RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 CTNNBL1Q8WYA6 563 aaPredicted RBP20.52■□□□□ 0.88
SMC4-201ENST00000344722 SNX14Q9Y5W7 946 aa20.52■□□□□ 0.88
SMC4-201ENST00000344722 LEO1Q8WVC0 666 aaPredicted RBP20.52■□□□□ 0.88
SMC4-201ENST00000344722 ABCF2Q9UG63 623 aa20.52■□□□□ 0.88
SMC4-201ENST00000344722 BRD3Q15059 726 aa20.52■□□□□ 0.87
SMC4-201ENST00000344722 MFSD6Q6ZSS7 791 aa20.52■□□□□ 0.87
SMC4-201ENST00000344722 A0A1B0GVL5 298 aa20.51■□□□□ 0.87
SMC4-201ENST00000344722 DHX32Q7L7V1 743 aaKnown RBP20.51■□□□□ 0.87
SMC4-201ENST00000344722 PUS7Q96PZ0 661 aaKnown RBP20.51■□□□□ 0.87
SMC4-201ENST00000344722 USP5P45974 858 aa20.51■□□□□ 0.87
SMC4-201ENST00000344722 UBXN1Q04323 297 aa20.51■□□□□ 0.87
SMC4-201ENST00000344722 HOOK3Q86VS8 718 aa20.51■□□□□ 0.87
SMC4-201ENST00000344722 SAMD15Q9P1V8 674 aa20.51■□□□□ 0.87
SMC4-201ENST00000344722 STAT6P42226 847 aa20.5■□□□□ 0.87
SMC4-201ENST00000344722 MAP2K2P36507 400 aa20.5■□□□□ 0.87
SMC4-201ENST00000344722 ZNF76P36508 570 aa20.5■□□□□ 0.87
SMC4-201ENST00000344722 LUC7L2Q9Y383 392 aaKnown RBP20.5■□□□□ 0.87
SMC4-201ENST00000344722 RPS6KB1P23443 525 aa20.5■□□□□ 0.87
SMC4-201ENST00000344722 TRIM14Q14142 442 aa20.5■□□□□ 0.87
SMC4-201ENST00000344722 MYCBPQ99417 103 aaPredicted RBP20.5■□□□□ 0.87
SMC4-201ENST00000344722 CPSF2Q9P2I0 782 aaKnown RBP20.5■□□□□ 0.87
SMC4-201ENST00000344722 MSH6P52701 1360 aa20.5■□□□□ 0.87
SMC4-201ENST00000344722 TMEM132AQ24JP5 1023 aa20.49■□□□□ 0.87
SMC4-201ENST00000344722 DHX58Q96C10 678 aa20.49■□□□□ 0.87
SMC4-201ENST00000344722 ZNF215Q9UL58 517 aaPredicted RBP20.49■□□□□ 0.87
SMC4-201ENST00000344722 TEX14Q8IWB6 1497 aa20.49■□□□□ 0.87
SMC4-201ENST00000344722 IDEP14735 1019 aa20.49■□□□□ 0.87
SMC4-201ENST00000344722 APOBRQ0VD83 1088 aa20.49■□□□□ 0.87
SMC4-201ENST00000344722 CCDC122Q5T0U0 273 aa20.49■□□□□ 0.87
SMC4-201ENST00000344722 SPATA24Q86W54 205 aa20.49■□□□□ 0.87
SMC4-201ENST00000344722 TMTC2Q8N394 836 aa20.49■□□□□ 0.87
SMC4-201ENST00000344722 OTUD7AQ8TE49 926 aaPredicted RBP20.49■□□□□ 0.87
SMC4-201ENST00000344722 LLPHQ9BRT6 129 aaKnown RBP20.49■□□□□ 0.87
SMC4-201ENST00000344722 GOLGA5Q8TBA6 731 aa20.49■□□□□ 0.87
SMC4-201ENST00000344722 DESP17661 470 aa20.49■□□□□ 0.87
SMC4-201ENST00000344722 TNNC1P63316 161 aa20.49■□□□□ 0.87
SMC4-201ENST00000344722 LMBR1Q8WVP7 490 aa20.49■□□□□ 0.87
SMC4-201ENST00000344722 KRT23Q9C075 422 aa20.49■□□□□ 0.87
SMC4-201ENST00000344722 IFT81Q8WYA0 676 aa20.48■□□□□ 0.87
SMC4-201ENST00000344722 SELENOSQ9BQE4 189 aa20.48■□□□□ 0.87
SMC4-201ENST00000344722 NLRP12P59046 1061 aa20.48■□□□□ 0.87
SMC4-201ENST00000344722 ZBTB9Q96C00 473 aa20.48■□□□□ 0.87
SMC4-201ENST00000344722 UBA5Q9GZZ9 404 aa20.48■□□□□ 0.87
SMC4-201ENST00000344722 ITSN2Q9NZM3 1697 aa20.48■□□□□ 0.87
SMC4-201ENST00000344722 PRC1O43663 620 aa20.48■□□□□ 0.87
SMC4-201ENST00000344722 STAMBPO95630 424 aa20.48■□□□□ 0.87
SMC4-201ENST00000344722 SLC5A1P13866 664 aa20.48■□□□□ 0.87
SMC4-201ENST00000344722 A0A1W2PRG0 241 aa20.48■□□□□ 0.87
SMC4-201ENST00000344722 CCDC172P0C7W6 258 aa20.48■□□□□ 0.87
SMC4-201ENST00000344722 CLNS1AP54105 237 aaKnown RBP20.48■□□□□ 0.87
SMC4-201ENST00000344722 CEP63Q96MT8 703 aa20.48■□□□□ 0.87
SMC4-201ENST00000344722 WTAPQ15007 396 aa20.47■□□□□ 0.87
SMC4-201ENST00000344722 IGSF22Q8N9C0 903 aa20.47■□□□□ 0.87
SMC4-201ENST00000344722 CARD14Q9BXL6 1004 aa20.47■□□□□ 0.87
SMC4-201ENST00000344722 CPA1P15085 419 aa20.47■□□□□ 0.87
SMC4-201ENST00000344722 PRPHP41219 470 aa20.47■□□□□ 0.87
SMC4-201ENST00000344722 SARNPP82979 210 aaKnown RBP20.47■□□□□ 0.87
SMC4-201ENST00000344722 CETN1Q12798 172 aa20.47■□□□□ 0.87
SMC4-201ENST00000344722 ERCC6LQ2NKX8 1250 aa20.47■□□□□ 0.87
SMC4-201ENST00000344722 TRIM75PA6NK02 468 aa20.47■□□□□ 0.87
SMC4-201ENST00000344722 EFCAB8A8MWE9 144 aa20.47■□□□□ 0.87
SMC4-201ENST00000344722 LACTBP83111 547 aaPredicted RBP20.47■□□□□ 0.87
SMC4-201ENST00000344722 CYP26C1Q6V0L0 522 aa20.47■□□□□ 0.87
SMC4-201ENST00000344722 CNNM2Q9H8M5 875 aa20.47■□□□□ 0.87
SMC4-201ENST00000344722 MKNK2Q9HBH9 465 aa20.47■□□□□ 0.87
SMC4-201ENST00000344722 NBPF7P0C2Y1 421 aaPredicted RBP20.46■□□□□ 0.87
SMC4-201ENST00000344722 RTN1Q16799 776 aa20.46■□□□□ 0.87
SMC4-201ENST00000344722 MPRIPQ6WCQ1 1025 aa20.46■□□□□ 0.87
SMC4-201ENST00000344722 STX17P56962 302 aa20.46■□□□□ 0.87
SMC4-201ENST00000344722 KRI1Q8N9T8 703 aaKnown RBP20.46■□□□□ 0.87
SMC4-201ENST00000344722 CCDC77Q9BR77 488 aa20.46■□□□□ 0.87
SMC4-201ENST00000344722 PEG3Q9GZU2 1588 aa20.46■□□□□ 0.87
SMC4-201ENST00000344722 ZFYVE9O95405 1425 aa20.46■□□□□ 0.87
SMC4-201ENST00000344722 TCERG1LQ5VWI1 586 aa20.45■□□□□ 0.86
SMC4-201ENST00000344722 PLVAPQ9BX97 442 aa20.45■□□□□ 0.86
SMC4-201ENST00000344722 BICDL2A1A5D9 508 aa20.45■□□□□ 0.86
SMC4-201ENST00000344722 GOLGA6BA6NDN3 693 aa20.45■□□□□ 0.86
SMC4-201ENST00000344722 ATP8B1O43520 1251 aa20.45■□□□□ 0.86
SMC4-201ENST00000344722 SPAG5Q96R06 1193 aa20.45■□□□□ 0.86
SMC4-201ENST00000344722 SNRKQ9NRH2 765 aa20.45■□□□□ 0.86
SMC4-201ENST00000344722 SGSM2O43147 1006 aa20.45■□□□□ 0.86
SMC4-201ENST00000344722 USHBP1Q8N6Y0 703 aa20.45■□□□□ 0.86
SMC4-201ENST00000344722 NEK11Q8NG66 645 aa20.45■□□□□ 0.86
SMC4-201ENST00000344722 PPFIA1Q13136 1202 aa20.45■□□□□ 0.86
SMC4-201ENST00000344722 SWAP70Q9UH65 585 aa20.45■□□□□ 0.86
SMC4-201ENST00000344722 MRFAP1L1Q96HT8 127 aa20.44■□□□□ 0.86
SMC4-201ENST00000344722 CEP83Q9Y592 693 aa20.44■□□□□ 0.86
SMC4-201ENST00000344722 DMRT2Q9Y5R5 561 aa20.44■□□□□ 0.86
SMC4-201ENST00000344722 LRRC8AQ8IWT6 810 aa20.44■□□□□ 0.86
SMC4-201ENST00000344722 KIF24Q5T7B8 1368 aa20.44■□□□□ 0.86
SMC4-201ENST00000344722 STRN4Q9NRL3 753 aa20.44■□□□□ 0.86
SMC4-201ENST00000344722 PYCARDQ9ULZ3 195 aa20.44■□□□□ 0.86
SMC4-201ENST00000344722 SSH2Q76I76 1423 aa20.44■□□□□ 0.86
SMC4-201ENST00000344722 ANKRD18BA2A2Z9 1011 aa20.44■□□□□ 0.86
SMC4-201ENST00000344722 CHPF2Q9P2E5 772 aa20.44■□□□□ 0.86
SMC4-201ENST00000344722 UBE3BQ7Z3V4 1068 aa20.43■□□□□ 0.86
SMC4-201ENST00000344722 IFT74Q96LB3 600 aa20.43■□□□□ 0.86
SMC4-201ENST00000344722 SLC27A2O14975 620 aa20.43■□□□□ 0.86
SMC4-201ENST00000344722 CAVIN4Q5BKX8 364 aa20.43■□□□□ 0.86
SMC4-201ENST00000344722 MMRN2Q9H8L6 949 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms