RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 SLC12A7Q9Y666 1083 aa9.05□□□□□ -0.96
SCN8A-201ENST00000354534 CCDC194A0A1B0GVG4 234 aa9.05□□□□□ -0.96
SCN8A-201ENST00000354534 PPP2R5DQ14738 602 aa9.05□□□□□ -0.96
SCN8A-201ENST00000354534 FAM212AQ96EL1 285 aa9.05□□□□□ -0.96
SCN8A-201ENST00000354534 CLSTN2Q9H4D0 955 aa9.05□□□□□ -0.96
SCN8A-201ENST00000354534 WBP4O75554 376 aaKnown RBP9.05□□□□□ -0.96
SCN8A-201ENST00000354534 GNL1P36915 607 aaPredicted RBP9.05□□□□□ -0.96
SCN8A-201ENST00000354534 GABPAQ06546 454 aa9.05□□□□□ -0.96
SCN8A-201ENST00000354534 OGFRQ9NZT2 677 aa9.05□□□□□ -0.96
SCN8A-201ENST00000354534 GDPD2Q9HCC8 539 aa9.05□□□□□ -0.96
SCN8A-201ENST00000354534 SPATS2LQ9NUQ6 558 aaKnown RBP9.05□□□□□ -0.96
SCN8A-201ENST00000354534 NUB1Q9Y5A7 615 aa9.05□□□□□ -0.96
SCN8A-201ENST00000354534 SESN3P58005 492 aa9.05□□□□□ -0.96
SCN8A-201ENST00000354534 CCT2P78371 535 aaKnown RBP9.05□□□□□ -0.96
SCN8A-201ENST00000354534 DDX19AQ9NUU7 478 aaKnown RBP9.05□□□□□ -0.96
SCN8A-201ENST00000354534 IL1RL1Q01638 556 aa9.04□□□□□ -0.96
SCN8A-201ENST00000354534 RMDN2Q96LZ7 410 aa9.04□□□□□ -0.96
SCN8A-201ENST00000354534 CTAGE1Q96RT6 745 aa9.04□□□□□ -0.96
SCN8A-201ENST00000354534 BACH2Q9BYV9 841 aa9.04□□□□□ -0.96
SCN8A-201ENST00000354534 SFMBT1Q9UHJ3 866 aa9.04□□□□□ -0.96
SCN8A-201ENST00000354534 KRT86O43790 486 aa9.04□□□□□ -0.96
SCN8A-201ENST00000354534 CTCFLQ8NI51 663 aaPredicted RBP9.04□□□□□ -0.96
SCN8A-201ENST00000354534 SH2B1Q9NRF2 756 aaPredicted RBP9.04□□□□□ -0.96
SCN8A-201ENST00000354534 SKILP12757 684 aa9.04□□□□□ -0.96
SCN8A-201ENST00000354534 TUBB4BP68371 445 aa9.04□□□□□ -0.96
SCN8A-201ENST00000354534 TFIP11Q9UBB9 837 aaKnown RBP9.04□□□□□ -0.96
SCN8A-201ENST00000354534 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.04□□□□□ -0.96
SCN8A-201ENST00000354534 GRM1Q13255 1194 aa9.04□□□□□ -0.96
SCN8A-201ENST00000354534 RAB11FIP3O75154 756 aa9.04□□□□□ -0.96
SCN8A-201ENST00000354534 KARSQ15046 597 aaKnown RBP9.04□□□□□ -0.96
SCN8A-201ENST00000354534 ZNF444Q8N0Y2 327 aaPredicted RBP9.04□□□□□ -0.96
SCN8A-201ENST00000354534 PPP1R9AQ9ULJ8 1098 aa9.04□□□□□ -0.96
SCN8A-201ENST00000354534 GUCA1BQ9UMX6 200 aa9.04□□□□□ -0.96
SCN8A-201ENST00000354534 RIOK3O14730 519 aaKnown RBP9.04□□□□□ -0.96
SCN8A-201ENST00000354534 SLC4A1P02730 911 aa9.04□□□□□ -0.96
SCN8A-201ENST00000354534 MCM7P33993 719 aa9.04□□□□□ -0.96
SCN8A-201ENST00000354534 GJC2Q5T442 439 aaPredicted RBP9.04□□□□□ -0.96
SCN8A-201ENST00000354534 Q9H521 79 aa9.04□□□□□ -0.96
SCN8A-201ENST00000354534 RANBP6O60518 1105 aaKnown RBP9.04□□□□□ -0.96
SCN8A-201ENST00000354534 RASSF2P50749 326 aa9.04□□□□□ -0.96
SCN8A-201ENST00000354534 KIFC2Q96AC6 838 aa9.04□□□□□ -0.96
SCN8A-201ENST00000354534 LARP6Q9BRS8 491 aaKnown RBP9.04□□□□□ -0.96
SCN8A-201ENST00000354534 UTP11Q9Y3A2 253 aaKnown RBP9.04□□□□□ -0.96
SCN8A-201ENST00000354534 RPS6KA2Q15349 733 aa9.04□□□□□ -0.96
SCN8A-201ENST00000354534 SLMAPQ14BN4 828 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 TMOD2Q9NZR1 351 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 KRT10P13645 584 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 ZNF569Q5MCW4 686 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 ARHGAP25P42331 645 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 RPSAP08865 295 aaKnown RBP9.03□□□□□ -0.96
SCN8A-201ENST00000354534 KRT3P12035 628 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 ZNF219Q9P2Y4 722 aaPredicted RBP9.03□□□□□ -0.96
SCN8A-201ENST00000354534 FAN1Q9Y2M0 1017 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 UBA7P41226 1012 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 SMAP1Q8IYB5 467 aaPredicted RBP9.03□□□□□ -0.96
SCN8A-201ENST00000354534 CCDC26Q8TAB7 109 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 TRIM6Q9C030 488 aaPredicted RBP9.03□□□□□ -0.96
SCN8A-201ENST00000354534 I3L4J1 428 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 GIGYF1O75420 1035 aaPredicted RBP9.03□□□□□ -0.96
SCN8A-201ENST00000354534 WDHD1O75717 1129 aaPredicted RBP9.03□□□□□ -0.96
SCN8A-201ENST00000354534 RIPOR2Q9Y4F9 1068 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 LRRD1A4D1F6 860 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 HNRNPCL2B2RXH8 293 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 HNRNPCL1O60812 293 aaKnown RBP9.03□□□□□ -0.96
SCN8A-201ENST00000354534 IQCA1Q86XH1 822 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 BCAP29Q9UHQ4 241 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 SUFUQ9UMX1 484 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 GOLGA6CA6NDK9 693 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 GOLGA6DP0CG33 693 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 CABP4P57796 275 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 TMTC4Q5T4D3 741 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 NAPBQ9H115 298 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 GOLGA6AQ9NYA3 693 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 AFMP43652 599 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 KRT83P78385 493 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 VTI1AQ96AJ9 217 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 GGNBP2Q9H3C7 697 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 VAT1LQ9HCJ6 419 aa9.03□□□□□ -0.96
SCN8A-201ENST00000354534 SYT1P21579 422 aa9.02□□□□□ -0.96
SCN8A-201ENST00000354534 ANO6Q4KMQ2 910 aa9.02□□□□□ -0.96
SCN8A-201ENST00000354534 GIMAP6Q6P9H5 292 aa9.02□□□□□ -0.96
SCN8A-201ENST00000354534 LZTFL1Q9NQ48 299 aa9.02□□□□□ -0.96
SCN8A-201ENST00000354534 ARHGAP42A6NI28 874 aa9.02□□□□□ -0.96
SCN8A-201ENST00000354534 SLC4A2P04920 1241 aa9.02□□□□□ -0.96
SCN8A-201ENST00000354534 ATP6V1AP38606 617 aa9.02□□□□□ -0.96
SCN8A-201ENST00000354534 GPRASP1Q5JY77 1395 aa9.02□□□□□ -0.96
SCN8A-201ENST00000354534 GFAPP14136 432 aa9.02□□□□□ -0.97
SCN8A-201ENST00000354534 BIRC2Q13490 618 aa9.02□□□□□ -0.97
SCN8A-201ENST00000354534 HELBQ8NG08 1087 aaPredicted RBP9.02□□□□□ -0.97
SCN8A-201ENST00000354534 PIK3R5Q8WYR1 880 aa9.02□□□□□ -0.97
SCN8A-201ENST00000354534 TSGA10Q9BZW7 698 aa9.02□□□□□ -0.97
SCN8A-201ENST00000354534 STAG1Q8WVM7 1258 aa9.02□□□□□ -0.97
SCN8A-201ENST00000354534 PYM1Q9BRP8 204 aaKnown RBP9.02□□□□□ -0.97
SCN8A-201ENST00000354534 THEGQ9P2T0 379 aa9.02□□□□□ -0.97
SCN8A-201ENST00000354534 STAT6P42226 847 aa9.02□□□□□ -0.97
SCN8A-201ENST00000354534 KIF21BO75037 1637 aa9.02□□□□□ -0.97
SCN8A-201ENST00000354534 TBCAO75347 108 aaKnown RBP9.02□□□□□ -0.97
SCN8A-201ENST00000354534 ABTB2Q8N961 1025 aa9.02□□□□□ -0.97
SCN8A-201ENST00000354534 IMPG2Q9BZV3 1241 aa9.02□□□□□ -0.97
SCN8A-201ENST00000354534 NBPF3Q9H094 633 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms