RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 HELLSQ9NRZ9 838 aa25.85■■□□□ 1.73
TSPAN3-202ENST00000346495 PNPLA7Q6ZV29 1317 aa25.85■■□□□ 1.73
TSPAN3-202ENST00000346495 MYH7P12883 1935 aa25.85■■□□□ 1.73
TSPAN3-202ENST00000346495 RNF113AO15541 343 aaKnown RBP25.85■■□□□ 1.73
TSPAN3-202ENST00000346495 ZFYP08048 801 aaPredicted RBP25.85■■□□□ 1.73
TSPAN3-202ENST00000346495 PTH1RQ03431 593 aa25.85■■□□□ 1.73
TSPAN3-202ENST00000346495 EN1Q05925 392 aaPredicted RBP25.85■■□□□ 1.73
TSPAN3-202ENST00000346495 GRAPQ13588 217 aa25.85■■□□□ 1.73
TSPAN3-202ENST00000346495 GRAPLQ8TC17 118 aaPredicted RBP25.85■■□□□ 1.73
TSPAN3-202ENST00000346495 PALD1Q9ULE6 856 aa25.85■■□□□ 1.73
TSPAN3-202ENST00000346495 NRXN2Q9P2S2 1712 aa25.84■■□□□ 1.73
TSPAN3-202ENST00000346495 SNAP23O00161 211 aa25.84■■□□□ 1.73
TSPAN3-202ENST00000346495 CRY2Q49AN0 593 aa25.84■■□□□ 1.73
TSPAN3-202ENST00000346495 RPGRQ92834 1020 aaKnown RBP25.84■■□□□ 1.73
TSPAN3-202ENST00000346495 QSER1Q2KHR3 1735 aa25.84■■□□□ 1.73
TSPAN3-202ENST00000346495 SF3B2Q13435 895 aaKnown RBP25.83■■□□□ 1.73
TSPAN3-202ENST00000346495 ZMYM1Q5SVZ6 1142 aa25.83■■□□□ 1.73
TSPAN3-202ENST00000346495 IL27Q8NEV9 243 aa25.83■■□□□ 1.73
TSPAN3-202ENST00000346495 MAP4K1Q92918 833 aa25.83■■□□□ 1.73
TSPAN3-202ENST00000346495 ST18O60284 1047 aa25.82■■□□□ 1.72
TSPAN3-202ENST00000346495 PI16Q6UXB8 463 aa25.81■■□□□ 1.72
TSPAN3-202ENST00000346495 ZNF589Q86UQ0 364 aaPredicted RBP25.81■■□□□ 1.72
TSPAN3-202ENST00000346495 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.81■■□□□ 1.72
TSPAN3-202ENST00000346495 STK32BQ9NY57 414 aa25.81■■□□□ 1.72
TSPAN3-202ENST00000346495 ZSCAN25Q6NSZ9 544 aa25.81■■□□□ 1.72
TSPAN3-202ENST00000346495 RBM17Q96I25 401 aaKnown RBP25.81■■□□□ 1.72
TSPAN3-202ENST00000346495 HMG20BQ9P0W2 317 aa25.81■■□□□ 1.72
TSPAN3-202ENST00000346495 CYP2E1P05181 493 aaPredicted RBP25.8■■□□□ 1.72
TSPAN3-202ENST00000346495 BAG6P46379 1132 aa25.8■■□□□ 1.72
TSPAN3-202ENST00000346495 KCNJ4P48050 445 aa25.8■■□□□ 1.72
TSPAN3-202ENST00000346495 SLC15A2Q16348 729 aa25.8■■□□□ 1.72
TSPAN3-202ENST00000346495 SPATA5Q8NB90 893 aa25.8■■□□□ 1.72
TSPAN3-202ENST00000346495 RBM8AQ9Y5S9 174 aaKnown RBP25.8■■□□□ 1.72
TSPAN3-202ENST00000346495 K7ELQ4 463 aaPredicted RBP25.79■■□□□ 1.72
TSPAN3-202ENST00000346495 CHGBP05060 677 aa25.79■■□□□ 1.72
TSPAN3-202ENST00000346495 BCAMP50895 628 aa25.79■■□□□ 1.72
TSPAN3-202ENST00000346495 NECTIN1Q15223 517 aa25.79■■□□□ 1.72
TSPAN3-202ENST00000346495 KCNB2Q92953 911 aa25.79■■□□□ 1.72
TSPAN3-202ENST00000346495 SEC62Q99442 399 aaKnown RBP25.79■■□□□ 1.72
TSPAN3-202ENST00000346495 GNL3LQ9NVN8 582 aaKnown RBP25.79■■□□□ 1.72
TSPAN3-202ENST00000346495 SNX14Q9Y5W7 946 aa25.79■■□□□ 1.72
TSPAN3-202ENST00000346495 KLRG2A4D1S0 409 aaPredicted RBP25.78■■□□□ 1.72
TSPAN3-202ENST00000346495 CD2BP2O95400 341 aaKnown RBP25.78■■□□□ 1.72
TSPAN3-202ENST00000346495 RASGRF1Q13972 1273 aa25.78■■□□□ 1.72
TSPAN3-202ENST00000346495 CAVIN4Q5BKX8 364 aa25.78■■□□□ 1.72
TSPAN3-202ENST00000346495 ZNF804BA4D1E1 1349 aa25.78■■□□□ 1.72
TSPAN3-202ENST00000346495 ANKRD31Q8N7Z5 1873 aa25.78■■□□□ 1.72
TSPAN3-202ENST00000346495 ANO8Q9HCE9 1232 aaPredicted RBP25.77■■□□□ 1.72
TSPAN3-202ENST00000346495 PARP3Q9Y6F1 533 aa25.77■■□□□ 1.72
TSPAN3-202ENST00000346495 DOCK2Q92608 1830 aa25.77■■□□□ 1.72
TSPAN3-202ENST00000346495 HOXA10P31260 410 aaPredicted RBP25.77■■□□□ 1.72
TSPAN3-202ENST00000346495 PRPF40BQ6NWY9 871 aaKnown RBP25.77■■□□□ 1.72
TSPAN3-202ENST00000346495 CCDC129Q6ZRS4 1044 aa25.77■■□□□ 1.72
TSPAN3-202ENST00000346495 BRIP1Q9BX63 1249 aa25.77■■□□□ 1.72
TSPAN3-202ENST00000346495 MMP10P09238 476 aa25.76■■□□□ 1.71
TSPAN3-202ENST00000346495 NEK4P51957 841 aa25.76■■□□□ 1.71
TSPAN3-202ENST00000346495 RNF20Q5VTR2 975 aa25.76■■□□□ 1.71
TSPAN3-202ENST00000346495 APPBP2Q92624 585 aa25.76■■□□□ 1.71
TSPAN3-202ENST00000346495 PIH1D3Q9NQM4 214 aaKnown RBP25.76■■□□□ 1.71
TSPAN3-202ENST00000346495 MYO5AQ9Y4I1 1855 aaKnown RBP25.75■■□□□ 1.71
TSPAN3-202ENST00000346495 MAST3O60307 1309 aa25.75■■□□□ 1.71
TSPAN3-202ENST00000346495 ZKSCAN1P17029 563 aaPredicted RBP25.75■■□□□ 1.71
TSPAN3-202ENST00000346495 CREB3L3Q68CJ9 461 aa25.75■■□□□ 1.71
TSPAN3-202ENST00000346495 CRAMP1Q96RY5 1269 aa25.75■■□□□ 1.71
TSPAN3-202ENST00000346495 U3KPZ7 1027 aaPredicted RBP25.75■■□□□ 1.71
TSPAN3-202ENST00000346495 ADD2P35612 726 aa25.74■■□□□ 1.71
TSPAN3-202ENST00000346495 GYG1P46976 350 aa25.74■■□□□ 1.71
TSPAN3-202ENST00000346495 WASHC4Q2M389 1173 aa25.74■■□□□ 1.71
TSPAN3-202ENST00000346495 SLFNL1Q499Z3 407 aa25.74■■□□□ 1.71
TSPAN3-202ENST00000346495 RASEFQ8IZ41 740 aa25.74■■□□□ 1.71
TSPAN3-202ENST00000346495 BBOX1O75936 387 aa25.74■■□□□ 1.71
TSPAN3-202ENST00000346495 MCM2P49736 904 aa25.74■■□□□ 1.71
TSPAN3-202ENST00000346495 VPS37DQ86XT2 251 aa25.74■■□□□ 1.71
TSPAN3-202ENST00000346495 DSCC1Q9BVC3 393 aa25.74■■□□□ 1.71
TSPAN3-202ENST00000346495 LEMD3Q9Y2U8 911 aa25.74■■□□□ 1.71
TSPAN3-202ENST00000346495 SLC27A2O14975 620 aa25.73■■□□□ 1.71
TSPAN3-202ENST00000346495 IDH1O75874 414 aaKnown RBP25.73■■□□□ 1.71
TSPAN3-202ENST00000346495 UBE3CQ15386 1083 aa25.73■■□□□ 1.71
TSPAN3-202ENST00000346495 OSBP2Q969R2 916 aa25.73■■□□□ 1.71
TSPAN3-202ENST00000346495 FAM84BQ96KN1 310 aaPredicted RBP25.73■■□□□ 1.71
TSPAN3-202ENST00000346495 M0R2C6 588 aa25.72■■□□□ 1.71
TSPAN3-202ENST00000346495 SEMA3EO15041 775 aa25.72■■□□□ 1.71
TSPAN3-202ENST00000346495 SLC9C2Q5TAH2 1124 aa25.72■■□□□ 1.71
TSPAN3-202ENST00000346495 FBXO33Q7Z6M2 555 aa25.72■■□□□ 1.71
TSPAN3-202ENST00000346495 XDHP47989 1333 aa25.72■■□□□ 1.71
TSPAN3-202ENST00000346495 WTIPA6NIX2 430 aaPredicted RBP25.71■■□□□ 1.71
TSPAN3-202ENST00000346495 MAP3K12Q12852 859 aa25.71■■□□□ 1.71
TSPAN3-202ENST00000346495 MSL1Q68DK7 614 aa25.71■■□□□ 1.71
TSPAN3-202ENST00000346495 TMC4Q7Z404 712 aa25.71■■□□□ 1.71
TSPAN3-202ENST00000346495 TM6SF1Q9BZW5 370 aa25.71■■□□□ 1.71
TSPAN3-202ENST00000346495 ANKIB1Q9P2G1 1089 aa25.71■■□□□ 1.71
TSPAN3-202ENST00000346495 PDE6BP35913 854 aa25.7■■□□□ 1.71
TSPAN3-202ENST00000346495 DENND2AQ9ULE3 1009 aa25.7■■□□□ 1.71
TSPAN3-202ENST00000346495 MYH13Q9UKX3 1938 aa25.7■■□□□ 1.71
TSPAN3-202ENST00000346495 ZBTB22O15209 634 aa25.7■■□□□ 1.7
TSPAN3-202ENST00000346495 SPRYD3Q8NCJ5 442 aa25.7■■□□□ 1.7
TSPAN3-202ENST00000346495 SLKQ9H2G2 1235 aaPredicted RBP25.7■■□□□ 1.7
TSPAN3-202ENST00000346495 PDE6AP16499 860 aa25.69■■□□□ 1.7
TSPAN3-202ENST00000346495 HIBADHP31937 336 aaKnown RBP25.69■■□□□ 1.7
TSPAN3-202ENST00000346495 TSGA10IPQ3SY00 556 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms