RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 MCAMP43121 646 aa16.94■□□□□ 0.3
PMS1-201ENST00000342075 FKBP4Q02790 459 aaKnown RBP eCLIP16.94■□□□□ 0.3
PMS1-201ENST00000342075 TTC39AQ5SRH9 613 aa16.94■□□□□ 0.3
PMS1-201ENST00000342075 MFAP1P55081 439 aaKnown RBP16.93■□□□□ 0.3
PMS1-201ENST00000342075 GOLIM4O00461 696 aa16.93■□□□□ 0.3
PMS1-201ENST00000342075 MASTLQ96GX5 879 aa16.93■□□□□ 0.3
PMS1-201ENST00000342075 JAG2Q9Y219 1238 aa16.93■□□□□ 0.3
PMS1-201ENST00000342075 H0YIN7 160 aa16.92■□□□□ 0.3
PMS1-201ENST00000342075 IFIT1P09914 478 aaKnown RBP16.92■□□□□ 0.3
PMS1-201ENST00000342075 SLC5A1P13866 664 aa16.92■□□□□ 0.3
PMS1-201ENST00000342075 CRAMP1Q96RY5 1269 aa16.92■□□□□ 0.3
PMS1-201ENST00000342075 PTGER2P43116 358 aa16.92■□□□□ 0.3
PMS1-201ENST00000342075 ZAP70P43403 619 aa16.92■□□□□ 0.3
PMS1-201ENST00000342075 KCNJ4P48050 445 aa16.92■□□□□ 0.3
PMS1-201ENST00000342075 PRPF40BQ6NWY9 871 aaKnown RBP16.92■□□□□ 0.3
PMS1-201ENST00000342075 CDC45O75419 566 aa16.91■□□□□ 0.3
PMS1-201ENST00000342075 DPEP1P16444 411 aa16.91■□□□□ 0.3
PMS1-201ENST00000342075 CCDC158Q5M9N0 1113 aa16.91■□□□□ 0.3
PMS1-201ENST00000342075 SGIP1Q9BQI5 828 aa16.91■□□□□ 0.3
PMS1-201ENST00000342075 ZNF804BA4D1E1 1349 aa16.91■□□□□ 0.3
PMS1-201ENST00000342075 RASGRF1Q13972 1273 aa16.91■□□□□ 0.3
PMS1-201ENST00000342075 HAUS7Q99871 368 aa16.91■□□□□ 0.3
PMS1-201ENST00000342075 POLLQ9UGP5 575 aa16.91■□□□□ 0.3
PMS1-201ENST00000342075 COL1A1P02452 1464 aaPredicted RBP16.9■□□□□ 0.3
PMS1-201ENST00000342075 LRRC37AA6NMS7 1700 aa16.9■□□□□ 0.3
PMS1-201ENST00000342075 UFL1O94874 794 aa16.9■□□□□ 0.3
PMS1-201ENST00000342075 KCNA3P22001 575 aa16.9■□□□□ 0.3
PMS1-201ENST00000342075 CNTROBQ8N137 903 aa16.9■□□□□ 0.3
PMS1-201ENST00000342075 FAM84BQ96KN1 310 aaPredicted RBP16.9■□□□□ 0.3
PMS1-201ENST00000342075 BBOX1O75936 387 aa16.89■□□□□ 0.29
PMS1-201ENST00000342075 CHMLP26374 656 aa16.89■□□□□ 0.29
PMS1-201ENST00000342075 FSD1Q9BTV5 496 aa16.89■□□□□ 0.29
PMS1-201ENST00000342075 RBM19Q9Y4C8 960 aaKnown RBP16.89■□□□□ 0.29
PMS1-201ENST00000342075 LTBP1Q14766 1721 aa16.89■□□□□ 0.29
PMS1-201ENST00000342075 POLD1P28340 1107 aa16.89■□□□□ 0.29
PMS1-201ENST00000342075 FAM227BQ96M60 508 aa16.89■□□□□ 0.29
PMS1-201ENST00000342075 PAG1Q9NWQ8 432 aa16.89■□□□□ 0.29
PMS1-201ENST00000342075 DUOX1Q9NRD9 1551 aa16.89■□□□□ 0.29
PMS1-201ENST00000342075 UBE4AQ14139 1066 aa16.88■□□□□ 0.29
PMS1-201ENST00000342075 CWC27Q6UX04 472 aaKnown RBP16.88■□□□□ 0.29
PMS1-201ENST00000342075 HMG20BQ9P0W2 317 aa16.88■□□□□ 0.29
PMS1-201ENST00000342075 ATP6V0A2Q9Y487 856 aa16.88■□□□□ 0.29
PMS1-201ENST00000342075 XDHP47989 1333 aa16.88■□□□□ 0.29
PMS1-201ENST00000342075 IRS2Q9Y4H2 1338 aa16.88■□□□□ 0.29
PMS1-201ENST00000342075 KIAA1551Q9HCM1 1747 aa16.88■□□□□ 0.29
PMS1-201ENST00000342075 ANKRD2Q9GZV1 360 aa16.88■□□□□ 0.29
PMS1-201ENST00000342075 KIF13BQ9NQT8 1826 aa16.88■□□□□ 0.29
PMS1-201ENST00000342075 CYP2E1P05181 493 aaPredicted RBP16.88■□□□□ 0.29
PMS1-201ENST00000342075 TBC1D16Q8TBP0 767 aa16.87■□□□□ 0.29
PMS1-201ENST00000342075 EVI5LQ96CN4 794 aa16.87■□□□□ 0.29
PMS1-201ENST00000342075 C6orf229H3BNL8 230 aa16.87■□□□□ 0.29
PMS1-201ENST00000342075 RIMBP2O15034 1052 aa16.87■□□□□ 0.29
PMS1-201ENST00000342075 C21orf2O43822 256 aa16.87■□□□□ 0.29
PMS1-201ENST00000342075 ARID4AP29374 1257 aaPredicted RBP16.87■□□□□ 0.29
PMS1-201ENST00000342075 ALDH1B1P30837 517 aa16.87■□□□□ 0.29
PMS1-201ENST00000342075 SEC62Q99442 399 aaKnown RBP16.87■□□□□ 0.29
PMS1-201ENST00000342075 DLEC1Q9Y238 1755 aa16.87■□□□□ 0.29
PMS1-201ENST00000342075 PIH1D3Q9NQM4 214 aaKnown RBP16.86■□□□□ 0.29
PMS1-201ENST00000342075 A0A0D9SFI3 127 aa16.86■□□□□ 0.29
PMS1-201ENST00000342075 STYK1Q6J9G0 422 aa16.86■□□□□ 0.29
PMS1-201ENST00000342075 VPS37DQ86XT2 251 aa16.86■□□□□ 0.29
PMS1-201ENST00000342075 SP8Q8IXZ3 490 aa16.86■□□□□ 0.29
PMS1-201ENST00000342075 NLGN2Q8NFZ4 835 aa16.86■□□□□ 0.29
PMS1-201ENST00000342075 SPATA5Q8NB90 893 aa16.86■□□□□ 0.29
PMS1-201ENST00000342075 GGA1Q9UJY5 639 aa16.86■□□□□ 0.29
PMS1-201ENST00000342075 NMIQ13287 307 aaPredicted RBP16.85■□□□□ 0.29
PMS1-201ENST00000342075 CHD4Q14839 1912 aa16.85■□□□□ 0.29
PMS1-201ENST00000342075 MYH13Q9UKX3 1938 aa16.85■□□□□ 0.29
PMS1-201ENST00000342075 CCDC129Q6ZRS4 1044 aa16.84■□□□□ 0.29
PMS1-201ENST00000342075 ESYT1Q9BSJ8 1104 aa16.84■□□□□ 0.29
PMS1-201ENST00000342075 CAVIN4Q5BKX8 364 aa16.84■□□□□ 0.29
PMS1-201ENST00000342075 C7orf43Q8WVR3 580 aa16.84■□□□□ 0.29
PMS1-201ENST00000342075 HIBADHP31937 336 aaKnown RBP16.83■□□□□ 0.29
PMS1-201ENST00000342075 CHAF1AQ13111 956 aaPredicted RBP16.83■□□□□ 0.29
PMS1-201ENST00000342075 DPP8Q6V1X1 898 aaPredicted RBP16.83■□□□□ 0.29
PMS1-201ENST00000342075 FBXO33Q7Z6M2 555 aa16.83■□□□□ 0.29
PMS1-201ENST00000342075 MPNDQ8N594 471 aa16.83■□□□□ 0.29
PMS1-201ENST00000342075 KBTBD3Q8NAB2 608 aa16.83■□□□□ 0.29
PMS1-201ENST00000342075 DIAPH3Q9NSV4 1193 aa16.83■□□□□ 0.29
PMS1-201ENST00000342075 ZNF589Q86UQ0 364 aaPredicted RBP16.83■□□□□ 0.28
PMS1-201ENST00000342075 FRAT2O75474 233 aaPredicted RBP16.83■□□□□ 0.28
PMS1-201ENST00000342075 IDH1O75874 414 aaKnown RBP16.83■□□□□ 0.28
PMS1-201ENST00000342075 CNKSR1Q969H4 720 aa16.83■□□□□ 0.28
PMS1-201ENST00000342075 PODXL2Q9NZ53 605 aa16.83■□□□□ 0.28
PMS1-201ENST00000342075 LEMD3Q9Y2U8 911 aa16.83■□□□□ 0.28
PMS1-201ENST00000342075 DOK7Q18PE1 504 aa16.82■□□□□ 0.28
PMS1-201ENST00000342075 WASHC4Q2M389 1173 aa16.82■□□□□ 0.28
PMS1-201ENST00000342075 TTLL6Q8N841 843 aa16.82■□□□□ 0.28
PMS1-201ENST00000342075 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.82■□□□□ 0.28
PMS1-201ENST00000342075 MYH7P12883 1935 aa16.81■□□□□ 0.28
PMS1-201ENST00000342075 ABCF2Q9UG63 623 aa16.81■□□□□ 0.28
PMS1-201ENST00000342075 BRCA1P38398 1863 aaKnown RBP16.81■□□□□ 0.28
PMS1-201ENST00000342075 UQCRFS1P1P0C7P4 283 aa16.81■□□□□ 0.28
PMS1-201ENST00000342075 ATP2B4P23634 1241 aa16.81■□□□□ 0.28
PMS1-201ENST00000342075 ZNF512BQ96KM6 892 aaPredicted RBP16.81■□□□□ 0.28
PMS1-201ENST00000342075 ANO2Q9NQ90 1003 aa16.81■□□□□ 0.28
PMS1-201ENST00000342075 GRIK5Q16478 980 aa16.8■□□□□ 0.28
PMS1-201ENST00000342075 KCNQ5Q9NR82 932 aa16.8■□□□□ 0.28
PMS1-201ENST00000342075 SNED1Q8TER0 1413 aa16.8■□□□□ 0.28
PMS1-201ENST00000342075 CASC1Q6TDU7 716 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms