RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 TFIP11Q9UBB9 837 aaKnown RBP26.11■■□□□ 1.77
UPF3A-201ENST00000351487 DISP2A7MBM2 1401 aa26.11■■□□□ 1.77
UPF3A-201ENST00000351487 H3BQV1 296 aa26.11■■□□□ 1.77
UPF3A-201ENST00000351487 IFFO2Q5TF58 517 aa26.11■■□□□ 1.77
UPF3A-201ENST00000351487 NAA16Q6N069 864 aaPredicted RBP26.11■■□□□ 1.77
UPF3A-201ENST00000351487 GIGYF2Q6Y7W6 1299 aaKnown RBP26.11■■□□□ 1.77
UPF3A-201ENST00000351487 OSBP2Q969R2 916 aa26.11■■□□□ 1.77
UPF3A-201ENST00000351487 DDX60Q8IY21 1712 aaKnown RBP26.1■■□□□ 1.77
UPF3A-201ENST00000351487 ADORA1P30542 326 aa26.1■■□□□ 1.77
UPF3A-201ENST00000351487 RBM43Q6ZSC3 357 aaKnown RBP26.1■■□□□ 1.77
UPF3A-201ENST00000351487 FAM89AQ96GI7 184 aa26.1■■□□□ 1.77
UPF3A-201ENST00000351487 ZNF330Q9Y3S2 320 aaPredicted RBP26.1■■□□□ 1.77
UPF3A-201ENST00000351487 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.1■■□□□ 1.77
UPF3A-201ENST00000351487 SALL1Q9NSC2 1324 aa26.1■■□□□ 1.77
UPF3A-201ENST00000351487 PLCH1Q4KWH8 1693 aa26.1■■□□□ 1.77
UPF3A-201ENST00000351487 GOLGA6L4A6NEF3 574 aa26.1■■□□□ 1.77
UPF3A-201ENST00000351487 CTDNEP1O95476 244 aa26.1■■□□□ 1.77
UPF3A-201ENST00000351487 IFIT5Q13325 482 aaKnown RBP26.1■■□□□ 1.77
UPF3A-201ENST00000351487 KIF3AQ9Y496 699 aa26.1■■□□□ 1.77
UPF3A-201ENST00000351487 A0A0G2JLW4 131 aa26.09■■□□□ 1.77
UPF3A-201ENST00000351487 FKBP4Q02790 459 aaKnown RBP eCLIP26.09■■□□□ 1.77
UPF3A-201ENST00000351487 APOBRQ0VD83 1088 aa26.09■■□□□ 1.77
UPF3A-201ENST00000351487 DDX11Q96FC9 970 aa26.09■■□□□ 1.77
UPF3A-201ENST00000351487 AKAP11Q9UKA4 1901 aa26.09■■□□□ 1.77
UPF3A-201ENST00000351487 GORABQ5T7V8 394 aa26.08■■□□□ 1.77
UPF3A-201ENST00000351487 ZNF274Q96GC6 653 aaPredicted RBP26.08■■□□□ 1.77
UPF3A-201ENST00000351487 DACT1Q9NYF0 836 aa26.08■■□□□ 1.77
UPF3A-201ENST00000351487 CHMP4CQ96CF2 233 aa26.08■■□□□ 1.77
UPF3A-201ENST00000351487 CFAP45Q9UL16 551 aa26.08■■□□□ 1.77
UPF3A-201ENST00000351487 PTPDC1A2A3K4 754 aa26.07■■□□□ 1.76
UPF3A-201ENST00000351487 EVCP57679 992 aa26.07■■□□□ 1.76
UPF3A-201ENST00000351487 TAF7LQ5H9L4 462 aa26.07■■□□□ 1.76
UPF3A-201ENST00000351487 PGBD1Q96JS3 809 aa26.07■■□□□ 1.76
UPF3A-201ENST00000351487 CTNNA3Q9UI47 895 aa26.07■■□□□ 1.76
UPF3A-201ENST00000351487 BCL9O00512 1426 aa26.07■■□□□ 1.76
UPF3A-201ENST00000351487 COL14A1Q05707 1796 aaKnown RBP26.07■■□□□ 1.76
UPF3A-201ENST00000351487 FOXP2O15409 715 aa26.07■■□□□ 1.76
UPF3A-201ENST00000351487 HSP90AB3PQ58FF7 597 aa26.07■■□□□ 1.76
UPF3A-201ENST00000351487 FAM200AQ8TCP9 573 aa26.07■■□□□ 1.76
UPF3A-201ENST00000351487 TNMDQ9H2S6 317 aa26.06■■□□□ 1.76
UPF3A-201ENST00000351487 CLSTN2Q9H4D0 955 aa26.06■■□□□ 1.76
UPF3A-201ENST00000351487 NUP98P52948 1817 aa26.06■■□□□ 1.76
UPF3A-201ENST00000351487 NLRP10Q86W26 655 aa26.06■■□□□ 1.76
UPF3A-201ENST00000351487 APPBP2Q92624 585 aa26.06■■□□□ 1.76
UPF3A-201ENST00000351487 RIPOR2Q9Y4F9 1068 aa26.06■■□□□ 1.76
UPF3A-201ENST00000351487 PDIA3P30101 505 aaKnown RBP26.05■■□□□ 1.76
UPF3A-201ENST00000351487 TYRO3Q06418 890 aa26.05■■□□□ 1.76
UPF3A-201ENST00000351487 KIAA2012Q0VF49 1180 aa26.05■■□□□ 1.76
UPF3A-201ENST00000351487 SCARF1Q14162 830 aa26.05■■□□□ 1.76
UPF3A-201ENST00000351487 MRVI1Q9Y6F6 885 aa26.05■■□□□ 1.76
UPF3A-201ENST00000351487 TTLL5Q6EMB2 1281 aa26.04■■□□□ 1.76
UPF3A-201ENST00000351487 ADD1P35611 737 aaKnown RBP26.04■■□□□ 1.76
UPF3A-201ENST00000351487 CCDC85AQ96PX6 553 aaPredicted RBP26.04■■□□□ 1.76
UPF3A-201ENST00000351487 WNK3Q9BYP7 1800 aa26.03■■□□□ 1.76
UPF3A-201ENST00000351487 ZAP70P43403 619 aa26.03■■□□□ 1.76
UPF3A-201ENST00000351487 HLFQ16534 295 aa26.03■■□□□ 1.76
UPF3A-201ENST00000351487 CAMK4Q16566 473 aa26.03■■□□□ 1.76
UPF3A-201ENST00000351487 ATP2B3Q16720 1220 aa26.03■■□□□ 1.76
UPF3A-201ENST00000351487 TTLL11Q8NHH1 800 aa26.03■■□□□ 1.76
UPF3A-201ENST00000351487 BTG4Q9NY30 223 aa26.03■■□□□ 1.76
UPF3A-201ENST00000351487 IMMTQ16891 758 aaKnown RBP26.03■■□□□ 1.76
UPF3A-201ENST00000351487 ATL3Q6DD88 541 aa26.03■■□□□ 1.76
UPF3A-201ENST00000351487 ZNF512BQ96KM6 892 aaPredicted RBP26.03■■□□□ 1.76
UPF3A-201ENST00000351487 LRP5O75197 1615 aa26.02■■□□□ 1.76
UPF3A-201ENST00000351487 AP5Z1O43299 807 aa26.02■■□□□ 1.76
UPF3A-201ENST00000351487 CYP19A1P11511 503 aaPredicted RBP26.02■■□□□ 1.76
UPF3A-201ENST00000351487 WASHC4Q2M389 1173 aa26.02■■□□□ 1.76
UPF3A-201ENST00000351487 BICD2Q8TD16 824 aa26.02■■□□□ 1.76
UPF3A-201ENST00000351487 NR1I2O75469 434 aa26.02■■□□□ 1.76
UPF3A-201ENST00000351487 ITGA6P23229 1130 aa26.02■■□□□ 1.76
UPF3A-201ENST00000351487 CTSWP56202 376 aa26.02■■□□□ 1.76
UPF3A-201ENST00000351487 CCT2P78371 535 aaKnown RBP26.02■■□□□ 1.76
UPF3A-201ENST00000351487 ATRNO75882 1429 aa26.02■■□□□ 1.76
UPF3A-201ENST00000351487 METTL24Q5JXM2 366 aa26.01■■□□□ 1.75
UPF3A-201ENST00000351487 SLC4A9Q96Q91 983 aa26.01■■□□□ 1.75
UPF3A-201ENST00000351487 GREM2Q9H772 168 aa26.01■■□□□ 1.75
UPF3A-201ENST00000351487 NCOA5Q9HCD5 579 aaKnown RBP26.01■■□□□ 1.75
UPF3A-201ENST00000351487 SYNE4Q8N205 404 aa26■■□□□ 1.75
UPF3A-201ENST00000351487 RCOR1Q9UKL0 485 aa26■■□□□ 1.75
UPF3A-201ENST00000351487 CARMIL3Q8ND23 1372 aa26■■□□□ 1.75
UPF3A-201ENST00000351487 FGAP02671 866 aa26■■□□□ 1.75
UPF3A-201ENST00000351487 LDHAL6AQ6ZMR3 332 aa26■■□□□ 1.75
UPF3A-201ENST00000351487 VGLL2Q8N8G2 317 aa26■■□□□ 1.75
UPF3A-201ENST00000351487 ARAP2Q8WZ64 1704 aa26■■□□□ 1.75
UPF3A-201ENST00000351487 ANKRD18BA2A2Z9 1011 aa25.99■■□□□ 1.75
UPF3A-201ENST00000351487 GPTP24298 496 aa25.99■■□□□ 1.75
UPF3A-201ENST00000351487 CHST3Q7LGC8 479 aa25.99■■□□□ 1.75
UPF3A-201ENST00000351487 CKAP2LQ8IYA6 745 aa25.99■■□□□ 1.75
UPF3A-201ENST00000351487 PIBF1Q8WXW3 757 aa25.99■■□□□ 1.75
UPF3A-201ENST00000351487 PUS7LQ9H0K6 701 aaKnown RBP25.99■■□□□ 1.75
UPF3A-201ENST00000351487 MCAMP43121 646 aa25.99■■□□□ 1.75
UPF3A-201ENST00000351487 MB21D2Q8IYB1 491 aaPredicted RBP25.99■■□□□ 1.75
UPF3A-201ENST00000351487 R3HCC1Q9Y3T6 440 aaKnown RBP25.99■■□□□ 1.75
UPF3A-201ENST00000351487 WDR19Q8NEZ3 1342 aa25.98■■□□□ 1.75
UPF3A-201ENST00000351487 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.98■■□□□ 1.75
UPF3A-201ENST00000351487 PI16Q6UXB8 463 aa25.98■■□□□ 1.75
UPF3A-201ENST00000351487 GPAA1O43292 621 aa25.97■■□□□ 1.75
UPF3A-201ENST00000351487 ZBTB1Q9Y2K1 713 aa25.97■■□□□ 1.75
UPF3A-201ENST00000351487 MYO5AQ9Y4I1 1855 aaKnown RBP25.97■■□□□ 1.75
UPF3A-201ENST00000351487 ERVV-1B6SEH8 477 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms