RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 TM6SF1Q9BZW5 370 aa25.28■■□□□ 1.64
PTPN18-202ENST00000347849 USP25Q9UHP3 1055 aa25.28■■□□□ 1.64
PTPN18-202ENST00000347849 LIMCH1Q9UPQ0 1083 aa25.28■■□□□ 1.64
PTPN18-202ENST00000347849 RPAP1Q9BWH6 1393 aaPredicted RBP25.28■■□□□ 1.64
PTPN18-202ENST00000347849 ANKRD18BA2A2Z9 1011 aa25.28■■□□□ 1.64
PTPN18-202ENST00000347849 VPS53Q5VIR6 699 aa25.28■■□□□ 1.64
PTPN18-202ENST00000347849 FBXO3Q9UK99 471 aa25.28■■□□□ 1.64
PTPN18-202ENST00000347849 CNPY2Q9Y2B0 182 aa25.28■■□□□ 1.64
PTPN18-202ENST00000347849 CYP46A1Q9Y6A2 500 aa25.28■■□□□ 1.64
PTPN18-202ENST00000347849 LINC00116Q8NCU8 138 aa25.27■■□□□ 1.64
PTPN18-202ENST00000347849 CNNM1Q9NRU3 951 aa25.27■■□□□ 1.64
PTPN18-202ENST00000347849 GORABQ5T7V8 394 aa25.26■■□□□ 1.63
PTPN18-202ENST00000347849 USPL1Q5W0Q7 1092 aa25.26■■□□□ 1.63
PTPN18-202ENST00000347849 FNBP4Q8N3X1 1017 aaPredicted RBP25.26■■□□□ 1.63
PTPN18-202ENST00000347849 RFX7Q2KHR2 1363 aa25.26■■□□□ 1.63
PTPN18-202ENST00000347849 FAM184AQ8NB25 1140 aa25.26■■□□□ 1.63
PTPN18-202ENST00000347849 AKAP2Q9Y2D5 859 aa25.26■■□□□ 1.63
PTPN18-202ENST00000347849 ST3GAL1Q11201 340 aa25.25■■□□□ 1.63
PTPN18-202ENST00000347849 UVSSAQ2YD98 709 aa25.25■■□□□ 1.63
PTPN18-202ENST00000347849 TTC39AQ5SRH9 613 aa25.25■■□□□ 1.63
PTPN18-202ENST00000347849 VGLL2Q8N8G2 317 aa25.25■■□□□ 1.63
PTPN18-202ENST00000347849 ATP2B3Q16720 1220 aa25.25■■□□□ 1.63
PTPN18-202ENST00000347849 HELBQ8NG08 1087 aaPredicted RBP25.25■■□□□ 1.63
PTPN18-202ENST00000347849 TCHHQ07283 1943 aa25.25■■□□□ 1.63
PTPN18-202ENST00000347849 A0A0G2JLW4 131 aa25.24■■□□□ 1.63
PTPN18-202ENST00000347849 CCDC158Q5M9N0 1113 aa25.24■■□□□ 1.63
PTPN18-202ENST00000347849 CCDC183Q5T5S1 534 aa25.24■■□□□ 1.63
PTPN18-202ENST00000347849 SEC31BQ9NQW1 1179 aa25.24■■□□□ 1.63
PTPN18-202ENST00000347849 SNAP23O00161 211 aa25.24■■□□□ 1.63
PTPN18-202ENST00000347849 ADCY5O95622 1261 aa25.24■■□□□ 1.63
PTPN18-202ENST00000347849 USP21Q9UK80 565 aa25.24■■□□□ 1.63
PTPN18-202ENST00000347849 NIP7Q9Y221 180 aaKnown RBP eCLIP25.24■■□□□ 1.63
PTPN18-202ENST00000347849 SH3TC1Q8TE82 1336 aa25.24■■□□□ 1.63
PTPN18-202ENST00000347849 ZAP70P43403 619 aa25.23■■□□□ 1.63
PTPN18-202ENST00000347849 ZMYM1Q5SVZ6 1142 aa25.23■■□□□ 1.63
PTPN18-202ENST00000347849 TPCN1Q9ULQ1 816 aa25.23■■□□□ 1.63
PTPN18-202ENST00000347849 CYP21A2P08686 494 aa25.23■■□□□ 1.63
PTPN18-202ENST00000347849 ME3Q16798 604 aa25.23■■□□□ 1.63
PTPN18-202ENST00000347849 CCDC83Q8IWF9 413 aa25.23■■□□□ 1.63
PTPN18-202ENST00000347849 SMARCC1Q92922 1105 aaPredicted RBP25.23■■□□□ 1.63
PTPN18-202ENST00000347849 TTC12Q9H892 705 aaPredicted RBP25.23■■□□□ 1.63
PTPN18-202ENST00000347849 ZSCAN22P10073 491 aaPredicted RBP25.22■■□□□ 1.63
PTPN18-202ENST00000347849 MTERF4Q7Z6M4 381 aaKnown RBP25.22■■□□□ 1.63
PTPN18-202ENST00000347849 NECAB1Q8N987 351 aa25.22■■□□□ 1.63
PTPN18-202ENST00000347849 UTP14AQ9BVJ6 771 aaKnown RBP25.22■■□□□ 1.63
PTPN18-202ENST00000347849 RNF20Q5VTR2 975 aa25.22■■□□□ 1.63
PTPN18-202ENST00000347849 TMEM87AQ8NBN3 555 aa25.22■■□□□ 1.63
PTPN18-202ENST00000347849 MAST3O60307 1309 aa25.21■■□□□ 1.63
PTPN18-202ENST00000347849 M0R2C6 588 aa25.21■■□□□ 1.63
PTPN18-202ENST00000347849 RNF113AO15541 343 aaKnown RBP25.21■■□□□ 1.63
PTPN18-202ENST00000347849 NTSR2O95665 410 aa25.21■■□□□ 1.63
PTPN18-202ENST00000347849 SYT1P21579 422 aa25.21■■□□□ 1.63
PTPN18-202ENST00000347849 NOLC1Q14978 699 aaKnown RBP eCLIP25.21■■□□□ 1.63
PTPN18-202ENST00000347849 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.21■■□□□ 1.63
PTPN18-202ENST00000347849 OSBP2Q969R2 916 aa25.21■■□□□ 1.63
PTPN18-202ENST00000347849 RREB1Q92766 1687 aa25.2■■□□□ 1.63
PTPN18-202ENST00000347849 STX6O43752 255 aa25.2■■□□□ 1.62
PTPN18-202ENST00000347849 PDE8BO95263 885 aa25.2■■□□□ 1.62
PTPN18-202ENST00000347849 MCAMP43121 646 aa25.2■■□□□ 1.62
PTPN18-202ENST00000347849 BLOC1S2Q6QNY1 142 aa25.2■■□□□ 1.62
PTPN18-202ENST00000347849 MYH3P11055 1940 aa25.2■■□□□ 1.62
PTPN18-202ENST00000347849 RPS6KB1P23443 525 aa25.2■■□□□ 1.62
PTPN18-202ENST00000347849 TSGA10IPQ3SY00 556 aa25.2■■□□□ 1.62
PTPN18-202ENST00000347849 C17orf53Q8N3J3 647 aaPredicted RBP25.2■■□□□ 1.62
PTPN18-202ENST00000347849 PIBF1Q8WXW3 757 aa25.2■■□□□ 1.62
PTPN18-202ENST00000347849 HELLSQ9NRZ9 838 aa25.2■■□□□ 1.62
PTPN18-202ENST00000347849 FIBPO43427 364 aa25.19■■□□□ 1.62
PTPN18-202ENST00000347849 LETM1O95202 739 aaPredicted RBP25.19■■□□□ 1.62
PTPN18-202ENST00000347849 PSMA5P28066 241 aa25.19■■□□□ 1.62
PTPN18-202ENST00000347849 UBE2HP62256 183 aa25.19■■□□□ 1.62
PTPN18-202ENST00000347849 PLCB2Q00722 1185 aa25.19■■□□□ 1.62
PTPN18-202ENST00000347849 TOB2Q14106 344 aaPredicted RBP25.19■■□□□ 1.62
PTPN18-202ENST00000347849 STOX1Q6ZVD7 989 aa25.19■■□□□ 1.62
PTPN18-202ENST00000347849 MYRIPQ8NFW9 859 aa25.19■■□□□ 1.62
PTPN18-202ENST00000347849 HMG20BQ9P0W2 317 aa25.18■■□□□ 1.62
PTPN18-202ENST00000347849 SMC3Q9UQE7 1217 aa25.18■■□□□ 1.62
PTPN18-202ENST00000347849 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.18■■□□□ 1.62
PTPN18-202ENST00000347849 U3KPZ7 1027 aaPredicted RBP25.18■■□□□ 1.62
PTPN18-202ENST00000347849 HSPD1P10809 573 aaKnown RBP25.17■■□□□ 1.62
PTPN18-202ENST00000347849 PHKA1P46020 1223 aa25.17■■□□□ 1.62
PTPN18-202ENST00000347849 TSC1Q92574 1164 aa25.17■■□□□ 1.62
PTPN18-202ENST00000347849 F13A1P00488 732 aa25.16■■□□□ 1.62
PTPN18-202ENST00000347849 FOXP2O15409 715 aa25.15■■□□□ 1.62
PTPN18-202ENST00000347849 PARP10Q53GL7 1025 aa25.15■■□□□ 1.62
PTPN18-202ENST00000347849 GIMAP6Q6P9H5 292 aa25.15■■□□□ 1.62
PTPN18-202ENST00000347849 C3orf67Q6ZVT6 689 aa25.15■■□□□ 1.62
PTPN18-202ENST00000347849 EP400Q96L91 3159 aa25.15■■□□□ 1.62
PTPN18-202ENST00000347849 COL4A1P02462 1669 aa25.15■■□□□ 1.62
PTPN18-202ENST00000347849 KDM4AO75164 1064 aa25.15■■□□□ 1.62
PTPN18-202ENST00000347849 TTLL5Q6EMB2 1281 aa25.15■■□□□ 1.62
PTPN18-202ENST00000347849 AMIGO3Q86WK7 504 aa25.15■■□□□ 1.62
PTPN18-202ENST00000347849 NEK1Q96PY6 1258 aa25.15■■□□□ 1.62
PTPN18-202ENST00000347849 COL5A3P25940 1745 aaPredicted RBP25.15■■□□□ 1.62
PTPN18-202ENST00000347849 CICQ96RK0 1608 aaPredicted RBP25.15■■□□□ 1.62
PTPN18-202ENST00000347849 BICDL1Q6ZP65 573 aa25.14■■□□□ 1.62
PTPN18-202ENST00000347849 LRRC2Q9BYS8 371 aa25.14■■□□□ 1.62
PTPN18-202ENST00000347849 CCDC102BQ68D86 513 aa25.14■■□□□ 1.61
PTPN18-202ENST00000347849 PUS7LQ9H0K6 701 aaKnown RBP25.14■■□□□ 1.61
PTPN18-202ENST00000347849 FGFR2P21802 821 aa25.13■■□□□ 1.61
PTPN18-202ENST00000347849 GJB2P29033 226 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms