RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 ABT1Q9ULW3 272 aaKnown RBP18.28■□□□□ 0.52
HMGN3-202ENST00000344726 NBPF7P0C2Y1 421 aaPredicted RBP18.27■□□□□ 0.52
HMGN3-202ENST00000344726 DEFB115Q30KQ5 88 aa18.27■□□□□ 0.52
HMGN3-202ENST00000344726 LMBR1LQ6UX01 489 aa18.27■□□□□ 0.52
HMGN3-202ENST00000344726 KAZALD1Q96I82 304 aa18.27■□□□□ 0.52
HMGN3-202ENST00000344726 GMLQ99445 158 aa18.27■□□□□ 0.52
HMGN3-202ENST00000344726 ASTN2O75129 1339 aaPredicted RBP18.26■□□□□ 0.51
HMGN3-202ENST00000344726 IRS2Q9Y4H2 1338 aa18.26■□□□□ 0.51
HMGN3-202ENST00000344726 ANKRD18BA2A2Z9 1011 aa18.26■□□□□ 0.51
HMGN3-202ENST00000344726 G3V3G9 751 aa18.26■□□□□ 0.51
HMGN3-202ENST00000344726 SNAP23O00161 211 aa18.26■□□□□ 0.51
HMGN3-202ENST00000344726 CHRNDQ07001 517 aa18.26■□□□□ 0.51
HMGN3-202ENST00000344726 RBM26Q5T8P6 1007 aaKnown RBP18.26■□□□□ 0.51
HMGN3-202ENST00000344726 DCAF8Q5TAQ9 597 aa18.26■□□□□ 0.51
HMGN3-202ENST00000344726 RSBN1LQ6PCB5 846 aaPredicted RBP18.26■□□□□ 0.51
HMGN3-202ENST00000344726 SUCLG2Q96I99 432 aa18.26■□□□□ 0.51
HMGN3-202ENST00000344726 MXD3Q9BW11 206 aa18.26■□□□□ 0.51
HMGN3-202ENST00000344726 SMC4Q9NTJ3 1288 aa18.26■□□□□ 0.51
HMGN3-202ENST00000344726 CHMP3Q9Y3E7 222 aa18.26■□□□□ 0.51
HMGN3-202ENST00000344726 UTYO14607 1347 aa18.25■□□□□ 0.51
HMGN3-202ENST00000344726 CELF2O95319 508 aaKnown RBP18.25■□□□□ 0.51
HMGN3-202ENST00000344726 KIF4BQ2VIQ3 1234 aa18.25■□□□□ 0.51
HMGN3-202ENST00000344726 USP48Q86UV5 1035 aa18.25■□□□□ 0.51
HMGN3-202ENST00000344726 MPHOSPH8Q99549 860 aa18.25■□□□□ 0.51
HMGN3-202ENST00000344726 TLL2Q9Y6L7 1015 aa18.25■□□□□ 0.51
HMGN3-202ENST00000344726 ZNF804BA4D1E1 1349 aa18.24■□□□□ 0.51
HMGN3-202ENST00000344726 CT47B1P0C2W7 299 aaPredicted RBP18.24■□□□□ 0.51
HMGN3-202ENST00000344726 ZNF280AP59817 542 aaPredicted RBP18.24■□□□□ 0.51
HMGN3-202ENST00000344726 IFIT5Q13325 482 aaKnown RBP18.24■□□□□ 0.51
HMGN3-202ENST00000344726 CDC37L1Q7L3B6 337 aa18.24■□□□□ 0.51
HMGN3-202ENST00000344726 PODNQ7Z5L7 613 aa18.24■□□□□ 0.51
HMGN3-202ENST00000344726 ZNF594Q96JF6 807 aaPredicted RBP18.24■□□□□ 0.51
HMGN3-202ENST00000344726 LEMD3Q9Y2U8 911 aa18.24■□□□□ 0.51
HMGN3-202ENST00000344726 WDR33Q9C0J8 1336 aaKnown RBP18.23■□□□□ 0.51
HMGN3-202ENST00000344726 USP17L3A6NCW0 530 aa18.23■□□□□ 0.51
HMGN3-202ENST00000344726 USP17L4A6NCW7 530 aa18.23■□□□□ 0.51
HMGN3-202ENST00000344726 ADM5C9JUS6 153 aa18.23■□□□□ 0.51
HMGN3-202ENST00000344726 FOXN1O15353 648 aa18.23■□□□□ 0.51
HMGN3-202ENST00000344726 TAF5LO75529 589 aa18.23■□□□□ 0.51
HMGN3-202ENST00000344726 DACT2Q5SW24 774 aa18.23■□□□□ 0.51
HMGN3-202ENST00000344726 CYP4F22Q6NT55 531 aa18.23■□□□□ 0.51
HMGN3-202ENST00000344726 USP17L1Q7RTZ2 530 aa18.23■□□□□ 0.51
HMGN3-202ENST00000344726 SAPCD2Q86UD0 394 aa18.23■□□□□ 0.51
HMGN3-202ENST00000344726 AGBL3Q8NEM8 1001 aa18.23■□□□□ 0.51
HMGN3-202ENST00000344726 HELBQ8NG08 1087 aaPredicted RBP18.23■□□□□ 0.51
HMGN3-202ENST00000344726 ZNF408Q9H9D4 720 aa18.23■□□□□ 0.51
HMGN3-202ENST00000344726 ANKRD2Q9GZV1 360 aa18.22■□□□□ 0.51
HMGN3-202ENST00000344726 COA1Q9GZY4 146 aa18.22■□□□□ 0.51
HMGN3-202ENST00000344726 RARSP54136 660 aaKnown RBP18.21■□□□□ 0.51
HMGN3-202ENST00000344726 BRPF1P55201 1214 aaPredicted RBP18.21■□□□□ 0.51
HMGN3-202ENST00000344726 CAPNS2Q96L46 248 aa18.21■□□□□ 0.51
HMGN3-202ENST00000344726 USP44Q9H0E7 712 aa18.21■□□□□ 0.51
HMGN3-202ENST00000344726 BICC1Q9H694 974 aaKnown RBP18.21■□□□□ 0.51
HMGN3-202ENST00000344726 WBP1LQ9NX94 342 aa18.21■□□□□ 0.51
HMGN3-202ENST00000344726 GGA3Q9NZ52 723 aa18.21■□□□□ 0.51
HMGN3-202ENST00000344726 NOB1Q9ULX3 412 aaKnown RBP18.21■□□□□ 0.51
HMGN3-202ENST00000344726 USP17L8P0C7I0 530 aa18.2■□□□□ 0.5
HMGN3-202ENST00000344726 CCDC57Q2TAC2 916 aa18.2■□□□□ 0.5
HMGN3-202ENST00000344726 KRT26Q7Z3Y9 468 aa18.2■□□□□ 0.5
HMGN3-202ENST00000344726 ANKRD44Q8N8A2 993 aa18.2■□□□□ 0.5
HMGN3-202ENST00000344726 HNRNPUQ00839 825 aaKnown RBP eCLIP18.19■□□□□ 0.5
HMGN3-202ENST00000344726 GRM1Q13255 1194 aa18.19■□□□□ 0.5
HMGN3-202ENST00000344726 SCARF1Q14162 830 aa18.19■□□□□ 0.5
HMGN3-202ENST00000344726 RABL6Q3YEC7 729 aaPredicted RBP18.19■□□□□ 0.5
HMGN3-202ENST00000344726 PAXIP1Q6ZW49 1069 aaPredicted RBP18.19■□□□□ 0.5
HMGN3-202ENST00000344726 PUS3Q9BZE2 481 aaKnown RBP18.19■□□□□ 0.5
HMGN3-202ENST00000344726 MYOZ2Q9NPC6 264 aa18.19■□□□□ 0.5
HMGN3-202ENST00000344726 AOC2O75106 756 aa18.18■□□□□ 0.5
HMGN3-202ENST00000344726 STRIP1Q5VSL9 837 aa18.18■□□□□ 0.5
HMGN3-202ENST00000344726 ANGEL2Q5VTE6 544 aaKnown RBP18.18■□□□□ 0.5
HMGN3-202ENST00000344726 LDHAL6AQ6ZMR3 332 aa18.18■□□□□ 0.5
HMGN3-202ENST00000344726 C15orf52Q6ZUT6 534 aaKnown RBP18.18■□□□□ 0.5
HMGN3-202ENST00000344726 FBXW7Q969H0 707 aa18.18■□□□□ 0.5
HMGN3-202ENST00000344726 DCPSQ96C86 337 aaKnown RBP18.18■□□□□ 0.5
HMGN3-202ENST00000344726 SCAF8Q9UPN6 1271 aaKnown RBP18.18■□□□□ 0.5
HMGN3-202ENST00000344726 KCNJ4P48050 445 aa18.17■□□□□ 0.5
HMGN3-202ENST00000344726 TAF7LQ5H9L4 462 aa18.17■□□□□ 0.5
HMGN3-202ENST00000344726 CD209Q9NNX6 404 aa18.17■□□□□ 0.5
HMGN3-202ENST00000344726 CAPN15O75808 1086 aa18.16■□□□□ 0.5
HMGN3-202ENST00000344726 GTF2IP78347 998 aa18.16■□□□□ 0.5
HMGN3-202ENST00000344726 NBPF9Q3BBW0 867 aa18.16■□□□□ 0.5
HMGN3-202ENST00000344726 CERS5Q8N5B7 392 aa18.16■□□□□ 0.5
HMGN3-202ENST00000344726 CNNM1Q9NRU3 951 aa18.16■□□□□ 0.5
HMGN3-202ENST00000344726 PLIN1O60240 522 aa18.15■□□□□ 0.5
HMGN3-202ENST00000344726 TTLL5Q6EMB2 1281 aa18.15■□□□□ 0.5
HMGN3-202ENST00000344726 CDCA5Q96FF9 252 aa18.15■□□□□ 0.5
HMGN3-202ENST00000344726 HHIPL1Q96JK4 782 aa18.15■□□□□ 0.5
HMGN3-202ENST00000344726 ECE1P42892 770 aa18.14■□□□□ 0.49
HMGN3-202ENST00000344726 KIAA0825Q8IV33 1275 aa18.14■□□□□ 0.49
HMGN3-202ENST00000344726 SULF1Q8IWU6 871 aa18.14■□□□□ 0.49
HMGN3-202ENST00000344726 ZIC5Q96T25 663 aa18.14■□□□□ 0.49
HMGN3-202ENST00000344726 API5Q9BZZ5 524 aaKnown RBP18.14■□□□□ 0.49
HMGN3-202ENST00000344726 RIPOR2Q9Y4F9 1068 aa18.14■□□□□ 0.49
HMGN3-202ENST00000344726 MYO3BQ8WXR4 1341 aa18.14■□□□□ 0.49
HMGN3-202ENST00000344726 WNT10BO00744 389 aa18.13■□□□□ 0.49
HMGN3-202ENST00000344726 BCAR3O75815 825 aa18.13■□□□□ 0.49
HMGN3-202ENST00000344726 SASH1O94885 1247 aa18.13■□□□□ 0.49
HMGN3-202ENST00000344726 HSPA8P11142 646 aaKnown RBP18.13■□□□□ 0.49
HMGN3-202ENST00000344726 IL1R1P14778 569 aa18.13■□□□□ 0.49
HMGN3-202ENST00000344726 HUNKP57058 714 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms