RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 MYH14Q7Z406 1995 aaKnown RBP19.85■□□□□ 0.77
SAMM50-201ENST00000350028 ONECUT3O60422 494 aaPredicted RBP19.85■□□□□ 0.77
SAMM50-201ENST00000350028 CAVIN1Q6NZI2 390 aaKnown RBP19.85■□□□□ 0.77
SAMM50-201ENST00000350028 GAS2L3Q86XJ1 694 aa19.85■□□□□ 0.77
SAMM50-201ENST00000350028 NECAB1Q8N987 351 aa19.85■□□□□ 0.77
SAMM50-201ENST00000350028 CHAMP1Q96JM3 812 aa19.85■□□□□ 0.77
SAMM50-201ENST00000350028 EP400Q96L91 3159 aa19.85■□□□□ 0.77
SAMM50-201ENST00000350028 F13A1P00488 732 aa19.85■□□□□ 0.77
SAMM50-201ENST00000350028 COL9A3Q14050 684 aaPredicted RBP19.85■□□□□ 0.77
SAMM50-201ENST00000350028 SCARF1Q14162 830 aa19.85■□□□□ 0.77
SAMM50-201ENST00000350028 SLFNL1Q499Z3 407 aa19.85■□□□□ 0.77
SAMM50-201ENST00000350028 ZSCAN25Q6NSZ9 544 aa19.85■□□□□ 0.77
SAMM50-201ENST00000350028 ILDR1Q86SU0 546 aaPredicted RBP19.85■□□□□ 0.77
SAMM50-201ENST00000350028 ZNF652Q9Y2D9 606 aa19.85■□□□□ 0.77
SAMM50-201ENST00000350028 COL5A3P25940 1745 aaPredicted RBP19.84■□□□□ 0.77
SAMM50-201ENST00000350028 M0R2C6 588 aa19.84■□□□□ 0.77
SAMM50-201ENST00000350028 KCNQ2O43526 872 aa19.84■□□□□ 0.77
SAMM50-201ENST00000350028 UQCRFS1P1P0C7P4 283 aa19.84■□□□□ 0.77
SAMM50-201ENST00000350028 TTF1Q15361 905 aaPredicted RBP19.84■□□□□ 0.77
SAMM50-201ENST00000350028 TMEM87AQ8NBN3 555 aa19.84■□□□□ 0.77
SAMM50-201ENST00000350028 APPBP2Q92624 585 aa19.84■□□□□ 0.77
SAMM50-201ENST00000350028 OSBP2Q969R2 916 aa19.84■□□□□ 0.77
SAMM50-201ENST00000350028 TCEANC2Q96MN5 208 aa19.84■□□□□ 0.77
SAMM50-201ENST00000350028 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.84■□□□□ 0.773e-6■■□□□ 14.5
SAMM50-201ENST00000350028 CTNNA3Q9UI47 895 aa19.84■□□□□ 0.77
SAMM50-201ENST00000350028 PDCP20941 246 aa19.83■□□□□ 0.77
SAMM50-201ENST00000350028 PUM3Q15397 648 aaKnown RBP19.83■□□□□ 0.77
SAMM50-201ENST00000350028 LPIN2Q92539 896 aa19.83■□□□□ 0.77
SAMM50-201ENST00000350028 MTMR6Q9Y217 621 aa19.83■□□□□ 0.77
SAMM50-201ENST00000350028 RTL9Q8NET4 1388 aa19.83■□□□□ 0.76
SAMM50-201ENST00000350028 HCLS1P14317 486 aaPredicted RBP19.82■□□□□ 0.76
SAMM50-201ENST00000350028 WASHC4Q2M389 1173 aa19.82■□□□□ 0.76
SAMM50-201ENST00000350028 ZSCAN23Q3MJ62 389 aa19.82■□□□□ 0.76
SAMM50-201ENST00000350028 CCDC152Q4G0S7 254 aa19.82■□□□□ 0.76
SAMM50-201ENST00000350028 CLEC4GQ6UXB4 293 aa19.82■□□□□ 0.76
SAMM50-201ENST00000350028 Q6ZUG5 572 aa19.82■□□□□ 0.76
SAMM50-201ENST00000350028 DHX32Q7L7V1 743 aaKnown RBP19.82■□□□□ 0.76
SAMM50-201ENST00000350028 NIP7Q9Y221 180 aaKnown RBP eCLIP19.82■□□□□ 0.76
SAMM50-201ENST00000350028 MYH7P12883 1935 aa19.82■□□□□ 0.76
SAMM50-201ENST00000350028 AKAP11Q9UKA4 1901 aa19.82■□□□□ 0.76
SAMM50-201ENST00000350028 RGL2O15211 777 aa19.82■□□□□ 0.76
SAMM50-201ENST00000350028 NTSR2O95665 410 aa19.82■□□□□ 0.76
SAMM50-201ENST00000350028 FGFR2P21802 821 aa19.82■□□□□ 0.76
SAMM50-201ENST00000350028 MCAMP43121 646 aa19.82■□□□□ 0.76
SAMM50-201ENST00000350028 STOX1Q6ZVD7 989 aa19.82■□□□□ 0.76
SAMM50-201ENST00000350028 LAMB2P55268 1798 aa19.81■□□□□ 0.76
SAMM50-201ENST00000350028 LAMA4Q16363 1823 aa19.81■□□□□ 0.76
SAMM50-201ENST00000350028 DDX60Q8IY21 1712 aaKnown RBP19.81■□□□□ 0.76
SAMM50-201ENST00000350028 ARAP2Q8WZ64 1704 aa19.81■□□□□ 0.76
SAMM50-201ENST00000350028 BCORQ6W2J9 1755 aa19.81■□□□□ 0.76
SAMM50-201ENST00000350028 ARID4AP29374 1257 aaPredicted RBP19.81■□□□□ 0.76
SAMM50-201ENST00000350028 FAM177BA6PVY3 158 aa19.8■□□□□ 0.76
SAMM50-201ENST00000350028 SLC5A1P13866 664 aa19.8■□□□□ 0.76
SAMM50-201ENST00000350028 LARP1BQ659C4 914 aaKnown RBP19.8■□□□□ 0.76
SAMM50-201ENST00000350028 USP48Q86UV5 1035 aa19.8■□□□□ 0.76
SAMM50-201ENST00000350028 MPHOSPH8Q99549 860 aa19.8■□□□□ 0.76
SAMM50-201ENST00000350028 E7EWF7 191 aa19.79■□□□□ 0.76
SAMM50-201ENST00000350028 EXOSC10Q01780 885 aaKnown RBP19.79■□□□□ 0.76
SAMM50-201ENST00000350028 CSPP1Q1MSJ5 1256 aa19.79■□□□□ 0.76
SAMM50-201ENST00000350028 CCDC102BQ68D86 513 aa19.79■□□□□ 0.76
SAMM50-201ENST00000350028 ZNF772Q68DY9 489 aaPredicted RBP19.79■□□□□ 0.76
SAMM50-201ENST00000350028 GTF3C6Q969F1 213 aa19.79■□□□□ 0.76
SAMM50-201ENST00000350028 SYAP1Q96A49 352 aaPredicted RBP19.79■□□□□ 0.76
SAMM50-201ENST00000350028 BRWD3Q6RI45 1802 aa19.79■□□□□ 0.76
SAMM50-201ENST00000350028 CNTNAP4Q9C0A0 1308 aa19.79■□□□□ 0.76
SAMM50-201ENST00000350028 ADD2P35612 726 aa19.79■□□□□ 0.76
SAMM50-201ENST00000350028 IGHMBP2P38935 993 aaKnown RBP19.78■□□□□ 0.76
SAMM50-201ENST00000350028 FGD1P98174 961 aa19.78■□□□□ 0.76
SAMM50-201ENST00000350028 FOXD4L6Q3SYB3 417 aaPredicted RBP19.78■□□□□ 0.76
SAMM50-201ENST00000350028 POTEAQ6S8J7 498 aa19.78■□□□□ 0.76
SAMM50-201ENST00000350028 PI16Q6UXB8 463 aa19.78■□□□□ 0.76
SAMM50-201ENST00000350028 FOXD4L3Q6VB84 417 aaPredicted RBP19.78■□□□□ 0.76
SAMM50-201ENST00000350028 SEPT12Q8IYM1 358 aa19.78■□□□□ 0.76
SAMM50-201ENST00000350028 LINC00116Q8NCU8 138 aa19.78■□□□□ 0.76
SAMM50-201ENST00000350028 AGXT2Q9BYV1 514 aa19.78■□□□□ 0.76
SAMM50-201ENST00000350028 PANK2Q9BZ23 570 aa19.78■□□□□ 0.76
SAMM50-201ENST00000350028 TMEM63CQ9P1W3 806 aa19.78■□□□□ 0.76
SAMM50-201ENST00000350028 RBM27Q9P2N5 1060 aaKnown RBP19.78■□□□□ 0.76
SAMM50-201ENST00000350028 TCHHQ07283 1943 aa19.78■□□□□ 0.76
SAMM50-201ENST00000350028 VPS37CA5D8V6 355 aaPredicted RBP19.77■□□□□ 0.76
SAMM50-201ENST00000350028 PHKA1P46020 1223 aa19.77■□□□□ 0.76
SAMM50-201ENST00000350028 STK3Q13188 491 aa19.77■□□□□ 0.76
SAMM50-201ENST00000350028 UBE3CQ15386 1083 aa19.77■□□□□ 0.76
SAMM50-201ENST00000350028 IMMTQ16891 758 aaKnown RBP19.77■□□□□ 0.76
SAMM50-201ENST00000350028 FAM182BQ5T319 152 aa19.77■□□□□ 0.76
SAMM50-201ENST00000350028 BRF1Q92994 677 aa19.77■□□□□ 0.76
SAMM50-201ENST00000350028 CHMP4CQ96CF2 233 aa19.77■□□□□ 0.76
SAMM50-201ENST00000350028 SEC31BQ9NQW1 1179 aa19.77■□□□□ 0.76
SAMM50-201ENST00000350028 NSFL1CQ9UNZ2 370 aaKnown RBP19.77■□□□□ 0.76
SAMM50-201ENST00000350028 CNPY2Q9Y2B0 182 aa19.77■□□□□ 0.76
SAMM50-201ENST00000350028 RC3H1Q5TC82 1133 aaKnown RBP19.76■□□□□ 0.75
SAMM50-201ENST00000350028 HELBQ8NG08 1087 aaPredicted RBP19.76■□□□□ 0.75
SAMM50-201ENST00000350028 LLPHQ9BRT6 129 aaKnown RBP19.76■□□□□ 0.75
SAMM50-201ENST00000350028 PUS7LQ9H0K6 701 aaKnown RBP19.76■□□□□ 0.75
SAMM50-201ENST00000350028 PFKFB2O60825 505 aa19.76■□□□□ 0.75
SAMM50-201ENST00000350028 FBXL16Q8N461 479 aa19.76■□□□□ 0.75
SAMM50-201ENST00000350028 GDPD2Q9HCC8 539 aa19.76■□□□□ 0.75
SAMM50-201ENST00000350028 PIH1D3Q9NQM4 214 aaKnown RBP19.76■□□□□ 0.75
SAMM50-201ENST00000350028 GPAA1O43292 621 aa19.75■□□□□ 0.75
SAMM50-201ENST00000350028 RBM6P78332 1123 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms