RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 RTL9Q8NET4 1388 aa16.12■□□□□ 0.17
UBA3-201ENST00000349511 PUM3Q15397 648 aaKnown RBP16.12■□□□□ 0.17
UBA3-201ENST00000349511 TNRC6CQ9HCJ0 1690 aaKnown RBP16.12■□□□□ 0.17
UBA3-201ENST00000349511 A0A0D9SFI3 127 aa16.12■□□□□ 0.17
UBA3-201ENST00000349511 PHKA1P46020 1223 aa16.12■□□□□ 0.17
UBA3-201ENST00000349511 CLEC17AQ6ZS10 378 aa16.12■□□□□ 0.17
UBA3-201ENST00000349511 ZAP70P43403 619 aa16.11■□□□□ 0.17
UBA3-201ENST00000349511 LPIN2Q92539 896 aa16.11■□□□□ 0.17
UBA3-201ENST00000349511 CAMKK2Q96RR4 588 aa16.11■□□□□ 0.17
UBA3-201ENST00000349511 LRP5O75197 1615 aa16.11■□□□□ 0.17
UBA3-201ENST00000349511 PNPLA7Q6ZV29 1317 aa16.11■□□□□ 0.17
UBA3-201ENST00000349511 POLRMTO00411 1230 aaKnown RBP16.1■□□□□ 0.17
UBA3-201ENST00000349511 FGFR2P21802 821 aa16.1■□□□□ 0.17
UBA3-201ENST00000349511 MCAMP43121 646 aa16.1■□□□□ 0.17
UBA3-201ENST00000349511 RPS8P62241 208 aaKnown RBP16.1■□□□□ 0.17
UBA3-201ENST00000349511 CCDC102BQ68D86 513 aa16.1■□□□□ 0.17
UBA3-201ENST00000349511 SEC62Q99442 399 aaKnown RBP16.1■□□□□ 0.17
UBA3-201ENST00000349511 BSDC1Q9NW68 430 aaPredicted RBP16.1■□□□□ 0.17
UBA3-201ENST00000349511 MINPP1Q9UNW1 487 aa16.1■□□□□ 0.17
UBA3-201ENST00000349511 BAG4O95429 457 aaKnown RBP16.1■□□□□ 0.17
UBA3-201ENST00000349511 PALD1Q9ULE6 856 aa16.1■□□□□ 0.17
UBA3-201ENST00000349511 GOLGA6L22H0YM25 854 aa16.09■□□□□ 0.17
UBA3-201ENST00000349511 ST5P78524 1137 aa16.09■□□□□ 0.17
UBA3-201ENST00000349511 PTH1RQ03431 593 aa16.09■□□□□ 0.17
UBA3-201ENST00000349511 KBTBD3Q8NAB2 608 aa16.09■□□□□ 0.17
UBA3-201ENST00000349511 SLC5A1P13866 664 aa16.09■□□□□ 0.17
UBA3-201ENST00000349511 BCAMP50895 628 aa16.09■□□□□ 0.17
UBA3-201ENST00000349511 CCDC129Q6ZRS4 1044 aa16.09■□□□□ 0.17
UBA3-201ENST00000349511 KIAA1211Q6ZU35 1233 aa16.09■□□□□ 0.17
UBA3-201ENST00000349511 ZNF589Q86UQ0 364 aaPredicted RBP16.09■□□□□ 0.17
UBA3-201ENST00000349511 RUFY2Q8WXA3 655 aa16.09■□□□□ 0.17
UBA3-201ENST00000349511 IQSEC3Q9UPP2 1182 aaPredicted RBP16.09■□□□□ 0.17
UBA3-201ENST00000349511 SF3B2Q13435 895 aaKnown RBP16.08■□□□□ 0.16
UBA3-201ENST00000349511 LSG1Q9H089 658 aaKnown RBP16.08■□□□□ 0.16
UBA3-201ENST00000349511 CLCN1P35523 988 aa16.07■□□□□ 0.16
UBA3-201ENST00000349511 HIP1O00291 1037 aa16.07■□□□□ 0.16
UBA3-201ENST00000349511 MMP10P09238 476 aa16.07■□□□□ 0.16
UBA3-201ENST00000349511 NUCB2P80303 420 aa16.07■□□□□ 0.16
UBA3-201ENST00000349511 SLC15A2Q16348 729 aa16.07■□□□□ 0.16
UBA3-201ENST00000349511 NLGN1Q8N2Q7 840 aa16.07■□□□□ 0.16
UBA3-201ENST00000349511 PDGFDQ9GZP0 370 aaPredicted RBP16.07■□□□□ 0.16
UBA3-201ENST00000349511 HMGB2P26583 209 aaKnown RBP16.06■□□□□ 0.16
UBA3-201ENST00000349511 GYG1P46976 350 aa16.06■□□□□ 0.16
UBA3-201ENST00000349511 RPGRQ92834 1020 aaKnown RBP16.06■□□□□ 0.16
UBA3-201ENST00000349511 CYP2E1P05181 493 aaPredicted RBP16.06■□□□□ 0.16
UBA3-201ENST00000349511 KLRK1P26718 216 aa16.06■□□□□ 0.16
UBA3-201ENST00000349511 FLAD1Q8NFF5 587 aa16.06■□□□□ 0.16
UBA3-201ENST00000349511 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.06■□□□□ 0.16
UBA3-201ENST00000349511 AKAP11Q9UKA4 1901 aa16.05■□□□□ 0.16
UBA3-201ENST00000349511 RAD50Q92878 1312 aa16.05■□□□□ 0.16
UBA3-201ENST00000349511 ST18O60284 1047 aa16.05■□□□□ 0.16
UBA3-201ENST00000349511 KLHL40Q2TBA0 621 aa16.05■□□□□ 0.16
UBA3-201ENST00000349511 DDX49Q9Y6V7 483 aaKnown RBP16.05■□□□□ 0.16
UBA3-201ENST00000349511 MCCP23508 829 aa16.04■□□□□ 0.16
UBA3-201ENST00000349511 BAG6P46379 1132 aa16.04■□□□□ 0.16
UBA3-201ENST00000349511 KCNJ4P48050 445 aa16.04■□□□□ 0.16
UBA3-201ENST00000349511 GRAPQ13588 217 aa16.04■□□□□ 0.16
UBA3-201ENST00000349511 RASGRF1Q13972 1273 aa16.04■□□□□ 0.16
UBA3-201ENST00000349511 GRAPLQ8TC17 118 aaPredicted RBP16.04■□□□□ 0.16
UBA3-201ENST00000349511 STK32BQ9NY57 414 aa16.04■□□□□ 0.16
UBA3-201ENST00000349511 HMG20BQ9P0W2 317 aa16.04■□□□□ 0.16
UBA3-201ENST00000349511 MYO5AQ9Y4I1 1855 aaKnown RBP16.04■□□□□ 0.16
UBA3-201ENST00000349511 MCTP1Q6DN14 999 aa16.04■□□□□ 0.16
UBA3-201ENST00000349511 CWC22Q9HCG8 908 aaKnown RBP16.04■□□□□ 0.16
UBA3-201ENST00000349511 CCDC171Q6TFL3 1326 aa16.03■□□□□ 0.16
UBA3-201ENST00000349511 ARID4AP29374 1257 aaPredicted RBP16.03■□□□□ 0.16
UBA3-201ENST00000349511 PKP1Q13835 747 aa16.03■□□□□ 0.16
UBA3-201ENST00000349511 PRPF40BQ6NWY9 871 aaKnown RBP16.03■□□□□ 0.16
UBA3-201ENST00000349511 RASEFQ8IZ41 740 aa16.03■□□□□ 0.16
UBA3-201ENST00000349511 ANKIB1Q9P2G1 1089 aa16.03■□□□□ 0.16
UBA3-201ENST00000349511 PARP3Q9Y6F1 533 aa16.03■□□□□ 0.16
UBA3-201ENST00000349511 IDH1O75874 414 aaKnown RBP16.03■□□□□ 0.16
UBA3-201ENST00000349511 HSPA4P34932 840 aa16.03■□□□□ 0.16
UBA3-201ENST00000349511 ZGPATQ8N5A5 531 aaKnown RBP16.03■□□□□ 0.16
UBA3-201ENST00000349511 SPATA5Q8NB90 893 aa16.03■□□□□ 0.16
UBA3-201ENST00000349511 PIH1D3Q9NQM4 214 aaKnown RBP16.03■□□□□ 0.16
UBA3-201ENST00000349511 RNF113AO15541 343 aaKnown RBP16.02■□□□□ 0.16
UBA3-201ENST00000349511 UBE4AQ14139 1066 aa16.02■□□□□ 0.16
UBA3-201ENST00000349511 WASHC4Q2M389 1173 aa16.02■□□□□ 0.16
UBA3-201ENST00000349511 CRY2Q49AN0 593 aa16.02■□□□□ 0.16
UBA3-201ENST00000349511 MCMDC2Q4G0Z9 681 aa16.02■□□□□ 0.16
UBA3-201ENST00000349511 VPS37DQ86XT2 251 aa16.02■□□□□ 0.16
UBA3-201ENST00000349511 GPR101Q96P66 508 aaPredicted RBP16.02■□□□□ 0.16
UBA3-201ENST00000349511 UPF3BQ9BZI7 483 aaKnown RBP16.02■□□□□ 0.16
UBA3-201ENST00000349511 MED23Q9ULK4 1368 aa16.02■□□□□ 0.15
UBA3-201ENST00000349511 UTRNP46939 3433 aa16.02■□□□□ 0.15
UBA3-201ENST00000349511 A0A1B0GUL6 1792 aa16.02■□□□□ 0.15
UBA3-201ENST00000349511 RGPD3A6NKT7 1758 aaPredicted RBP16.02■□□□□ 0.15
UBA3-201ENST00000349511 RGPD4Q7Z3J3 1758 aa16.02■□□□□ 0.15
UBA3-201ENST00000349511 UQCRFS1P1P0C7P4 283 aa16.01■□□□□ 0.15
UBA3-201ENST00000349511 ILDR1Q86SU0 546 aaPredicted RBP16.01■□□□□ 0.15
UBA3-201ENST00000349511 TXNRD3Q86VQ6 643 aa16.01■□□□□ 0.15
UBA3-201ENST00000349511 OSBP2Q969R2 916 aa16.01■□□□□ 0.15
UBA3-201ENST00000349511 RBM8AQ9Y5S9 174 aaKnown RBP16.01■□□□□ 0.15
UBA3-201ENST00000349511 ESPNB1AK53 854 aa16.01■□□□□ 0.15
UBA3-201ENST00000349511 M0R2C6 588 aa16.01■□□□□ 0.15
UBA3-201ENST00000349511 NEK4P51957 841 aa16.01■□□□□ 0.15
UBA3-201ENST00000349511 VPS53Q5VIR6 699 aa16.01■□□□□ 0.15
UBA3-201ENST00000349511 TRIM44Q96DX7 344 aaPredicted RBP16.01■□□□□ 0.15
UBA3-201ENST00000349511 RBM17Q96I25 401 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms