RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 RIMBP3Q9UFD9 1639 aa15.88■□□□□ 0.13
SMC6-201ENST00000351948 ODF2Q5BJF6 829 aa15.88■□□□□ 0.13
SMC6-201ENST00000351948 AATFQ9NY61 560 aaKnown RBP eCLIP15.88■□□□□ 0.13
SMC6-201ENST00000351948 TEX11Q8IYF3 940 aa15.87■□□□□ 0.13
SMC6-201ENST00000351948 ABCC4O15439 1325 aa15.87■□□□□ 0.13
SMC6-201ENST00000351948 SYNMO15061 1565 aa15.87■□□□□ 0.13
SMC6-201ENST00000351948 H0YIN7 160 aa15.87■□□□□ 0.13
SMC6-201ENST00000351948 PIGBQ92521 554 aa15.87■□□□□ 0.13
SMC6-201ENST00000351948 DENND2AQ9ULE3 1009 aa15.87■□□□□ 0.13
SMC6-201ENST00000351948 B4E1Z4 1266 aa15.87■□□□□ 0.13
SMC6-201ENST00000351948 CTSWP56202 376 aa15.87■□□□□ 0.13
SMC6-201ENST00000351948 FAM196AQ6ZSG2 479 aa15.87■□□□□ 0.13
SMC6-201ENST00000351948 CNNM3Q8NE01 707 aa15.87■□□□□ 0.13
SMC6-201ENST00000351948 USP26Q9BXU7 913 aa15.87■□□□□ 0.13
SMC6-201ENST00000351948 PDCL3Q9H2J4 239 aa15.87■□□□□ 0.13
SMC6-201ENST00000351948 LIG1P18858 919 aa15.87■□□□□ 0.13
SMC6-201ENST00000351948 PPFIBP1Q86W92 1011 aa15.87■□□□□ 0.13
SMC6-201ENST00000351948 GOLGA6L1Q8N7Z2 621 aa15.87■□□□□ 0.13
SMC6-201ENST00000351948 RPS8P62241 208 aaKnown RBP15.86■□□□□ 0.13
SMC6-201ENST00000351948 IDEP14735 1019 aa15.86■□□□□ 0.13
SMC6-201ENST00000351948 BAG6P46379 1132 aa15.86■□□□□ 0.13
SMC6-201ENST00000351948 CFAP100Q494V2 611 aa15.86■□□□□ 0.13
SMC6-201ENST00000351948 MNS1Q8NEH6 495 aa15.86■□□□□ 0.13
SMC6-201ENST00000351948 CYP27B1O15528 508 aa15.86■□□□□ 0.13
SMC6-201ENST00000351948 CCDC70Q6NSX1 233 aa15.86■□□□□ 0.13
SMC6-201ENST00000351948 LPIN2Q92539 896 aa15.86■□□□□ 0.13
SMC6-201ENST00000351948 CNPY2Q9Y2B0 182 aa15.86■□□□□ 0.13
SMC6-201ENST00000351948 GPAA1O43292 621 aa15.86■□□□□ 0.13
SMC6-201ENST00000351948 GYG1P46976 350 aa15.86■□□□□ 0.13
SMC6-201ENST00000351948 EAF2Q96CJ1 260 aaPredicted RBP15.86■□□□□ 0.13
SMC6-201ENST00000351948 ALKQ9UM73 1620 aa15.86■□□□□ 0.13
SMC6-201ENST00000351948 PDIA4P13667 645 aaKnown RBP15.85■□□□□ 0.13
SMC6-201ENST00000351948 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.85■□□□□ 0.138e-7■■■■□ 24.2
SMC6-201ENST00000351948 MARCKSP29966 332 aaPredicted RBP15.85■□□□□ 0.13
SMC6-201ENST00000351948 ANAPC15P60006 121 aa15.85■□□□□ 0.13
SMC6-201ENST00000351948 LARGE2Q8N3Y3 721 aa15.85■□□□□ 0.13
SMC6-201ENST00000351948 SMARCE1Q969G3 411 aa15.85■□□□□ 0.13
SMC6-201ENST00000351948 PUS3Q9BZE2 481 aaKnown RBP15.85■□□□□ 0.13
SMC6-201ENST00000351948 RTL1A6NKG5 1358 aa15.85■□□□□ 0.13
SMC6-201ENST00000351948 GREM2Q9H772 168 aa15.85■□□□□ 0.13
SMC6-201ENST00000351948 TNIP1Q15025 636 aa15.85■□□□□ 0.13
SMC6-201ENST00000351948 WWC2Q6AWC2 1192 aa15.85■□□□□ 0.13
SMC6-201ENST00000351948 SAMM50Q9Y512 469 aa15.85■□□□□ 0.13
SMC6-201ENST00000351948 ZSCAN22P10073 491 aaPredicted RBP15.84■□□□□ 0.13
SMC6-201ENST00000351948 SCLT1Q96NL6 688 aa15.84■□□□□ 0.13
SMC6-201ENST00000351948 TMEM266Q2M3C6 531 aa15.84■□□□□ 0.13
SMC6-201ENST00000351948 DEF6Q9H4E7 631 aa15.84■□□□□ 0.13
SMC6-201ENST00000351948 CEP152O94986 1710 aa15.84■□□□□ 0.13
SMC6-201ENST00000351948 TCP10Q12799 353 aa15.84■□□□□ 0.13
SMC6-201ENST00000351948 SEPT12Q8IYM1 358 aa15.84■□□□□ 0.13
SMC6-201ENST00000351948 SEPT11Q9NVA2 429 aaKnown RBP15.84■□□□□ 0.13
SMC6-201ENST00000351948 KDRP35968 1356 aa15.84■□□□□ 0.13
SMC6-201ENST00000351948 GNAT2P19087 354 aa15.84■□□□□ 0.13
SMC6-201ENST00000351948 SYCP1Q15431 976 aa15.84■□□□□ 0.13
SMC6-201ENST00000351948 DHX32Q7L7V1 743 aaKnown RBP15.84■□□□□ 0.13
SMC6-201ENST00000351948 RAB3GAP1Q15042 981 aa15.83■□□□□ 0.13
SMC6-201ENST00000351948 CCDC183Q5T5S1 534 aa15.83■□□□□ 0.13
SMC6-201ENST00000351948 ZNHIT6Q9NWK9 470 aaKnown RBP15.83■□□□□ 0.13
SMC6-201ENST00000351948 MAP3K15Q6ZN16 1313 aa15.83■□□□□ 0.13
SMC6-201ENST00000351948 UNC5CLQ8IV45 518 aa15.83■□□□□ 0.13
SMC6-201ENST00000351948 SPATA5Q8NB90 893 aa15.83■□□□□ 0.13
SMC6-201ENST00000351948 KDM2BQ8NHM5 1336 aa15.83■□□□□ 0.13
SMC6-201ENST00000351948 CCDC12Q8WUD4 166 aaPredicted RBP15.83■□□□□ 0.13
SMC6-201ENST00000351948 ANKARQ7Z5J8 1434 aa15.83■□□□□ 0.12
SMC6-201ENST00000351948 DNM1Q05193 864 aaKnown RBP15.83■□□□□ 0.12
SMC6-201ENST00000351948 PRKG1Q13976 671 aa15.83■□□□□ 0.12
SMC6-201ENST00000351948 ZBTB38Q8NAP3 1195 aaPredicted RBP15.83■□□□□ 0.12
SMC6-201ENST00000351948 CAGE1Q8TC20 777 aa15.83■□□□□ 0.12
SMC6-201ENST00000351948 UBA7P41226 1012 aa15.83■□□□□ 0.12
SMC6-201ENST00000351948 BCAMP50895 628 aa15.83■□□□□ 0.12
SMC6-201ENST00000351948 CCDC173Q0VFZ6 552 aa15.83■□□□□ 0.12
SMC6-201ENST00000351948 NAPAP54920 295 aa15.82■□□□□ 0.12
SMC6-201ENST00000351948 TMTC2Q8N394 836 aa15.82■□□□□ 0.12
SMC6-201ENST00000351948 KBTBD3Q8NAB2 608 aa15.82■□□□□ 0.12
SMC6-201ENST00000351948 ZNF532Q9HCE3 1301 aa15.82■□□□□ 0.12
SMC6-201ENST00000351948 RBM25P49756 843 aaKnown RBP15.82■□□□□ 0.12
SMC6-201ENST00000351948 NOM1Q5C9Z4 860 aaKnown RBP15.82■□□□□ 0.12
SMC6-201ENST00000351948 RUFY3Q7L099 469 aa15.82■□□□□ 0.12
SMC6-201ENST00000351948 NCOA5Q9HCD5 579 aaKnown RBP15.82■□□□□ 0.12
SMC6-201ENST00000351948 RXRBP28702 533 aa15.82■□□□□ 0.12
SMC6-201ENST00000351948 EIF5P55010 431 aaKnown RBP15.82■□□□□ 0.12
SMC6-201ENST00000351948 SSH3Q8TE77 659 aa15.82■□□□□ 0.12
SMC6-201ENST00000351948 SEC62Q99442 399 aaKnown RBP15.82■□□□□ 0.12
SMC6-201ENST00000351948 RAB34Q9BZG1 259 aa15.82■□□□□ 0.12
SMC6-201ENST00000351948 PLCG2P16885 1265 aa15.82■□□□□ 0.12
SMC6-201ENST00000351948 CTDSPL2Q05D32 466 aa15.82■□□□□ 0.12
SMC6-201ENST00000351948 PLS1Q14651 629 aa15.82■□□□□ 0.12
SMC6-201ENST00000351948 ZYXQ15942 572 aaKnown RBP15.82■□□□□ 0.12
SMC6-201ENST00000351948 KRT27Q7Z3Y8 459 aa15.82■□□□□ 0.12
SMC6-201ENST00000351948 APPBP2Q92624 585 aa15.82■□□□□ 0.12
SMC6-201ENST00000351948 MYL10Q9BUA6 226 aa15.82■□□□□ 0.12
SMC6-201ENST00000351948 TCP11L1Q9NUJ3 509 aa15.81■□□□□ 0.12
SMC6-201ENST00000351948 GLI2P10070 1586 aa15.81■□□□□ 0.12
SMC6-201ENST00000351948 PTPDC1A2A3K4 754 aa15.81■□□□□ 0.12
SMC6-201ENST00000351948 GTF2IP78347 998 aa15.81■□□□□ 0.12
SMC6-201ENST00000351948 ENOX2Q16206 610 aaKnown RBP15.81■□□□□ 0.12
SMC6-201ENST00000351948 MAPKAPK5Q8IW41 473 aa15.81■□□□□ 0.12
SMC6-201ENST00000351948 SRP68Q9UHB9 627 aaKnown RBP15.81■□□□□ 0.12
SMC6-201ENST00000351948 UNC13BO14795 1591 aa15.81■□□□□ 0.12
SMC6-201ENST00000351948 HELLSQ9NRZ9 838 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms