RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 HDXQ7Z353 690 aa12.3□□□□□ -0.44
CAPN3-203ENST00000349748 AOPEPQ8N6M6 819 aa12.3□□□□□ -0.44
CAPN3-203ENST00000349748 ANKRD44Q8N8A2 993 aa12.3□□□□□ -0.44
CAPN3-203ENST00000349748 RABGGTAQ92696 567 aa12.3□□□□□ -0.44
CAPN3-203ENST00000349748 ZKSCAN4Q969J2 545 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-203ENST00000349748 ITFG2Q969R8 447 aa12.3□□□□□ -0.44
CAPN3-203ENST00000349748 SPATA32Q96LK8 384 aa12.3□□□□□ -0.44
CAPN3-203ENST00000349748 TRIM6Q9C030 488 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-203ENST00000349748 PLEKHG1Q9ULL1 1385 aa12.3□□□□□ -0.44
CAPN3-203ENST00000349748 GCFC2P16383 781 aaKnown RBP12.3□□□□□ -0.44
CAPN3-203ENST00000349748 TXLNAP40222 546 aa12.3□□□□□ -0.44
CAPN3-203ENST00000349748 IRX1P78414 480 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-203ENST00000349748 ZNF513Q8N8E2 541 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-203ENST00000349748 STAG1Q8WVM7 1258 aa12.3□□□□□ -0.44
CAPN3-203ENST00000349748 THOC1Q96FV9 657 aaKnown RBP12.3□□□□□ -0.44
CAPN3-203ENST00000349748 THUMPD2Q9BTF0 503 aaKnown RBP12.3□□□□□ -0.44
CAPN3-203ENST00000349748 KCNA6P17658 529 aa12.3□□□□□ -0.44
CAPN3-203ENST00000349748 HSP90B2PQ58FF3 399 aa12.3□□□□□ -0.44
CAPN3-203ENST00000349748 CEP85Q6P2H3 762 aa12.3□□□□□ -0.44
CAPN3-203ENST00000349748 KCNB2Q92953 911 aa12.3□□□□□ -0.44
CAPN3-203ENST00000349748 TERF2IPQ9NYB0 399 aa12.3□□□□□ -0.44
CAPN3-203ENST00000349748 LMTK3Q96Q04 1460 aa12.3□□□□□ -0.44
CAPN3-203ENST00000349748 ADAMTS13Q76LX8 1427 aa12.29□□□□□ -0.44
CAPN3-203ENST00000349748 NSD2O96028 1365 aa12.29□□□□□ -0.44
CAPN3-203ENST00000349748 ARID4AP29374 1257 aaPredicted RBP12.29□□□□□ -0.44
CAPN3-203ENST00000349748 ARMC3Q5W041 872 aa12.29□□□□□ -0.44
CAPN3-203ENST00000349748 NECAB1Q8N987 351 aa12.29□□□□□ -0.44
CAPN3-203ENST00000349748 GOLGA1Q92805 767 aa12.29□□□□□ -0.44
CAPN3-203ENST00000349748 PGBD1Q96JS3 809 aa12.29□□□□□ -0.44
CAPN3-203ENST00000349748 TTC14Q96N46 770 aa12.29□□□□□ -0.44
CAPN3-203ENST00000349748 ABCB6Q9NP58 842 aa12.29□□□□□ -0.44
CAPN3-203ENST00000349748 TBX22Q9Y458 520 aa12.29□□□□□ -0.44
CAPN3-203ENST00000349748 CAPN7Q9Y6W3 813 aa12.29□□□□□ -0.44
CAPN3-203ENST00000349748 EIF3JO75822 258 aaKnown RBP12.29□□□□□ -0.44
CAPN3-203ENST00000349748 GOLGA8FQ08AF8 430 aa12.29□□□□□ -0.44
CAPN3-203ENST00000349748 GOLGA8DPQ0D2H9 430 aa12.29□□□□□ -0.44
CAPN3-203ENST00000349748 RASEFQ8IZ41 740 aa12.29□□□□□ -0.44
CAPN3-203ENST00000349748 ARHGAP45Q92619 1136 aa12.29□□□□□ -0.44
CAPN3-203ENST00000349748 TATDN2Q93075 761 aa12.29□□□□□ -0.44
CAPN3-203ENST00000349748 PNKPQ96T60 521 aa12.29□□□□□ -0.44
CAPN3-203ENST00000349748 XPO4Q9C0E2 1151 aaKnown RBP12.29□□□□□ -0.44
CAPN3-203ENST00000349748 ODF2LQ9ULJ1 636 aa12.29□□□□□ -0.44
CAPN3-203ENST00000349748 IL16Q14005 1332 aa12.29□□□□□ -0.44
CAPN3-203ENST00000349748 AP1G2O75843 785 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 GNG11P61952 73 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 MAP3K9P80192 1104 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 BRD3Q15059 726 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 UNC5CLQ8IV45 518 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 ZNF483Q8TF39 744 aaPredicted RBP12.28□□□□□ -0.44
CAPN3-203ENST00000349748 LEO1Q8WVC0 666 aaPredicted RBP12.28□□□□□ -0.44
CAPN3-203ENST00000349748 CABS1Q96KC9 395 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 CDK19Q9BWU1 502 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 FAM107BQ9H098 131 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 PTCH1Q13635 1447 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 KNDC1Q76NI1 1749 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 TTC36A6NLP5 189 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 INPP5BP32019 993 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 RDXP35241 583 aaKnown RBP12.28□□□□□ -0.44
CAPN3-203ENST00000349748 JAKMIP3Q5VZ66 844 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 FMNL3Q8IVF7 1028 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 CCDC150Q8NCX0 1101 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 DDX54Q8TDD1 881 aaKnown RBP12.28□□□□□ -0.44
CAPN3-203ENST00000349748 UTP14AQ9BVJ6 771 aaKnown RBP12.28□□□□□ -0.44
CAPN3-203ENST00000349748 A1CFQ9NQ94 594 aaKnown RBP12.28□□□□□ -0.44
CAPN3-203ENST00000349748 IFNKQ9P0W0 207 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 MRFAP1Q9Y605 127 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 NPHP3Q7Z494 1330 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 TTC21AQ8NDW8 1320 aa12.28□□□□□ -0.44
CAPN3-203ENST00000349748 TUBB4AP04350 444 aa12.27□□□□□ -0.44
CAPN3-203ENST00000349748 HSPA4P34932 840 aa12.27□□□□□ -0.44
CAPN3-203ENST00000349748 STX1AQ16623 288 aa12.27□□□□□ -0.44
CAPN3-203ENST00000349748 LARP1BQ659C4 914 aaKnown RBP12.27□□□□□ -0.44
CAPN3-203ENST00000349748 DHX58Q96C10 678 aa12.27□□□□□ -0.44
CAPN3-203ENST00000349748 EHD4Q9H223 541 aa12.27□□□□□ -0.44
CAPN3-203ENST00000349748 ETAA1Q9NY74 926 aa12.27□□□□□ -0.44
CAPN3-203ENST00000349748 L1RE1Q9UN81 338 aa12.27□□□□□ -0.44
CAPN3-203ENST00000349748 SNX14Q9Y5W7 946 aa12.27□□□□□ -0.44
CAPN3-203ENST00000349748 ANKRD33BA6NCL7 494 aa12.27□□□□□ -0.45
CAPN3-203ENST00000349748 PTPN21Q16825 1174 aa12.27□□□□□ -0.45
CAPN3-203ENST00000349748 AP1ARQ63HQ0 302 aa12.27□□□□□ -0.45
CAPN3-203ENST00000349748 FAM71BQ8TC56 605 aa12.27□□□□□ -0.45
CAPN3-203ENST00000349748 ANKZF1Q9H8Y5 726 aa12.27□□□□□ -0.45
CAPN3-203ENST00000349748 BSDC1Q9NW68 430 aaPredicted RBP12.27□□□□□ -0.45
CAPN3-203ENST00000349748 PUF60Q9UHX1 559 aaKnown RBP12.27□□□□□ -0.45
CAPN3-203ENST00000349748 ROBO2Q9HCK4 1378 aa12.27□□□□□ -0.45
CAPN3-203ENST00000349748 ATP10DQ9P241 1426 aa12.27□□□□□ -0.45
CAPN3-203ENST00000349748 FYB1O15117 783 aa12.27□□□□□ -0.45
CAPN3-203ENST00000349748 RNF40O75150 1001 aa12.27□□□□□ -0.45
CAPN3-203ENST00000349748 ERCC3P19447 782 aa12.27□□□□□ -0.45
CAPN3-203ENST00000349748 FBLN1P23142 703 aa12.27□□□□□ -0.45
CAPN3-203ENST00000349748 ST3GAL1Q11201 340 aa12.27□□□□□ -0.45
CAPN3-203ENST00000349748 CASP8Q14790 479 aa12.27□□□□□ -0.45
CAPN3-203ENST00000349748 VWA3AA6NCI4 1184 aa12.26□□□□□ -0.45
CAPN3-203ENST00000349748 CAVIN2O95810 425 aa12.26□□□□□ -0.45
CAPN3-203ENST00000349748 ACTN3Q08043 901 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-203ENST00000349748 DDX11Q96FC9 970 aa12.26□□□□□ -0.45
CAPN3-203ENST00000349748 TACO1Q9BSH4 297 aaKnown RBP12.26□□□□□ -0.45
CAPN3-203ENST00000349748 IMPACTQ9P2X3 320 aa12.26□□□□□ -0.45
CAPN3-203ENST00000349748 ARHGAP23Q9P227 1491 aa12.26□□□□□ -0.45
CAPN3-203ENST00000349748 EBAG9O00559 213 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms