RNA–Protein interactions for RNA: ENST00000349721.7

SMARCA2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-203ENST00000349721 UBXN1Q04323 297 aa16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 SEL1L2Q5TEA6 688 aa16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 MAP2K2P36507 400 aa16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 CCDC25Q86WR0 208 aa16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 MSANTD4Q8NCY6 345 aa16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 SUDS3Q9H7L9 328 aaPredicted RBP16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 PRIM1P49642 420 aaKnown RBP16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 GOLGA6CA6NDK9 693 aa16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 IGSF3O75054 1194 aa16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 GOLGA6DP0CG33 693 aa16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 TRPC3Q13507 836 aa16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 GOLGA6AQ9NYA3 693 aa16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 SAMM50Q9Y512 469 aa16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 ARHGAP5Q13017 1502 aa16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 NCOA2Q15596 1464 aa16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 TTLL12Q14166 644 aaPredicted RBP16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 MCUR1Q96AQ8 359 aa16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 ALG1Q9BT22 464 aa16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 CSRNP2Q9H175 543 aa16.87■□□□□ 0.29
SMARCA2-203ENST00000349721 IMPG2Q9BZV3 1241 aa16.86■□□□□ 0.29
SMARCA2-203ENST00000349721 KRT23Q9C075 422 aa16.86■□□□□ 0.29
SMARCA2-203ENST00000349721 HMGB1P1B2RPK0 211 aaPredicted RBP16.86■□□□□ 0.29
SMARCA2-203ENST00000349721 TRAF1Q13077 416 aa16.86■□□□□ 0.29
SMARCA2-203ENST00000349721 ZNF644Q9H582 1327 aaPredicted RBP16.86■□□□□ 0.29
SMARCA2-203ENST00000349721 TTC36A6NLP5 189 aa16.86■□□□□ 0.29
SMARCA2-203ENST00000349721 ASIC1P78348 528 aa16.86■□□□□ 0.29
SMARCA2-203ENST00000349721 TSPY2A6NKD2 308 aa16.86■□□□□ 0.29
SMARCA2-203ENST00000349721 WHAMMP3Q1A5X7 153 aa16.86■□□□□ 0.29
SMARCA2-203ENST00000349721 U2AF2P26368 475 aaKnown RBP eCLIP16.85■□□□□ 0.291e-6■■■■■ 37.6
SMARCA2-203ENST00000349721 CCDC62Q6P9F0 684 aa16.85■□□□□ 0.29
SMARCA2-203ENST00000349721 TAF7Q15545 349 aaPredicted RBP16.85■□□□□ 0.29
SMARCA2-203ENST00000349721 PPP1R9BQ96SB3 815 aa16.85■□□□□ 0.29
SMARCA2-203ENST00000349721 NSD3Q9BZ95 1437 aa16.85■□□□□ 0.29
SMARCA2-203ENST00000349721 KLF18A0A0U1RQI7 1052 aa16.85■□□□□ 0.29
SMARCA2-203ENST00000349721 LMOD1P29536 600 aaPredicted RBP16.85■□□□□ 0.29
SMARCA2-203ENST00000349721 WDR78Q5VTH9 848 aa16.85■□□□□ 0.29
SMARCA2-203ENST00000349721 ZNF354CQ86Y25 554 aa16.85■□□□□ 0.29
SMARCA2-203ENST00000349721 HDAC9Q9UKV0 1011 aa16.85■□□□□ 0.29
SMARCA2-203ENST00000349721 LDHCP07864 332 aa16.85■□□□□ 0.29
SMARCA2-203ENST00000349721 GJC1P36383 396 aa16.85■□□□□ 0.29
SMARCA2-203ENST00000349721 INF2Q27J81 1249 aa16.85■□□□□ 0.29
SMARCA2-203ENST00000349721 RUFY4Q6ZNE9 571 aa16.85■□□□□ 0.29
SMARCA2-203ENST00000349721 TAOK1Q7L7X3 1001 aa16.85■□□□□ 0.29
SMARCA2-203ENST00000349721 ACTN4O43707 911 aaKnown RBP16.85■□□□□ 0.29
SMARCA2-203ENST00000349721 HSP90AA4PQ58FG1 418 aa16.85■□□□□ 0.29
SMARCA2-203ENST00000349721 ANKIB1Q9P2G1 1089 aa16.85■□□□□ 0.29
SMARCA2-203ENST00000349721 WTAPQ15007 396 aa16.84■□□□□ 0.29
SMARCA2-203ENST00000349721 RNF10Q8N5U6 811 aaKnown RBP16.84■□□□□ 0.29
SMARCA2-203ENST00000349721 EPSTI1Q96J88 318 aa16.84■□□□□ 0.29
SMARCA2-203ENST00000349721 NAPGQ99747 312 aaPredicted RBP16.84■□□□□ 0.29
SMARCA2-203ENST00000349721 BAG1Q99933 345 aaPredicted RBP16.84■□□□□ 0.29
SMARCA2-203ENST00000349721 ZBTB43O43298 467 aa16.84■□□□□ 0.29
SMARCA2-203ENST00000349721 HPDP32754 393 aaPredicted RBP16.84■□□□□ 0.29
SMARCA2-203ENST00000349721 TERF1P54274 439 aa16.84■□□□□ 0.29
SMARCA2-203ENST00000349721 CCDC184Q52MB2 194 aa16.84■□□□□ 0.29
SMARCA2-203ENST00000349721 CCT6BQ92526 530 aa16.84■□□□□ 0.29
SMARCA2-203ENST00000349721 TRIM14Q14142 442 aa16.84■□□□□ 0.29
SMARCA2-203ENST00000349721 IFNKQ9P0W0 207 aa16.84■□□□□ 0.29
SMARCA2-203ENST00000349721 TACC3Q9Y6A5 838 aa16.84■□□□□ 0.29
SMARCA2-203ENST00000349721 ARHGEF2Q92974 986 aaKnown RBP16.84■□□□□ 0.29
SMARCA2-203ENST00000349721 BRF1Q92994 677 aa16.84■□□□□ 0.29
SMARCA2-203ENST00000349721 CNNM2Q9H8M5 875 aa16.84■□□□□ 0.29
SMARCA2-203ENST00000349721 AKR1B15C9JRZ8 316 aaPredicted RBP16.83■□□□□ 0.29
SMARCA2-203ENST00000349721 SPTLC2O15270 562 aa16.83■□□□□ 0.29
SMARCA2-203ENST00000349721 CCDC122Q5T0U0 273 aa16.83■□□□□ 0.29
SMARCA2-203ENST00000349721 SDCCAG8Q86SQ7 713 aaPredicted RBP16.83■□□□□ 0.29
SMARCA2-203ENST00000349721 RRS1Q15050 365 aaKnown RBP16.83■□□□□ 0.29
SMARCA2-203ENST00000349721 ZNF365Q70YC5 407 aa16.83■□□□□ 0.29
SMARCA2-203ENST00000349721 AFAP1L2Q8N4X5 818 aa16.83■□□□□ 0.28
SMARCA2-203ENST00000349721 GBP5Q96PP8 586 aa16.83■□□□□ 0.28
SMARCA2-203ENST00000349721 FAM13AO94988 1023 aa16.83■□□□□ 0.28
SMARCA2-203ENST00000349721 IFT20Q8IY31 132 aa16.83■□□□□ 0.28
SMARCA2-203ENST00000349721 RAB3IPQ96QF0 476 aaPredicted RBP16.83■□□□□ 0.28
SMARCA2-203ENST00000349721 TTF2Q9UNY4 1162 aaKnown RBP16.83■□□□□ 0.28
SMARCA2-203ENST00000349721 PRDM2Q13029 1718 aa16.83■□□□□ 0.28
SMARCA2-203ENST00000349721 BAG3O95817 575 aa16.83■□□□□ 0.28
SMARCA2-203ENST00000349721 PDE1CQ14123 709 aaPredicted RBP16.83■□□□□ 0.28
SMARCA2-203ENST00000349721 BCAP29Q9UHQ4 241 aa16.83■□□□□ 0.28
SMARCA2-203ENST00000349721 SH3BP5O60239 455 aa16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 TRIM27P14373 513 aa16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 HSPA1LP34931 641 aa16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 ARID5AQ03989 594 aa16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 FAM160A1Q05DH4 1040 aa16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 C8orf74Q6P047 294 aa16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 VSIG1Q86XK7 387 aa16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 KCNH5Q8NCM2 988 aa16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 TTC16Q8NEE8 873 aa16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 DDX27Q96GQ7 796 aaKnown RBP16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 PAXIP1Q6ZW49 1069 aaPredicted RBP16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 CABS1Q96KC9 395 aa16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 VAT1LQ9HCJ6 419 aa16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 GNAQP50148 359 aa16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 ZNF131P52739 623 aa16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 NUCB1Q02818 461 aa16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 RAB3GAP1Q15042 981 aa16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 RAB11FIP4Q86YS3 637 aa16.82■□□□□ 0.28
SMARCA2-203ENST00000349721 DNM1Q05193 864 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms