP13.31□□□□□ -0.28
CAPN9-202ENST00000354537 KIAA1468Q9P260 1216 aa13.31□□□□□ -0.28
CAPN9-202ENST00000354537 KIF13AQ9H1H9 1805 aa13.3□□□□□ -0.28
CAPN9-202ENST00000354537 PRAMEF22A3QJZ6 481 aa13.3□□□□□ -0.28
CAPN9-202ENST00000354537 MYO1BO43795 1136 aa13.3□□□□□ -0.28
CAPN9-202ENST00000354537 AIMP1Q12904 312 aaKnown RBP13.3□□□□□ -0.28
CAPN9-202ENST00000354537 BMS1Q14692 1282 aaKnown RBP13.3□□□□□ -0.28
CAPN9-202ENST00000354537 CCDC93Q567U6 631 aa13.3□□□□□ -0.28
CAPN9-202ENST00000354537 EDC3Q96F86 508 aaKnown RBP13.3□□□□□ -0.28
CAPN9-202ENST00000354537 PCDHA7Q9UN72 937 aa13.3□□□□□ -0.28
CAPN9-202ENST00000354537 PDIA3P30101 505 aaKnown RBP13.3□□□□□ -0.28
CAPN9-202ENST00000354537 CEBPZQ03701 1054 aaKnown RBP13.3□□□□□ -0.28
CAPN9-202ENST00000354537 ZMYM1Q5SVZ6 1142 aa13.3□□□□□ -0.28
CAPN9-202ENST00000354537 ZNF790Q6PG37 636 aa13.3□□□□□ -0.28
CAPN9-202ENST00000354537 KLHDC4Q8TBB5 520 aa13.3□□□□□ -0.28
CAPN9-202ENST00000354537 MYD88Q99836 296 aa13.3□□□□□ -0.28
CAPN9-202ENST00000354537 POLR3EQ9NVU0 708 aa13.3□□□□□ -0.28
CAPN9-202ENST00000354537 CCDC66A2RUB6 948 aa13.29□□□□□ -0.28
CAPN9-202ENST00000354537 IKBKBO14920 756 aa13.29□□□□□ -0.28
CAPN9-202ENST00000354537 H2AFXP16104 143 aaPredicted RBP13.29□□□□□ -0.28
CAPN9-202ENST00000354537 NLRP12P59046 1061 aa13.29□□□□□ -0.28
CAPN9-202ENST00000354537 PSME1Q06323 249 aa13.29□□□□□ -0.28
CAPN9-202ENST00000354537 ZRSR1Q15695 479 aaKnown RBP13.29□□□□□ -0.28
CAPN9-202ENST00000354537 ANKRD13DQ6ZTN6 518 aa13.29□□□□□ -0.28
CAPN9-202ENST00000354537 BRAPQ7Z569 592 aa13.29□□□□□ -0.28
CAPN9-202ENST00000354537 ILDR1Q86SU0 546 aaPredicted RBP13.29□□□□□ -0.28
CAPN9-202ENST00000354537 XAGE3Q8WTP9 111 aa13.29□□□□□ -0.28
CAPN9-202ENST00000354537 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.29□□□□□ -0.28
CAPN9-202ENST00000354537 SDF4Q9BRK5 362 aa13.29□□□□□ -0.28
CAPN9-202ENST00000354537 CARMIL3Q8ND23 1372 aa13.29□□□□□ -0.28
CAPN9-202ENST00000354537 APOBRQ0VD83 1088 aa13.29□□□□□ -0.28
CAPN9-202ENST00000354537 E4F1Q66K89 784 aaPredicted RBP13.29□□□□□ -0.28
CAPN9-202ENST00000354537 FBXO38Q6PIJ6 1188 aa13.29□□□□□ -0.28
CAPN9-202ENST00000354537 CCDC129Q6ZRS4 1044 aa13.29□□□□□ -0.28
CAPN9-202ENST00000354537 LINC00301Q8NCQ3 95 aa13.29□□□□□ -0.28
CAPN9-202ENST00000354537 ANKRD24Q8TF21 1146 aa13.29□□□□□ -0.28
CAPN9-202ENST00000354537 DBNDD2Q9BQY9 259 aa13.29□□□□□ -0.28
CAPN9-202ENST00000354537 SPEF2Q9C093 1822 aa13.28□□□□□ -0.28
CAPN9-202ENST00000354537 E7EWF7 191 aa13.28□□□□□ -0.28
CAPN9-202ENST00000354537 DHX16O60231 1041 aaKnown RBP13.28□□□□□ -0.28
CAPN9-202ENST00000354537 GCP02774 474 aa13.28□□□□□ -0.28
CAPN9-202ENST00000354537 COPS6Q7L5N1 327 aa13.28□□□□□ -0.28
CAPN9-202ENST00000354537 LRP10Q7Z4F1 713 aa13.28□□□□□ -0.28
CAPN9-202ENST00000354537 PPP1R13BQ96KQ4 1090 aa13.28□□□□□ -0.28
CAPN9-202ENST00000354537 TIGD1Q96MW7 591 aa13.28□□□□□ -0.28
CAPN9-202ENST00000354537 SEC62Q99442 399 aaKnown RBP13.28□□□□□ -0.28
CAPN9-202ENST00000354537 DNAJC2Q99543 621 aaKnown RBP13.28□□□□□ -0.28
CAPN9-202ENST00000354537 SRRTQ9BXP5 876 aaKnown RBP13.28□□□□□ -0.28
CAPN9-202ENST00000354537 LAMA4Q16363 1823 aa13.28□□□□□ -0.28
CAPN9-202ENST00000354537 SFPQP23246 707 aaKnown RBP eCLIP13.28□□□□□ -0.28
CAPN9-202ENST00000354537 SLC52A2Q9HAB3 445 aa13.28□□□□□ -0.28
CAPN9-202ENST00000354537 ERBB3P21860 1342 aa13.28□□□□□ -0.28
CAPN9-202ENST00000354537 PHLPP2Q6ZVD8 1323 aa13.28□□□□□ -0.28
CAPN9-202ENST00000354537 CEBPAP49715 358 aaPredicted RBP13.27□□□□□ -0.29
CAPN9-202ENST00000354537 ELF2Q15723 593 aa13.27□□□□□ -0.29
CAPN9-202ENST00000354537 LRRFIP1Q32MZ4 808 aaKnown RBP13.27□□□□□ -0.29
CAPN9-202ENST00000354537 FCHSD1Q86WN1 690 aa13.27□□□□□ -0.29
CAPN9-202ENST00000354537 PAG1Q9NWQ8 432 aa13.27□□□□□ -0.29
CAPN9-202ENST00000354537 TRMT1Q9NXH9 659 aaKnown RBP13.27□□□□□ -0.29
CAPN9-202ENST00000354537 ATP8B1O43520 1251 aa13.27□□□□□ -0.29
CAPN9-202ENST00000354537 TPM1P09493 284 aa13.27□□□□□ -0.29
CAPN9-202ENST00000354537 CASP7P55210 303 aa13.27□□□□□ -0.29
CAPN9-202ENST00000354537 FTOQ9C0B1 505 aaKnown RBP eCLIP13.27□□□□□ -0.29
CAPN9-202ENST00000354537 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.29
CAPN9-202ENST00000354537 C5P01031 1676 aa13.26□□□□□ -0.29
CAPN9-202ENST00000354537 WDR19Q8NEZ3 1342 aa13.26□□□□□ -0.29
CAPN9-202ENST00000354537 CBFA2T2O43439 604 aa13.26□□□□□ -0.29
CAPN9-202ENST00000354537 HSPD1P10809 573 aaKnown RBP13.26□□□□□ -0.29
CAPN9-202ENST00000354537 FDPSP14324 419 aaKnown RBP13.26□□□□□ -0.29
CAPN9-202ENST00000354537 CMA1P23946 247 aa13.26□□□□□ -0.29
CAPN9-202ENST00000354537 STK38Q15208 465 aa13.26□□□□□ -0.29
CAPN9-202ENST00000354537 ARMCX5Q6P1M9 558 aa13.26□□□□□ -0.29
CAPN9-202ENST00000354537 DDX46Q7L014 1031 aaKnown RBP13.26□□□□□ -0.29
CAPN9-202ENST00000354537 LRRC2Q9BYS8 371 aa13.26□□□□□ -0.29
CAPN9-202ENST00000354537 XPO4Q9C0E2 1151 aaKnown RBP13.26□□□□□ -0.29
CAPN9-202ENST00000354537 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.26□□□□□ -0.29
CAPN9-202ENST00000354537 SPTLC2O15270 562 aa13.25□□□□□ -0.29
CAPN9-202ENST00000354537 RNF113AO15541 343 aaKnown RBP13.25□□□□□ -0.29
CAPN9-202ENST00000354537 SLC3A2P08195 630 aaKnown RBP13.25□□□□□ -0.29
CAPN9-202ENST00000354537 SNRPA1P09661 255 aaKnown RBP13.25□□□□□ -0.29
CAPN9-202ENST00000354537 NDUFA8P51970 172 aa13.25□□□□□ -0.29
CAPN9-202ENST00000354537 SF3A1Q15459 793 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms