RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 MYO1BO43795 1136 aa18.32■□□□□ 0.52
PTPN11-201ENST00000351677 TRIM21P19474 475 aaKnown RBP18.32■□□□□ 0.52
PTPN11-201ENST00000351677 NOP2P46087 812 aaKnown RBP18.32■□□□□ 0.52
PTPN11-201ENST00000351677 IFFO1Q0D2I5 559 aa18.32■□□□□ 0.52
PTPN11-201ENST00000351677 KLHDC4Q8TBB5 520 aa18.32■□□□□ 0.52
PTPN11-201ENST00000351677 DCAF5Q96JK2 942 aa18.32■□□□□ 0.52
PTPN11-201ENST00000351677 NPC1L1Q9UHC9 1359 aa18.32■□□□□ 0.52
PTPN11-201ENST00000351677 SHTN1A0MZ66 631 aa18.31■□□□□ 0.52
PTPN11-201ENST00000351677 ZRSR2Q15696 482 aaKnown RBP18.31■□□□□ 0.52
PTPN11-201ENST00000351677 DYDC1Q8WWB3 177 aa18.31■□□□□ 0.52
PTPN11-201ENST00000351677 CTNNBL1Q8WYA6 563 aaPredicted RBP18.31■□□□□ 0.52
PTPN11-201ENST00000351677 EHMT1Q9H9B1 1298 aa18.31■□□□□ 0.52
PTPN11-201ENST00000351677 MACROD2A1Z1Q3 448 aa18.31■□□□□ 0.52
PTPN11-201ENST00000351677 DESP17661 470 aa18.31■□□□□ 0.52
PTPN11-201ENST00000351677 SCLT1Q96NL6 688 aa18.31■□□□□ 0.52
PTPN11-201ENST00000351677 NLRP3Q96P20 1036 aa18.31■□□□□ 0.52
PTPN11-201ENST00000351677 DNAI1Q9UI46 699 aa18.31■□□□□ 0.52
PTPN11-201ENST00000351677 TRPM2O94759 1503 aa18.31■□□□□ 0.52
PTPN11-201ENST00000351677 DISP1Q96F81 1524 aa18.31■□□□□ 0.52
PTPN11-201ENST00000351677 HLTFQ14527 1009 aaKnown RBP eCLIP18.31■□□□□ 0.52
PTPN11-201ENST00000351677 ZMYM3Q14202 1370 aa18.31■□□□□ 0.52
PTPN11-201ENST00000351677 DDX21Q9NR30 783 aaKnown RBP eCLIP18.31■□□□□ 0.52
PTPN11-201ENST00000351677 PPP4R3AQ6IN85 833 aa18.31■□□□□ 0.52
PTPN11-201ENST00000351677 CABP5Q9NP86 173 aa18.31■□□□□ 0.52
PTPN11-201ENST00000351677 ST5P78524 1137 aa18.3■□□□□ 0.52
PTPN11-201ENST00000351677 MMRN2Q9H8L6 949 aa18.3■□□□□ 0.52
PTPN11-201ENST00000351677 RNF216Q9NWF9 866 aaPredicted RBP18.3■□□□□ 0.52
PTPN11-201ENST00000351677 BMP15O95972 392 aa18.3■□□□□ 0.52
PTPN11-201ENST00000351677 TIMM10P62072 90 aa18.3■□□□□ 0.52
PTPN11-201ENST00000351677 PICALMQ13492 652 aa18.3■□□□□ 0.52
PTPN11-201ENST00000351677 PRPF4BQ13523 1007 aaKnown RBP18.3■□□□□ 0.52
PTPN11-201ENST00000351677 WDR78Q5VTH9 848 aa18.3■□□□□ 0.52
PTPN11-201ENST00000351677 SAMM50Q9Y512 469 aa18.3■□□□□ 0.52
PTPN11-201ENST00000351677 SYCP3Q8IZU3 236 aa18.29■□□□□ 0.52
PTPN11-201ENST00000351677 ADGRL2O95490 1459 aa18.29■□□□□ 0.52
PTPN11-201ENST00000351677 LGR6Q9HBX8 967 aa18.29■□□□□ 0.52
PTPN11-201ENST00000351677 PTGS1P23219 599 aa18.29■□□□□ 0.52
PTPN11-201ENST00000351677 RAD50Q92878 1312 aa18.29■□□□□ 0.52
PTPN11-201ENST00000351677 TRIM75PA6NK02 468 aa18.29■□□□□ 0.52
PTPN11-201ENST00000351677 POTEB2H3BUK9 544 aa18.29■□□□□ 0.52
PTPN11-201ENST00000351677 CHL1O00533 1208 aa18.29■□□□□ 0.52
PTPN11-201ENST00000351677 EDC4Q6P2E9 1401 aaKnown RBP18.29■□□□□ 0.52
PTPN11-201ENST00000351677 GSTTP1A0A1W2PQM5 241 aa18.29■□□□□ 0.52
PTPN11-201ENST00000351677 AKR1B10O60218 316 aa18.29■□□□□ 0.52
PTPN11-201ENST00000351677 PNMA6EA0A0J9YXQ4 647 aa18.28■□□□□ 0.52
PTPN11-201ENST00000351677 EIF4G3O43432 1585 aaKnown RBP18.28■□□□□ 0.52
PTPN11-201ENST00000351677 DTNBO60941 627 aa18.28■□□□□ 0.52
PTPN11-201ENST00000351677 GTF2F1P35269 517 aaKnown RBP eCLIP18.28■□□□□ 0.52
PTPN11-201ENST00000351677 DDB1Q16531 1140 aa18.28■□□□□ 0.52
PTPN11-201ENST00000351677 TRERF1Q96PN7 1200 aa18.28■□□□□ 0.52
PTPN11-201ENST00000351677 ZKSCAN3Q9BRR0 538 aa18.28■□□□□ 0.52
PTPN11-201ENST00000351677 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.28■□□□□ 0.522e-7■□□□□ 10.1
PTPN11-201ENST00000351677 USP19O94966 1318 aa18.28■□□□□ 0.52
PTPN11-201ENST00000351677 NAPAP54920 295 aa18.28■□□□□ 0.52
PTPN11-201ENST00000351677 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
PTPN11-201ENST00000351677 CTAGE1Q96RT6 745 aa18.28■□□□□ 0.52
PTPN11-201ENST00000351677 CETN1Q12798 172 aa18.27■□□□□ 0.52
PTPN11-201ENST00000351677 JAG2Q9Y219 1238 aa18.27■□□□□ 0.52
PTPN11-201ENST00000351677 BLMP54132 1417 aaPredicted RBP18.27■□□□□ 0.52
PTPN11-201ENST00000351677 C19orf44Q9H6X5 657 aa18.27■□□□□ 0.52
PTPN11-201ENST00000351677 ZNF790Q6PG37 636 aa18.27■□□□□ 0.52
PTPN11-201ENST00000351677 FAM89AQ96GI7 184 aa18.27■□□□□ 0.52
PTPN11-201ENST00000351677 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.27■□□□□ 0.52
PTPN11-201ENST00000351677 SNX14Q9Y5W7 946 aa18.27■□□□□ 0.52
PTPN11-201ENST00000351677 V9GYY5 206 aaPredicted RBP18.27■□□□□ 0.52
PTPN11-201ENST00000351677 KIF21AQ7Z4S6 1674 aa18.27■□□□□ 0.51
PTPN11-201ENST00000351677 SLC27A2O14975 620 aa18.27■□□□□ 0.51
PTPN11-201ENST00000351677 RPS6KB1P23443 525 aa18.27■□□□□ 0.51
PTPN11-201ENST00000351677 STX17P56962 302 aa18.27■□□□□ 0.51
PTPN11-201ENST00000351677 CTR9Q6PD62 1173 aa18.27■□□□□ 0.51
PTPN11-201ENST00000351677 SMARCC1Q92922 1105 aaPredicted RBP18.27■□□□□ 0.51
PTPN11-201ENST00000351677 FAM227BQ96M60 508 aa18.26■□□□□ 0.51
PTPN11-201ENST00000351677 NAA15Q9BXJ9 866 aaKnown RBP18.26■□□□□ 0.51
PTPN11-201ENST00000351677 LRRC27Q9C0I9 530 aa18.26■□□□□ 0.51
PTPN11-201ENST00000351677 ASIC1P78348 528 aa18.26■□□□□ 0.51
PTPN11-201ENST00000351677 SBNO1A3KN83 1393 aa18.26■□□□□ 0.51
PTPN11-201ENST00000351677 BMS1Q14692 1282 aaKnown RBP18.26■□□□□ 0.51
PTPN11-201ENST00000351677 KAT6BQ8WYB5 2073 aa18.26■□□□□ 0.51
PTPN11-201ENST00000351677 TBCAO75347 108 aaKnown RBP18.26■□□□□ 0.51
PTPN11-201ENST00000351677 NEBLO76041 1014 aa18.26■□□□□ 0.51
PTPN11-201ENST00000351677 GNAT2P19087 354 aa18.26■□□□□ 0.51
PTPN11-201ENST00000351677 SPECC1Q5M775 1068 aa18.26■□□□□ 0.51
PTPN11-201ENST00000351677 DRC1Q96MC2 740 aa18.26■□□□□ 0.51
PTPN11-201ENST00000351677 MCM9Q9NXL9 1143 aa18.26■□□□□ 0.51
PTPN11-201ENST00000351677 MAP2K1Q02750 393 aaPredicted RBP18.26■□□□□ 0.51
PTPN11-201ENST00000351677 TNNI3KQ59H18 835 aa18.26■□□□□ 0.51
PTPN11-201ENST00000351677 DBNDD2Q9BQY9 259 aa18.26■□□□□ 0.51
PTPN11-201ENST00000351677 FPGT-TNNI3KV9GXZ4 949 aa18.26■□□□□ 0.51
PTPN11-201ENST00000351677 GNAQP50148 359 aa18.25■□□□□ 0.51
PTPN11-201ENST00000351677 A0A1B0GUL7 405 aa18.25■□□□□ 0.51
PTPN11-201ENST00000351677 A0A1B0GVL5 298 aa18.25■□□□□ 0.51
PTPN11-201ENST00000351677 KRT2P35908 639 aa18.25■□□□□ 0.51
PTPN11-201ENST00000351677 IFNKQ9P0W0 207 aa18.25■□□□□ 0.51
PTPN11-201ENST00000351677 RBSNQ9H1K0 784 aa18.25■□□□□ 0.51
PTPN11-201ENST00000351677 HELLSQ9NRZ9 838 aa18.25■□□□□ 0.51
PTPN11-201ENST00000351677 ABCC2Q92887 1545 aa18.25■□□□□ 0.51
PTPN11-201ENST00000351677 MCM7P33993 719 aa18.25■□□□□ 0.51
PTPN11-201ENST00000351677 METTL22Q9BUU2 404 aaPredicted RBP18.24■□□□□ 0.51
PTPN11-201ENST00000351677 ATP7AQ04656 1500 aa18.24■□□□□ 0.51
PTPN11-201ENST00000351677 PTPRTO14522 1441 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms