RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 XAGE2Q96GT9 111 aa17.37■□□□□ 0.37
PCDHB13-201ENST00000341948 C8orf34Q49A92 452 aa17.37■□□□□ 0.37
PCDHB13-201ENST00000341948 BRINP3Q76B58 766 aa17.37■□□□□ 0.37
PCDHB13-201ENST00000341948 WDR17Q8IZU2 1322 aa17.37■□□□□ 0.37
PCDHB13-201ENST00000341948 MBD4O95243 580 aa17.37■□□□□ 0.37
PCDHB13-201ENST00000341948 UBA7P41226 1012 aa17.37■□□□□ 0.37
PCDHB13-201ENST00000341948 PLEKHM2Q8IWE5 1019 aa17.37■□□□□ 0.37
PCDHB13-201ENST00000341948 USP6P35125 1406 aa17.36■□□□□ 0.37
PCDHB13-201ENST00000341948 Q6ZUG5 572 aa17.36■□□□□ 0.37
PCDHB13-201ENST00000341948 CKAP2LQ8IYA6 745 aa17.36■□□□□ 0.37
PCDHB13-201ENST00000341948 MYOM2P54296 1465 aa17.36■□□□□ 0.37
PCDHB13-201ENST00000341948 PANK2Q9BZ23 570 aa17.36■□□□□ 0.37
PCDHB13-201ENST00000341948 SEPT11Q9NVA2 429 aaKnown RBP17.36■□□□□ 0.37
PCDHB13-201ENST00000341948 TRIM37O94972 964 aa17.36■□□□□ 0.37
PCDHB13-201ENST00000341948 SFPQP23246 707 aaKnown RBP eCLIP17.36■□□□□ 0.37
PCDHB13-201ENST00000341948 ASAP1Q9ULH1 1129 aa17.36■□□□□ 0.37
PCDHB13-201ENST00000341948 CNNM3Q8NE01 707 aa17.36■□□□□ 0.37
PCDHB13-201ENST00000341948 FAM196AQ6ZSG2 479 aa17.35■□□□□ 0.37
PCDHB13-201ENST00000341948 TTLL7Q6ZT98 887 aa17.35■□□□□ 0.37
PCDHB13-201ENST00000341948 CALML4Q96GE6 196 aa17.35■□□□□ 0.37
PCDHB13-201ENST00000341948 MPHOSPH6Q99547 160 aaKnown RBP17.35■□□□□ 0.37
PCDHB13-201ENST00000341948 EPB41L2O43491 1005 aaKnown RBP17.35■□□□□ 0.37
PCDHB13-201ENST00000341948 IDEP14735 1019 aa17.35■□□□□ 0.37
PCDHB13-201ENST00000341948 HEATR3Q7Z4Q2 680 aa17.35■□□□□ 0.37
PCDHB13-201ENST00000341948 RPS8P62241 208 aaKnown RBP17.35■□□□□ 0.37
PCDHB13-201ENST00000341948 ALG1Q9BT22 464 aa17.35■□□□□ 0.37
PCDHB13-201ENST00000341948 CHST3Q7LGC8 479 aa17.35■□□□□ 0.37
PCDHB13-201ENST00000341948 ALDH1B1P30837 517 aa17.34■□□□□ 0.37
PCDHB13-201ENST00000341948 CCDC181Q5TID7 509 aa17.34■□□□□ 0.37
PCDHB13-201ENST00000341948 AATKQ6ZMQ8 1374 aa17.34■□□□□ 0.37
PCDHB13-201ENST00000341948 EIF6P56537 245 aaKnown RBP17.34■□□□□ 0.37
PCDHB13-201ENST00000341948 LPIN2Q92539 896 aa17.34■□□□□ 0.37
PCDHB13-201ENST00000341948 NEURL1BA8MQ27 555 aa17.34■□□□□ 0.37
PCDHB13-201ENST00000341948 RBM25P49756 843 aaKnown RBP17.34■□□□□ 0.37
PCDHB13-201ENST00000341948 CCDC148Q8NFR7 591 aa17.34■□□□□ 0.37
PCDHB13-201ENST00000341948 CCDC171Q6TFL3 1326 aa17.34■□□□□ 0.37
PCDHB13-201ENST00000341948 ERBB3P21860 1342 aa17.33■□□□□ 0.37
PCDHB13-201ENST00000341948 LIG1P18858 919 aa17.33■□□□□ 0.37
PCDHB13-201ENST00000341948 UBE2HP62256 183 aa17.33■□□□□ 0.37
PCDHB13-201ENST00000341948 KLHL40Q2TBA0 621 aa17.33■□□□□ 0.37
PCDHB13-201ENST00000341948 WDR66Q8TBY9 1149 aa17.33■□□□□ 0.37
PCDHB13-201ENST00000341948 ZSCAN16Q9H4T2 348 aaPredicted RBP17.33■□□□□ 0.37
PCDHB13-201ENST00000341948 ARHGAP29Q52LW3 1261 aa17.33■□□□□ 0.36
PCDHB13-201ENST00000341948 PLS1Q14651 629 aa17.32■□□□□ 0.36
PCDHB13-201ENST00000341948 SNX21Q969T3 373 aa17.32■□□□□ 0.36
PCDHB13-201ENST00000341948 TSG101Q99816 390 aa17.32■□□□□ 0.36
PCDHB13-201ENST00000341948 PNMA6EA0A0J9YXQ4 647 aa17.32■□□□□ 0.36
PCDHB13-201ENST00000341948 ZSCAN22P10073 491 aaPredicted RBP17.32■□□□□ 0.36
PCDHB13-201ENST00000341948 KRT27Q7Z3Y8 459 aa17.32■□□□□ 0.36
PCDHB13-201ENST00000341948 SUPT20HQ8NEM7 779 aa17.32■□□□□ 0.36
PCDHB13-201ENST00000341948 SAP30BPQ9UHR5 308 aaKnown RBP17.32■□□□□ 0.36
PCDHB13-201ENST00000341948 KDM5CP41229 1560 aa17.32■□□□□ 0.36
PCDHB13-201ENST00000341948 KDM5AP29375 1690 aaKnown RBP17.32■□□□□ 0.36
PCDHB13-201ENST00000341948 CHMLP26374 656 aa17.32■□□□□ 0.36
PCDHB13-201ENST00000341948 NAPAP54920 295 aa17.32■□□□□ 0.36
PCDHB13-201ENST00000341948 ATP7BP35670 1465 aa17.32■□□□□ 0.36
PCDHB13-201ENST00000341948 ARHGAP31Q2M1Z3 1444 aa17.32■□□□□ 0.36
PCDHB13-201ENST00000341948 KIF20AO95235 890 aa17.31■□□□□ 0.36
PCDHB13-201ENST00000341948 PDE6BP35913 854 aa17.31■□□□□ 0.36
PCDHB13-201ENST00000341948 CREB3L3Q68CJ9 461 aa17.31■□□□□ 0.36
PCDHB13-201ENST00000341948 USP25Q9UHP3 1055 aa17.31■□□□□ 0.36
PCDHB13-201ENST00000341948 IGSF1Q8N6C5 1336 aa17.31■□□□□ 0.36
PCDHB13-201ENST00000341948 USPL1Q5W0Q7 1092 aa17.31■□□□□ 0.36
PCDHB13-201ENST00000341948 UNC5CLQ8IV45 518 aa17.31■□□□□ 0.36
PCDHB13-201ENST00000341948 BCS1LQ9Y276 419 aa17.31■□□□□ 0.36
PCDHB13-201ENST00000341948 CALM1P0DP23 149 aa17.31■□□□□ 0.36
PCDHB13-201ENST00000341948 CALM2P0DP24 149 aa17.31■□□□□ 0.36
PCDHB13-201ENST00000341948 CALM3P0DP25 149 aa17.31■□□□□ 0.36
PCDHB13-201ENST00000341948 SMARCC2Q8TAQ2 1214 aa17.3■□□□□ 0.36
PCDHB13-201ENST00000341948 AMPD3Q01432 767 aa17.3■□□□□ 0.36
PCDHB13-201ENST00000341948 ZNF397Q8NF99 534 aaPredicted RBP17.3■□□□□ 0.36
PCDHB13-201ENST00000341948 HELLSQ9NRZ9 838 aa17.3■□□□□ 0.36
PCDHB13-201ENST00000341948 CRKLP46109 303 aaKnown RBP17.3■□□□□ 0.36
PCDHB13-201ENST00000341948 NLGN1Q8N2Q7 840 aa17.3■□□□□ 0.36
PCDHB13-201ENST00000341948 ERBB4Q15303 1308 aa17.3■□□□□ 0.36
PCDHB13-201ENST00000341948 MROH5Q6ZUA9 1318 aa17.3■□□□□ 0.36
PCDHB13-201ENST00000341948 RAD50Q92878 1312 aa17.3■□□□□ 0.36
PCDHB13-201ENST00000341948 MAST3O60307 1309 aa17.3■□□□□ 0.36
PCDHB13-201ENST00000341948 OTUD7AQ8TE49 926 aaPredicted RBP17.3■□□□□ 0.36
PCDHB13-201ENST00000341948 ECM2O94769 699 aaPredicted RBP17.29■□□□□ 0.36
PCDHB13-201ENST00000341948 KIAA1328Q86T90 577 aa17.29■□□□□ 0.36
PCDHB13-201ENST00000341948 KIF2AO00139 706 aaPredicted RBP17.29■□□□□ 0.36
PCDHB13-201ENST00000341948 TOP1P11387 765 aaKnown RBP17.29■□□□□ 0.36
PCDHB13-201ENST00000341948 ARMT1Q9H993 441 aa17.29■□□□□ 0.36
PCDHB13-201ENST00000341948 PPIP5K2O43314 1243 aa17.29■□□□□ 0.36
PCDHB13-201ENST00000341948 RBM10P98175 930 aaKnown RBP17.29■□□□□ 0.36
PCDHB13-201ENST00000341948 NIM1KQ8IY84 436 aa17.29■□□□□ 0.36
PCDHB13-201ENST00000341948 MAP3K4Q9Y6R4 1608 aa17.29■□□□□ 0.36
PCDHB13-201ENST00000341948 SPATA31A3Q5VYP0 1347 aa17.29■□□□□ 0.36
PCDHB13-201ENST00000341948 ERLIN1O75477 346 aa17.29■□□□□ 0.36
PCDHB13-201ENST00000341948 CTSWP56202 376 aa17.29■□□□□ 0.36
PCDHB13-201ENST00000341948 RAB3GAP1Q15042 981 aa17.29■□□□□ 0.36
PCDHB13-201ENST00000341948 STX1AQ16623 288 aa17.29■□□□□ 0.36
PCDHB13-201ENST00000341948 DHX32Q7L7V1 743 aaKnown RBP17.29■□□□□ 0.36
PCDHB13-201ENST00000341948 CLIP2Q9UDT6 1046 aa17.29■□□□□ 0.36
PCDHB13-201ENST00000341948 ERLIN2O94905 339 aa17.28■□□□□ 0.36
PCDHB13-201ENST00000341948 FKBP15Q5T1M5 1219 aa17.28■□□□□ 0.36
PCDHB13-201ENST00000341948 ZNF408Q9H9D4 720 aa17.28■□□□□ 0.36
PCDHB13-201ENST00000341948 ZMYM4Q5VZL5 1548 aa17.28■□□□□ 0.36
PCDHB13-201ENST00000341948 ARAP3Q8WWN8 1544 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms