RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 IQGAP1P46940 1657 aa17■□□□□ 0.31
NUP50-201ENST00000347635 CEP152O94986 1710 aa16.99■□□□□ 0.31
NUP50-201ENST00000347635 TUBB4AP04350 444 aa16.99■□□□□ 0.31
NUP50-201ENST00000347635 IKQ13123 557 aaPredicted RBP16.99■□□□□ 0.31
NUP50-201ENST00000347635 CUL4AQ13619 759 aa16.99■□□□□ 0.31
NUP50-201ENST00000347635 GBP3Q9H0R5 595 aa16.99■□□□□ 0.31
NUP50-201ENST00000347635 TFCP2Q12800 502 aa16.99■□□□□ 0.31
NUP50-201ENST00000347635 KLHL10Q6JEL2 608 aa16.99■□□□□ 0.31
NUP50-201ENST00000347635 TMX1Q9H3N1 280 aa16.99■□□□□ 0.31
NUP50-201ENST00000347635 SLC52A2Q9HAB3 445 aa16.99■□□□□ 0.31
NUP50-201ENST00000347635 IQSEC2Q5JU85 1478 aa16.99■□□□□ 0.31
NUP50-201ENST00000347635 ERVV-2B6SEH9 535 aa16.99■□□□□ 0.31
NUP50-201ENST00000347635 LDHCP07864 332 aa16.99■□□□□ 0.31
NUP50-201ENST00000347635 ATL3Q6DD88 541 aa16.99■□□□□ 0.31
NUP50-201ENST00000347635 DZIP3Q86Y13 1208 aaKnown RBP16.99■□□□□ 0.31
NUP50-201ENST00000347635 LEO1Q8WVC0 666 aaPredicted RBP16.99■□□□□ 0.31
NUP50-201ENST00000347635 UTP14AQ9BVJ6 771 aaKnown RBP16.99■□□□□ 0.31
NUP50-201ENST00000347635 DIP2CQ9Y2E4 1556 aa16.99■□□□□ 0.31
NUP50-201ENST00000347635 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.99■□□□□ 0.315e-6■□□□□ 10.1
NUP50-201ENST00000347635 SPTY2D1Q68D10 685 aaPredicted RBP16.98■□□□□ 0.31
NUP50-201ENST00000347635 NLRP3Q96P20 1036 aa16.98■□□□□ 0.31
NUP50-201ENST00000347635 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.98■□□□□ 0.31
NUP50-201ENST00000347635 V9GYY5 206 aaPredicted RBP16.98■□□□□ 0.31
NUP50-201ENST00000347635 IFIT3O14879 490 aaKnown RBP16.98■□□□□ 0.31
NUP50-201ENST00000347635 SPTLC2O15270 562 aa16.98■□□□□ 0.31
NUP50-201ENST00000347635 IL15P40933 162 aaPredicted RBP16.98■□□□□ 0.31
NUP50-201ENST00000347635 ME3Q16798 604 aa16.98■□□□□ 0.31
NUP50-201ENST00000347635 CCDC148Q8NFR7 591 aa16.98■□□□□ 0.31
NUP50-201ENST00000347635 ZFYP08048 801 aaPredicted RBP16.97■□□□□ 0.31
NUP50-201ENST00000347635 KIF4BQ2VIQ3 1234 aa16.97■□□□□ 0.31
NUP50-201ENST00000347635 LMBR1LQ6UX01 489 aa16.97■□□□□ 0.31
NUP50-201ENST00000347635 CEP89Q96ST8 783 aa16.97■□□□□ 0.31
NUP50-201ENST00000347635 FAM160A1Q05DH4 1040 aa16.97■□□□□ 0.31
NUP50-201ENST00000347635 CCDC144CPQ8IYA2 1237 aa16.97■□□□□ 0.31
NUP50-201ENST00000347635 DNAI1Q9UI46 699 aa16.97■□□□□ 0.31
NUP50-201ENST00000347635 IQCEQ6IPM2 695 aa16.97■□□□□ 0.31
NUP50-201ENST00000347635 MICU3Q86XE3 530 aa16.97■□□□□ 0.31
NUP50-201ENST00000347635 DZIP1Q86YF9 867 aaKnown RBP16.97■□□□□ 0.31
NUP50-201ENST00000347635 CPSF1Q10570 1443 aaKnown RBP16.97■□□□□ 0.31
NUP50-201ENST00000347635 DTNBO60941 627 aa16.96■□□□□ 0.31
NUP50-201ENST00000347635 EPS15P42566 896 aa16.96■□□□□ 0.31
NUP50-201ENST00000347635 TPTE2Q6XPS3 522 aa16.96■□□□□ 0.31
NUP50-201ENST00000347635 GNG11P61952 73 aa16.96■□□□□ 0.31
NUP50-201ENST00000347635 TMEM67Q5HYA8 995 aa16.96■□□□□ 0.31
NUP50-201ENST00000347635 JAKMIP3Q5VZ66 844 aa16.96■□□□□ 0.31
NUP50-201ENST00000347635 CLEC17AQ6ZS10 378 aa16.96■□□□□ 0.31
NUP50-201ENST00000347635 ANKRD18AQ8IVF6 992 aa16.96■□□□□ 0.31
NUP50-201ENST00000347635 CDK5RAP3Q96JB5 506 aa16.96■□□□□ 0.31
NUP50-201ENST00000347635 MTMR6Q9Y217 621 aa16.96■□□□□ 0.31
NUP50-201ENST00000347635 ALG1Q9BT22 464 aa16.96■□□□□ 0.31
NUP50-201ENST00000347635 KIF2CQ99661 725 aa16.95■□□□□ 0.3
NUP50-201ENST00000347635 UNC5CLQ8IV45 518 aa16.95■□□□□ 0.3
NUP50-201ENST00000347635 CCDC82Q8N4S0 544 aa16.95■□□□□ 0.3
NUP50-201ENST00000347635 CPLX3Q8WVH0 158 aa16.95■□□□□ 0.3
NUP50-201ENST00000347635 LLPHQ9BRT6 129 aaKnown RBP16.95■□□□□ 0.3
NUP50-201ENST00000347635 LSG1Q9H089 658 aaKnown RBP16.95■□□□□ 0.3
NUP50-201ENST00000347635 RNF41Q9H4P4 317 aaPredicted RBP16.95■□□□□ 0.3
NUP50-201ENST00000347635 RNF113AO15541 343 aaKnown RBP16.95■□□□□ 0.3
NUP50-201ENST00000347635 PTH1RQ03431 593 aa16.95■□□□□ 0.3
NUP50-201ENST00000347635 PARP10Q53GL7 1025 aa16.95■□□□□ 0.3
NUP50-201ENST00000347635 CCDC43Q96MW1 224 aaKnown RBP16.95■□□□□ 0.3
NUP50-201ENST00000347635 DEF6Q9H4E7 631 aa16.95■□□□□ 0.3
NUP50-201ENST00000347635 NIP7Q9Y221 180 aaKnown RBP eCLIP16.95■□□□□ 0.3
NUP50-201ENST00000347635 POTEB2H3BUK9 544 aa16.95■□□□□ 0.3
NUP50-201ENST00000347635 PRC1O43663 620 aa16.95■□□□□ 0.3
NUP50-201ENST00000347635 CDR1P51861 262 aa16.95■□□□□ 0.3
NUP50-201ENST00000347635 KIAA1328Q86T90 577 aa16.95■□□□□ 0.3
NUP50-201ENST00000347635 ZSWIM6Q9HCJ5 1215 aa16.95■□□□□ 0.3
NUP50-201ENST00000347635 IFNKQ9P0W0 207 aa16.95■□□□□ 0.3
NUP50-201ENST00000347635 MED14O60244 1454 aa16.95■□□□□ 0.3
NUP50-201ENST00000347635 CCDC181Q5TID7 509 aa16.94■□□□□ 0.3
NUP50-201ENST00000347635 KANK3Q6NY19 840 aa16.94■□□□□ 0.3
NUP50-201ENST00000347635 CHST3Q7LGC8 479 aa16.94■□□□□ 0.3
NUP50-201ENST00000347635 MARCKSP29966 332 aaPredicted RBP16.94■□□□□ 0.3
NUP50-201ENST00000347635 GTF2F1P35269 517 aaKnown RBP eCLIP16.94■□□□□ 0.34e-6■■■■□ 25.2
NUP50-201ENST00000347635 PLBD2Q8NHP8 589 aa16.94■□□□□ 0.3
NUP50-201ENST00000347635 SRRTQ9BXP5 876 aaKnown RBP16.94■□□□□ 0.3
NUP50-201ENST00000347635 SLC26A6Q9BXS9 759 aa16.94■□□□□ 0.3
NUP50-201ENST00000347635 LGR6Q9HBX8 967 aa16.94■□□□□ 0.3
NUP50-201ENST00000347635 LMOD1P29536 600 aaPredicted RBP16.94■□□□□ 0.3
NUP50-201ENST00000347635 EIF4A1P60842 406 aaKnown RBP16.94■□□□□ 0.3
NUP50-201ENST00000347635 HELLSQ9NRZ9 838 aa16.94■□□□□ 0.3
NUP50-201ENST00000347635 CCDC129Q6ZRS4 1044 aa16.93■□□□□ 0.3
NUP50-201ENST00000347635 BRAPQ7Z569 592 aa16.93■□□□□ 0.3
NUP50-201ENST00000347635 BCL2L12Q9HB09 334 aa16.93■□□□□ 0.3
NUP50-201ENST00000347635 NSFL1CQ9UNZ2 370 aaKnown RBP16.93■□□□□ 0.3
NUP50-201ENST00000347635 CAMSAP1Q5T5Y3 1602 aa16.93■□□□□ 0.3
NUP50-201ENST00000347635 ARHGEF25Q86VW2 580 aa16.93■□□□□ 0.3
NUP50-201ENST00000347635 ZSCAN29Q8IWY8 852 aaPredicted RBP16.93■□□□□ 0.3
NUP50-201ENST00000347635 SUCLG2Q96I99 432 aa16.93■□□□□ 0.3
NUP50-201ENST00000347635 TSPYL1Q9H0U9 437 aa16.93■□□□□ 0.3
NUP50-201ENST00000347635 U2AF2P26368 475 aaKnown RBP eCLIP16.93■□□□□ 0.3
NUP50-201ENST00000347635 USP5P45974 858 aa16.93■□□□□ 0.3
NUP50-201ENST00000347635 EIF5P55010 431 aaKnown RBP16.93■□□□□ 0.3
NUP50-201ENST00000347635 TNNI3KQ59H18 835 aa16.93■□□□□ 0.3
NUP50-201ENST00000347635 NBPF14Q5TI25 921 aa16.93■□□□□ 0.3
NUP50-201ENST00000347635 CCDC12Q8WUD4 166 aaPredicted RBP16.93■□□□□ 0.3
NUP50-201ENST00000347635 USP21Q9UK80 565 aa16.93■□□□□ 0.3
NUP50-201ENST00000347635 FPGT-TNNI3KV9GXZ4 949 aa16.93■□□□□ 0.3
NUP50-201ENST00000347635 LRRC7Q96NW7 1537 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms