RNA–Protein interactions for RNA: ENST00000343003.10

SPATA13-201, Transcript of spermatogenesis associated 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPATA13, Length 6,405 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA13-201ENST00000343003 HELLSQ9NRZ9 838 aa10.55□□□□□ -0.72
SPATA13-201ENST00000343003 CTNNBL1Q8WYA6 563 aaPredicted RBP10.55□□□□□ -0.72
SPATA13-201ENST00000343003 GOPCQ9HD26 462 aa10.55□□□□□ -0.72
SPATA13-201ENST00000343003 MAP3K19Q56UN5 1328 aa10.55□□□□□ -0.72
SPATA13-201ENST00000343003 CCDC171Q6TFL3 1326 aa10.55□□□□□ -0.72
SPATA13-201ENST00000343003 CALML3P27482 149 aa10.55□□□□□ -0.72
SPATA13-201ENST00000343003 CREB3L3Q68CJ9 461 aa10.55□□□□□ -0.72
SPATA13-201ENST00000343003 PAXIP1Q6ZW49 1069 aaPredicted RBP10.55□□□□□ -0.72
SPATA13-201ENST00000343003 TRMT1Q9NXH9 659 aaKnown RBP10.55□□□□□ -0.72
SPATA13-201ENST00000343003 MYO5CQ9NQX4 1742 aa10.55□□□□□ -0.72
SPATA13-201ENST00000343003 KCNA6P17658 529 aa10.55□□□□□ -0.72
SPATA13-201ENST00000343003 IFFO1Q0D2I5 559 aa10.55□□□□□ -0.72
SPATA13-201ENST00000343003 SNW1Q13573 536 aaKnown RBP10.55□□□□□ -0.72
SPATA13-201ENST00000343003 USP48Q86UV5 1035 aa10.55□□□□□ -0.72
SPATA13-201ENST00000343003 DYDC1Q8WWB3 177 aa10.55□□□□□ -0.72
SPATA13-201ENST00000343003 TBC1D5Q92609 795 aa10.55□□□□□ -0.72
SPATA13-201ENST00000343003 EYA3Q99504 573 aa10.55□□□□□ -0.72
SPATA13-201ENST00000343003 ZBTB40Q9NUA8 1239 aa10.55□□□□□ -0.72
SPATA13-201ENST00000343003 NBPF14Q5TI25 921 aa10.54□□□□□ -0.72
SPATA13-201ENST00000343003 ISM2Q6H9L7 571 aa10.54□□□□□ -0.72
SPATA13-201ENST00000343003 CCDC174Q6PII3 467 aa10.54□□□□□ -0.72
SPATA13-201ENST00000343003 RBM28Q9NW13 759 aaKnown RBP10.54□□□□□ -0.72
SPATA13-201ENST00000343003 CEP170Q5SW79 1584 aa10.54□□□□□ -0.72
SPATA13-201ENST00000343003 SHTN1A0MZ66 631 aa10.54□□□□□ -0.72
SPATA13-201ENST00000343003 USP37Q86T82 979 aa10.54□□□□□ -0.72
SPATA13-201ENST00000343003 PHACTR3Q96KR7 559 aa10.54□□□□□ -0.72
SPATA13-201ENST00000343003 PPFIA3O75145 1194 aa10.54□□□□□ -0.72
SPATA13-201ENST00000343003 RUFY3Q7L099 469 aa10.54□□□□□ -0.72
SPATA13-201ENST00000343003 SMARCC2Q8TAQ2 1214 aa10.54□□□□□ -0.72
SPATA13-201ENST00000343003 LMTK3Q96Q04 1460 aa10.54□□□□□ -0.72
SPATA13-201ENST00000343003 PLBD2Q8NHP8 589 aa10.54□□□□□ -0.72
SPATA13-201ENST00000343003 DDX21Q9NR30 783 aaKnown RBP eCLIP10.54□□□□□ -0.72
SPATA13-201ENST00000343003 ZFYVE16Q7Z3T8 1539 aa10.54□□□□□ -0.72
SPATA13-201ENST00000343003 USP8P40818 1118 aa10.54□□□□□ -0.72
SPATA13-201ENST00000343003 GIMAP6Q6P9H5 292 aa10.54□□□□□ -0.72
SPATA13-201ENST00000343003 GSTTP1A0A1W2PQM5 241 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 N4BP3O15049 544 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 HOXB7P09629 217 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 CTNNA2P26232 953 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 TMX1Q9H3N1 280 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 DENND2AQ9ULE3 1009 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 TMCO5BA8MYB1 307 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 AFMP43652 599 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 SPAG1Q07617 926 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 GTPBP4Q9BZE4 634 aaKnown RBP10.53□□□□□ -0.72
SPATA13-201ENST00000343003 RTL1A6NKG5 1358 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 LDHBP07195 334 aaKnown RBP10.53□□□□□ -0.72
SPATA13-201ENST00000343003 IL13P35225 146 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 UBASH3AP57075 661 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 C8orf34Q49A92 452 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 ANO6Q4KMQ2 910 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 DNA2P51530 1060 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 MAP2K1Q02750 393 aaPredicted RBP10.53□□□□□ -0.72
SPATA13-201ENST00000343003 HOOK3Q86VS8 718 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 PLEKHM2Q8IWE5 1019 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 CCDC113Q9H0I3 377 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 ARHGEF10O15013 1369 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 ARHGEF5Q12774 1597 aa10.53□□□□□ -0.72
SPATA13-201ENST00000343003 C16orf45Q96MC5 204 aaPredicted RBP10.53□□□□□ -0.72
SPATA13-201ENST00000343003 NOP2P46087 812 aaKnown RBP10.52□□□□□ -0.73
SPATA13-201ENST00000343003 PARP10Q53GL7 1025 aa10.52□□□□□ -0.73
SPATA13-201ENST00000343003 METTL22Q9BUU2 404 aaPredicted RBP10.52□□□□□ -0.73
SPATA13-201ENST00000343003 ZC3H12CQ9C0D7 883 aaKnown RBP10.52□□□□□ -0.73
SPATA13-201ENST00000343003 AOX1Q06278 1338 aa10.52□□□□□ -0.73
SPATA13-201ENST00000343003 TRIM75PA6NK02 468 aa10.52□□□□□ -0.73
SPATA13-201ENST00000343003 RRP9O43818 475 aaKnown RBP10.52□□□□□ -0.73
SPATA13-201ENST00000343003 KRT13P13646 458 aa10.52□□□□□ -0.73
SPATA13-201ENST00000343003 AK2P54819 239 aa10.52□□□□□ -0.73
SPATA13-201ENST00000343003 TCEANC2Q96MN5 208 aa10.52□□□□□ -0.73
SPATA13-201ENST00000343003 MCM9Q9NXL9 1143 aa10.52□□□□□ -0.73
SPATA13-201ENST00000343003 CHMLP26374 656 aa10.52□□□□□ -0.73
SPATA13-201ENST00000343003 CEP135Q66GS9 1140 aa10.52□□□□□ -0.73
SPATA13-201ENST00000343003 DHX32Q7L7V1 743 aaKnown RBP10.52□□□□□ -0.73
SPATA13-201ENST00000343003 BRAPQ7Z569 592 aa10.52□□□□□ -0.73
SPATA13-201ENST00000343003 BTG4Q9NY30 223 aa10.52□□□□□ -0.73
SPATA13-201ENST00000343003 TFCP2L1Q9NZI6 479 aa10.52□□□□□ -0.73
SPATA13-201ENST00000343003 NAP1L4Q99733 375 aaKnown RBP10.52□□□□□ -0.73
SPATA13-201ENST00000343003 TNNQ9UQP3 1299 aa10.52□□□□□ -0.73
SPATA13-201ENST00000343003 PAXBP1Q9Y5B6 917 aa10.52□□□□□ -0.73
SPATA13-201ENST00000343003 RLBP1P12271 317 aa10.51□□□□□ -0.73
SPATA13-201ENST00000343003 CYLC1P35663 651 aaPredicted RBP10.51□□□□□ -0.73
SPATA13-201ENST00000343003 APOBRQ0VD83 1088 aa10.51□□□□□ -0.73
SPATA13-201ENST00000343003 KRT24Q2M2I5 525 aa10.51□□□□□ -0.73
SPATA13-201ENST00000343003 TRAPPC3LQ5T215 181 aa10.51□□□□□ -0.73
SPATA13-201ENST00000343003 B4DLN1 442 aa10.51□□□□□ -0.73
SPATA13-201ENST00000343003 PSMA7O14818 248 aa10.51□□□□□ -0.73
SPATA13-201ENST00000343003 SPTLC2O15270 562 aa10.51□□□□□ -0.73
SPATA13-201ENST00000343003 MYCNP04198 464 aaPredicted RBP10.51□□□□□ -0.73
SPATA13-201ENST00000343003 POLD1P28340 1107 aa10.51□□□□□ -0.73
SPATA13-201ENST00000343003 MRPL12P52815 198 aaKnown RBP10.51□□□□□ -0.73
SPATA13-201ENST00000343003 MIGA1Q8NAN2 632 aa10.51□□□□□ -0.73
SPATA13-201ENST00000343003 SMC5Q8IY18 1101 aa10.51□□□□□ -0.73
SPATA13-201ENST00000343003 PUF60Q9UHX1 559 aaKnown RBP10.51□□□□□ -0.73
SPATA13-201ENST00000343003 SPDYE3A6NKU9 549 aa10.51□□□□□ -0.73
SPATA13-201ENST00000343003 HCLS1P14317 486 aaPredicted RBP10.51□□□□□ -0.73
SPATA13-201ENST00000343003 CKAP4Q07065 602 aaKnown RBP10.51□□□□□ -0.73
SPATA13-201ENST00000343003 ZNF790Q6PG37 636 aa10.51□□□□□ -0.73
SPATA13-201ENST00000343003 FERMT1Q9BQL6 677 aa10.51□□□□□ -0.73
SPATA13-201ENST00000343003 TTC12Q9H892 705 aaPredicted RBP10.51□□□□□ -0.73
SPATA13-201ENST00000343003 NEO1Q92859 1461 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms