RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 ADCK5Q3MIX3 580 aa15.56■□□□□ 0.08
COL18A1-201ENST00000342220 PAXIP1Q6ZW49 1069 aaPredicted RBP15.56■□□□□ 0.08
COL18A1-201ENST00000342220 TAF6LQ9Y6J9 622 aa15.56■□□□□ 0.08
COL18A1-201ENST00000342220 MIGA1Q8NAN2 632 aa15.55■□□□□ 0.08
COL18A1-201ENST00000342220 LRP2BPQ9P2M1 347 aa15.55■□□□□ 0.08
COL18A1-201ENST00000342220 COL14A1Q05707 1796 aaKnown RBP15.55■□□□□ 0.08
COL18A1-201ENST00000342220 SLC9C2Q5TAH2 1124 aa15.55■□□□□ 0.08
COL18A1-201ENST00000342220 PAPPAQ13219 1627 aa15.55■□□□□ 0.08
COL18A1-201ENST00000342220 RPS6KA4O75676 772 aa15.55■□□□□ 0.08
COL18A1-201ENST00000342220 TTLL5Q6EMB2 1281 aa15.55■□□□□ 0.08
COL18A1-201ENST00000342220 SMAP1Q8IYB5 467 aaPredicted RBP15.55■□□□□ 0.08
COL18A1-201ENST00000342220 NECAB1Q8N987 351 aa15.55■□□□□ 0.08
COL18A1-201ENST00000342220 CNBD1Q8NA66 436 aa15.54■□□□□ 0.08
COL18A1-201ENST00000342220 LMBRD1Q9NUN5 540 aa15.54■□□□□ 0.08
COL18A1-201ENST00000342220 RAI14Q9P0K7 980 aa15.54■□□□□ 0.08
COL18A1-201ENST00000342220 NSFL1CQ9UNZ2 370 aaKnown RBP15.54■□□□□ 0.08
COL18A1-201ENST00000342220 TXNRD1Q16881 649 aa15.54■□□□□ 0.08
COL18A1-201ENST00000342220 PARP10Q53GL7 1025 aa15.54■□□□□ 0.08
COL18A1-201ENST00000342220 CAVIN1Q6NZI2 390 aaKnown RBP15.54■□□□□ 0.08
COL18A1-201ENST00000342220 ATP5JP18859 108 aa15.53■□□□□ 0.08
COL18A1-201ENST00000342220 NASPP49321 788 aaPredicted RBP15.53■□□□□ 0.08
COL18A1-201ENST00000342220 CHRNDQ07001 517 aa15.53■□□□□ 0.08
COL18A1-201ENST00000342220 COL9A3Q14050 684 aaPredicted RBP15.53■□□□□ 0.08
COL18A1-201ENST00000342220 A0A0G2JLW4 131 aa15.53■□□□□ 0.08
COL18A1-201ENST00000342220 RRP12Q5JTH9 1297 aaKnown RBP15.53■□□□□ 0.08
COL18A1-201ENST00000342220 CDC5LQ99459 802 aaKnown RBP15.53■□□□□ 0.08
COL18A1-201ENST00000342220 PDE8BO95263 885 aa15.53■□□□□ 0.08
COL18A1-201ENST00000342220 TRIM28Q13263 835 aaKnown RBP15.53■□□□□ 0.08
COL18A1-201ENST00000342220 CCDC102BQ68D86 513 aa15.53■□□□□ 0.08
COL18A1-201ENST00000342220 CWC22Q9HCG8 908 aaKnown RBP15.53■□□□□ 0.08
COL18A1-201ENST00000342220 ZDHHC9Q9Y397 364 aa15.53■□□□□ 0.08
COL18A1-201ENST00000342220 GLI3P10071 1580 aa15.53■□□□□ 0.08
COL18A1-201ENST00000342220 SLC5A1P13866 664 aa15.52■□□□□ 0.08
COL18A1-201ENST00000342220 NFIXQ14938 502 aa15.52■□□□□ 0.08
COL18A1-201ENST00000342220 NTSR2O95665 410 aa15.52■□□□□ 0.07
COL18A1-201ENST00000342220 EN1Q05925 392 aaPredicted RBP15.52■□□□□ 0.07
COL18A1-201ENST00000342220 SNX14Q9Y5W7 946 aa15.52■□□□□ 0.07
COL18A1-201ENST00000342220 CCDC83Q8IWF9 413 aa15.52■□□□□ 0.07
COL18A1-201ENST00000342220 RPGRQ92834 1020 aaKnown RBP15.52■□□□□ 0.07
COL18A1-201ENST00000342220 PRPF40AO75400 957 aaKnown RBP15.51■□□□□ 0.07
COL18A1-201ENST00000342220 RBM6P78332 1123 aaKnown RBP15.51■□□□□ 0.07
COL18A1-201ENST00000342220 MAP7D2Q96T17 732 aa15.51■□□□□ 0.07
COL18A1-201ENST00000342220 NARFQ9UHQ1 456 aa15.51■□□□□ 0.07
COL18A1-201ENST00000342220 CCDC171Q6TFL3 1326 aa15.51■□□□□ 0.07
COL18A1-201ENST00000342220 MCAMP43121 646 aa15.51■□□□□ 0.07
COL18A1-201ENST00000342220 TMX3Q96JJ7 454 aa15.51■□□□□ 0.07
COL18A1-201ENST00000342220 RIPOR2Q9Y4F9 1068 aa15.51■□□□□ 0.07
COL18A1-201ENST00000342220 ZSCAN23Q3MJ62 389 aa15.5■□□□□ 0.07
COL18A1-201ENST00000342220 CREB3L3Q68CJ9 461 aa15.5■□□□□ 0.07
COL18A1-201ENST00000342220 KBTBD3Q8NAB2 608 aa15.5■□□□□ 0.07
COL18A1-201ENST00000342220 ZNF622Q969S3 477 aaKnown RBP eCLIP15.5■□□□□ 0.07
COL18A1-201ENST00000342220 LSG1Q9H089 658 aaKnown RBP15.5■□□□□ 0.07
COL18A1-201ENST00000342220 BCL2L12Q9HB09 334 aa15.5■□□□□ 0.07
COL18A1-201ENST00000342220 UBR2Q8IWV8 1755 aa15.5■□□□□ 0.07
COL18A1-201ENST00000342220 RIMBP2O15034 1052 aa15.5■□□□□ 0.07
COL18A1-201ENST00000342220 HAUS7Q99871 368 aa15.5■□□□□ 0.07
COL18A1-201ENST00000342220 PDRG1Q9NUG6 133 aa15.5■□□□□ 0.07
COL18A1-201ENST00000342220 R3HCC1Q9Y3T6 440 aaKnown RBP15.5■□□□□ 0.07
COL18A1-201ENST00000342220 C6orf229H3BNL8 230 aa15.5■□□□□ 0.07
COL18A1-201ENST00000342220 CSF1RP07333 972 aa15.5■□□□□ 0.07
COL18A1-201ENST00000342220 KLRK1P26718 216 aa15.5■□□□□ 0.07
COL18A1-201ENST00000342220 DEFB132Q7Z7B7 95 aa15.5■□□□□ 0.07
COL18A1-201ENST00000342220 MAGEB6Q8N7X4 407 aa15.5■□□□□ 0.07
COL18A1-201ENST00000342220 RBM27Q9P2N5 1060 aaKnown RBP15.5■□□□□ 0.07
COL18A1-201ENST00000342220 MTMR7Q9Y216 660 aa15.5■□□□□ 0.07
COL18A1-201ENST00000342220 RPS8P62241 208 aaKnown RBP15.49■□□□□ 0.07
COL18A1-201ENST00000342220 CCDC173Q0VFZ6 552 aa15.49■□□□□ 0.07
COL18A1-201ENST00000342220 MCMDC2Q4G0Z9 681 aa15.49■□□□□ 0.07
COL18A1-201ENST00000342220 PLCD3Q8N3E9 789 aa15.49■□□□□ 0.07
COL18A1-201ENST00000342220 CYP46A1Q9Y6A2 500 aa15.49■□□□□ 0.07
COL18A1-201ENST00000342220 HIP1O00291 1037 aa15.49■□□□□ 0.07
COL18A1-201ENST00000342220 PUM3Q15397 648 aaKnown RBP15.49■□□□□ 0.07
COL18A1-201ENST00000342220 RNF20Q5VTR2 975 aa15.49■□□□□ 0.07
COL18A1-201ENST00000342220 ZNF772Q68DY9 489 aaPredicted RBP15.49■□□□□ 0.07
COL18A1-201ENST00000342220 BLOC1S2Q6QNY1 142 aa15.49■□□□□ 0.07
COL18A1-201ENST00000342220 VGLL3A8MV65 326 aa15.49■□□□□ 0.07
COL18A1-201ENST00000342220 G3V3G9 751 aa15.49■□□□□ 0.07
COL18A1-201ENST00000342220 AK2P54819 239 aa15.49■□□□□ 0.07
COL18A1-201ENST00000342220 ZNF445P59923 1031 aa15.49■□□□□ 0.07
COL18A1-201ENST00000342220 DCAF8Q5TAQ9 597 aa15.49■□□□□ 0.07
COL18A1-201ENST00000342220 GPT2Q8TD30 523 aa15.49■□□□□ 0.07
COL18A1-201ENST00000342220 DDX11Q96FC9 970 aa15.49■□□□□ 0.07
COL18A1-201ENST00000342220 RAD50Q92878 1312 aa15.48■□□□□ 0.07
COL18A1-201ENST00000342220 VPS37CA5D8V6 355 aaPredicted RBP15.48■□□□□ 0.07
COL18A1-201ENST00000342220 OLFM4Q6UX06 510 aa15.48■□□□□ 0.07
COL18A1-201ENST00000342220 OSBP2Q969R2 916 aa15.48■□□□□ 0.07
COL18A1-201ENST00000342220 AIDAQ96BJ3 306 aa15.48■□□□□ 0.07
COL18A1-201ENST00000342220 PPP1R9BQ96SB3 815 aa15.48■□□□□ 0.07
COL18A1-201ENST00000342220 ANP32BQ92688 251 aaKnown RBP15.48■□□□□ 0.07
COL18A1-201ENST00000342220 PUS7LQ9H0K6 701 aaKnown RBP15.48■□□□□ 0.07
COL18A1-201ENST00000342220 LAMB4A4D0S4 1761 aa15.48■□□□□ 0.07
COL18A1-201ENST00000342220 F8W031 263 aaPredicted RBP15.47■□□□□ 0.07
COL18A1-201ENST00000342220 SERPINB2P05120 415 aa15.47■□□□□ 0.07
COL18A1-201ENST00000342220 NRAPQ86VF7 1730 aa15.47■□□□□ 0.07
COL18A1-201ENST00000342220 AOX1Q06278 1338 aa15.47■□□□□ 0.07
COL18A1-201ENST00000342220 MINDY4BA8MYZ0 360 aa15.47■□□□□ 0.07
COL18A1-201ENST00000342220 POTEAQ6S8J7 498 aa15.47■□□□□ 0.07
COL18A1-201ENST00000342220 PIH1D3Q9NQM4 214 aaKnown RBP15.47■□□□□ 0.07
COL18A1-201ENST00000342220 M0R2C6 588 aa15.47■□□□□ 0.07
COL18A1-201ENST00000342220 SLC27A2O14975 620 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms