RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 CEP57L1Q8IYX8 460 aa14.65□□□□□ -0.06
LMX1A-202ENST00000342310 ZNF396Q96N95 335 aaPredicted RBP14.65□□□□□ -0.06
LMX1A-202ENST00000342310 DLG5Q8TDM6 1919 aa14.64□□□□□ -0.07
LMX1A-202ENST00000342310 NEURL4Q96JN8 1562 aa14.64□□□□□ -0.07
LMX1A-202ENST00000342310 KIF6Q6ZMV9 814 aa14.64□□□□□ -0.07
LMX1A-202ENST00000342310 KBTBD3Q8NAB2 608 aa14.64□□□□□ -0.07
LMX1A-202ENST00000342310 BCL2L12Q9HB09 334 aa14.64□□□□□ -0.07
LMX1A-202ENST00000342310 HSPD1P10809 573 aaKnown RBP14.64□□□□□ -0.07
LMX1A-202ENST00000342310 CFAP100Q494V2 611 aa14.64□□□□□ -0.07
LMX1A-202ENST00000342310 ZCRB1Q8TBF4 217 aaKnown RBP14.64□□□□□ -0.07
LMX1A-202ENST00000342310 GOLGB1Q14789 3259 aaKnown RBP14.64□□□□□ -0.07
LMX1A-202ENST00000342310 HOXB7P09629 217 aa14.63□□□□□ -0.07
LMX1A-202ENST00000342310 MCM5P33992 734 aa14.63□□□□□ -0.07
LMX1A-202ENST00000342310 PDIA6Q15084 440 aa14.63□□□□□ -0.07
LMX1A-202ENST00000342310 DNAJC10Q8IXB1 793 aa14.63□□□□□ -0.07
LMX1A-202ENST00000342310 CPLX3Q8WVH0 158 aa14.63□□□□□ -0.07
LMX1A-202ENST00000342310 ACSBG1Q96GR2 724 aa14.63□□□□□ -0.07
LMX1A-202ENST00000342310 ZSWIM4Q9H7M6 989 aa14.63□□□□□ -0.07
LMX1A-202ENST00000342310 TMOD3Q9NYL9 352 aa14.63□□□□□ -0.07
LMX1A-202ENST00000342310 B4E1Z4 1266 aa14.63□□□□□ -0.07
LMX1A-202ENST00000342310 HMG20BQ9P0W2 317 aa14.63□□□□□ -0.07
LMX1A-202ENST00000342310 NRDCO43847 1150 aa14.63□□□□□ -0.07
LMX1A-202ENST00000342310 RASSF8Q8NHQ8 419 aa14.63□□□□□ -0.07
LMX1A-202ENST00000342310 OSBP2Q969R2 916 aa14.63□□□□□ -0.07
LMX1A-202ENST00000342310 AIDAQ96BJ3 306 aa14.63□□□□□ -0.07
LMX1A-202ENST00000342310 KCNF1Q9H3M0 494 aa14.63□□□□□ -0.07
LMX1A-202ENST00000342310 CGNQ9P2M7 1197 aaKnown RBP14.63□□□□□ -0.07
LMX1A-202ENST00000342310 ATP5JP18859 108 aa14.62□□□□□ -0.07
LMX1A-202ENST00000342310 CACTINQ8WUQ7 758 aaKnown RBP14.62□□□□□ -0.07
LMX1A-202ENST00000342310 XAGE2Q96GT9 111 aa14.62□□□□□ -0.07
LMX1A-202ENST00000342310 SCARF1Q14162 830 aa14.62□□□□□ -0.07
LMX1A-202ENST00000342310 PTPN14Q15678 1187 aa14.62□□□□□ -0.07
LMX1A-202ENST00000342310 DCAF5Q96JK2 942 aa14.62□□□□□ -0.07
LMX1A-202ENST00000342310 TM6SF1Q9BZW5 370 aa14.62□□□□□ -0.07
LMX1A-202ENST00000342310 NRKQ7Z2Y5 1582 aa14.62□□□□□ -0.07
LMX1A-202ENST00000342310 SSH2Q76I76 1423 aa14.62□□□□□ -0.07
LMX1A-202ENST00000342310 CPLX2Q6PUV4 134 aaKnown RBP14.62□□□□□ -0.07
LMX1A-202ENST00000342310 IFNKQ9P0W0 207 aa14.62□□□□□ -0.07
LMX1A-202ENST00000342310 CCDC69A6NI79 296 aa14.61□□□□□ -0.07
LMX1A-202ENST00000342310 M0R2C6 588 aa14.61□□□□□ -0.07
LMX1A-202ENST00000342310 ADAMTS2O95450 1211 aa14.61□□□□□ -0.07
LMX1A-202ENST00000342310 TDO2P48775 406 aa14.61□□□□□ -0.07
LMX1A-202ENST00000342310 KCNQ4P56696 695 aa14.61□□□□□ -0.07
LMX1A-202ENST00000342310 SLC26A6Q9BXS9 759 aa14.61□□□□□ -0.07
LMX1A-202ENST00000342310 C19orf44Q9H6X5 657 aa14.61□□□□□ -0.07
LMX1A-202ENST00000342310 ASAP1Q9ULH1 1129 aa14.61□□□□□ -0.07
LMX1A-202ENST00000342310 CLIC4Q9Y696 253 aa14.61□□□□□ -0.07
LMX1A-202ENST00000342310 CCDC144BQ3MJ40 725 aa14.61□□□□□ -0.07
LMX1A-202ENST00000342310 VPS37DQ86XT2 251 aa14.61□□□□□ -0.07
LMX1A-202ENST00000342310 EYA2O00167 538 aa14.61□□□□□ -0.07
LMX1A-202ENST00000342310 RNF113AO15541 343 aaKnown RBP14.61□□□□□ -0.07
LMX1A-202ENST00000342310 SLC3A2P08195 630 aaKnown RBP14.61□□□□□ -0.07
LMX1A-202ENST00000342310 ZNF75DP51815 510 aa14.61□□□□□ -0.07
LMX1A-202ENST00000342310 ATP2B3Q16720 1220 aa14.61□□□□□ -0.07
LMX1A-202ENST00000342310 MPHOSPH8Q99549 860 aa14.61□□□□□ -0.07
LMX1A-202ENST00000342310 CLSTN2Q9H4D0 955 aa14.61□□□□□ -0.07
LMX1A-202ENST00000342310 NUTM2BA6NNL0 878 aaPredicted RBP14.6□□□□□ -0.07
LMX1A-202ENST00000342310 NUTM2EB1AL46 878 aaPredicted RBP14.6□□□□□ -0.07
LMX1A-202ENST00000342310 NBPF26B4DH59 902 aa14.6□□□□□ -0.07
LMX1A-202ENST00000342310 UBE2Q2LH0YL09 131 aa14.6□□□□□ -0.07
LMX1A-202ENST00000342310 FGAP02671 866 aa14.6□□□□□ -0.07
LMX1A-202ENST00000342310 TPM4P67936 248 aa14.6□□□□□ -0.07
LMX1A-202ENST00000342310 NBPF14Q5TI25 921 aa14.6□□□□□ -0.07
LMX1A-202ENST00000342310 NBPF10Q6P3W6 841 aaKnown RBP14.6□□□□□ -0.07
LMX1A-202ENST00000342310 NUTM2AQ8IVF1 878 aaPredicted RBP14.6□□□□□ -0.07
LMX1A-202ENST00000342310 NBPF15Q8N660 670 aa14.6□□□□□ -0.07
LMX1A-202ENST00000342310 MYRIPQ8NFW9 859 aa14.6□□□□□ -0.07
LMX1A-202ENST00000342310 PUS7LQ9H0K6 701 aaKnown RBP14.6□□□□□ -0.07
LMX1A-202ENST00000342310 BABAM1Q9NWV8 329 aa14.6□□□□□ -0.07
LMX1A-202ENST00000342310 COBLO75128 1261 aa14.6□□□□□ -0.07
LMX1A-202ENST00000342310 CLIC6Q96NY7 704 aa14.6□□□□□ -0.07
LMX1A-202ENST00000342310 IFIT3O14879 490 aaKnown RBP14.59□□□□□ -0.07
LMX1A-202ENST00000342310 PRDM1O75626 825 aa14.59□□□□□ -0.07
LMX1A-202ENST00000342310 IL15P40933 162 aaPredicted RBP14.59□□□□□ -0.07
LMX1A-202ENST00000342310 NSUN7Q8NE18 718 aaKnown RBP14.59□□□□□ -0.07
LMX1A-202ENST00000342310 PLBD2Q8NHP8 589 aa14.59□□□□□ -0.07
LMX1A-202ENST00000342310 LRP2BPQ9P2M1 347 aa14.59□□□□□ -0.07
LMX1A-202ENST00000342310 USP27XA6NNY8 438 aa14.59□□□□□ -0.07
LMX1A-202ENST00000342310 GPAA1O43292 621 aa14.59□□□□□ -0.07
LMX1A-202ENST00000342310 SKIDA1Q1XH10 827 aa14.59□□□□□ -0.07
LMX1A-202ENST00000342310 ZSCAN25Q6NSZ9 544 aa14.59□□□□□ -0.07
LMX1A-202ENST00000342310 ZFP91Q96JP5 570 aaPredicted RBP14.59□□□□□ -0.07
LMX1A-202ENST00000342310 ALG1Q9BT22 464 aa14.59□□□□□ -0.07
LMX1A-202ENST00000342310 GOLPH3LQ9H4A5 285 aa14.59□□□□□ -0.07
LMX1A-202ENST00000342310 PXDNQ92626 1479 aa14.59□□□□□ -0.07
LMX1A-202ENST00000342310 NDUFA8P51970 172 aa14.59□□□□□ -0.07
LMX1A-202ENST00000342310 CTDSPL2Q05D32 466 aa14.59□□□□□ -0.07
LMX1A-202ENST00000342310 STX1AQ16623 288 aa14.59□□□□□ -0.07
LMX1A-202ENST00000342310 ZNF827Q17R98 1081 aa14.59□□□□□ -0.07
LMX1A-202ENST00000342310 STAMQ92783 540 aa14.59□□□□□ -0.07
LMX1A-202ENST00000342310 NAT10Q9H0A0 1025 aaKnown RBP14.59□□□□□ -0.07
LMX1A-202ENST00000342310 ANO10Q9NW15 660 aa14.59□□□□□ -0.07
LMX1A-202ENST00000342310 MAST3O60307 1309 aa14.59□□□□□ -0.07
LMX1A-202ENST00000342310 METAP2P50579 478 aaKnown RBP eCLIP14.58□□□□□ -0.07
LMX1A-202ENST00000342310 CEP135Q66GS9 1140 aa14.58□□□□□ -0.07
LMX1A-202ENST00000342310 KIAA1524Q8TCG1 905 aa14.58□□□□□ -0.07
LMX1A-202ENST00000342310 COPRSQ9NQ92 184 aa14.58□□□□□ -0.07
LMX1A-202ENST00000342310 PDIA3P30101 505 aaKnown RBP14.58□□□□□ -0.08
LMX1A-202ENST00000342310 AKAP17AQ02040 695 aaKnown RBP14.58□□□□□ -0.08
LMX1A-202ENST00000342310 SMIM5Q71RC9 77 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms