RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 CCDC184Q52MB2 194 aa16.67■□□□□ 0.26
NECTIN1-203ENST00000341398 DLK2Q6UY11 383 aa16.67■□□□□ 0.26
NECTIN1-203ENST00000341398 WDR63Q8IWG1 891 aa16.67■□□□□ 0.26
NECTIN1-203ENST00000341398 MPHOSPH8Q99549 860 aa16.67■□□□□ 0.26
NECTIN1-203ENST00000341398 ANKRD2Q9GZV1 360 aa16.67■□□□□ 0.26
NECTIN1-203ENST00000341398 MYOZ2Q9NPC6 264 aa16.67■□□□□ 0.26
NECTIN1-203ENST00000341398 MED23Q9ULK4 1368 aa16.67■□□□□ 0.26
NECTIN1-203ENST00000341398 AKAP11Q9UKA4 1901 aa16.67■□□□□ 0.26
NECTIN1-203ENST00000341398 SPEF2Q9C093 1822 aa16.67■□□□□ 0.26
NECTIN1-203ENST00000341398 GCKRQ14397 625 aa16.66■□□□□ 0.26
NECTIN1-203ENST00000341398 ANGEL2Q5VTE6 544 aaKnown RBP16.66■□□□□ 0.26
NECTIN1-203ENST00000341398 G2E3Q7L622 706 aa16.66■□□□□ 0.26
NECTIN1-203ENST00000341398 DNAAF4Q8WXU2 420 aa16.66■□□□□ 0.26
NECTIN1-203ENST00000341398 PLA2G12BQ9BX93 195 aa16.66■□□□□ 0.26
NECTIN1-203ENST00000341398 COA1Q9GZY4 146 aa16.66■□□□□ 0.26
NECTIN1-203ENST00000341398 MYO3BQ8WXR4 1341 aa16.66■□□□□ 0.26
NECTIN1-203ENST00000341398 PITPNM2Q9BZ72 1349 aa16.66■□□□□ 0.26
NECTIN1-203ENST00000341398 FKBP1BP68106 108 aa16.65■□□□□ 0.26
NECTIN1-203ENST00000341398 REM2Q8IYK8 340 aaPredicted RBP16.65■□□□□ 0.26
NECTIN1-203ENST00000341398 LINS1Q8NG48 757 aa16.65■□□□□ 0.26
NECTIN1-203ENST00000341398 FBXW7Q969H0 707 aa16.65■□□□□ 0.26
NECTIN1-203ENST00000341398 CDCA5Q96FF9 252 aa16.65■□□□□ 0.26
NECTIN1-203ENST00000341398 GMLQ99445 158 aa16.65■□□□□ 0.26
NECTIN1-203ENST00000341398 CCDC85CA6NKD9 419 aa16.64■□□□□ 0.26
NECTIN1-203ENST00000341398 ITGA6P23229 1130 aa16.64■□□□□ 0.26
NECTIN1-203ENST00000341398 STRIP1Q5VSL9 837 aa16.64■□□□□ 0.26
NECTIN1-203ENST00000341398 FAM155AB1AL88 458 aaPredicted RBP16.64■□□□□ 0.25
NECTIN1-203ENST00000341398 KCNJ4P48050 445 aa16.64■□□□□ 0.25
NECTIN1-203ENST00000341398 KIF23Q02241 960 aaPredicted RBP16.64■□□□□ 0.25
NECTIN1-203ENST00000341398 SAGE1Q9NXZ1 904 aa16.64■□□□□ 0.25
NECTIN1-203ENST00000341398 SALL2Q9Y467 1007 aaPredicted RBP16.64■□□□□ 0.25
NECTIN1-203ENST00000341398 ANKRD18BA2A2Z9 1011 aa16.63■□□□□ 0.25
NECTIN1-203ENST00000341398 VAMP4O75379 141 aa16.63■□□□□ 0.25
NECTIN1-203ENST00000341398 CSF1RP07333 972 aa16.63■□□□□ 0.25
NECTIN1-203ENST00000341398 TTLL5Q6EMB2 1281 aa16.63■□□□□ 0.25
NECTIN1-203ENST00000341398 ZIC5Q96T25 663 aa16.63■□□□□ 0.25
NECTIN1-203ENST00000341398 HDAC9Q9UKV0 1011 aa16.63■□□□□ 0.25
NECTIN1-203ENST00000341398 ZNF804BA4D1E1 1349 aa16.62■□□□□ 0.25
NECTIN1-203ENST00000341398 ASTN2O75129 1339 aaPredicted RBP16.62■□□□□ 0.25
NECTIN1-203ENST00000341398 FANCIQ9NVI1 1328 aa16.62■□□□□ 0.25
NECTIN1-203ENST00000341398 NF2P35240 595 aa16.62■□□□□ 0.25
NECTIN1-203ENST00000341398 DACT2Q5SW24 774 aa16.62■□□□□ 0.25
NECTIN1-203ENST00000341398 SLC10A3P09131 477 aa16.61■□□□□ 0.25
NECTIN1-203ENST00000341398 EXOSC9Q06265 439 aaKnown RBP16.61■□□□□ 0.25
NECTIN1-203ENST00000341398 DGKZQ13574 1117 aa16.61■□□□□ 0.25
NECTIN1-203ENST00000341398 MCOLN1Q9GZU1 580 aa16.61■□□□□ 0.25
NECTIN1-203ENST00000341398 WTIPA6NIX2 430 aaPredicted RBP16.6■□□□□ 0.25
NECTIN1-203ENST00000341398 TRPA1O75762 1119 aa16.6■□□□□ 0.25
NECTIN1-203ENST00000341398 CASP7P55210 303 aa16.6■□□□□ 0.25
NECTIN1-203ENST00000341398 IFIT5Q13325 482 aaKnown RBP16.6■□□□□ 0.25
NECTIN1-203ENST00000341398 NBPF9Q3BBW0 867 aa16.6■□□□□ 0.25
NECTIN1-203ENST00000341398 CHRNDQ07001 517 aa16.59■□□□□ 0.25
NECTIN1-203ENST00000341398 TTLL12Q14166 644 aaPredicted RBP16.59■□□□□ 0.25
NECTIN1-203ENST00000341398 CSRNP1Q96S65 589 aa16.59■□□□□ 0.25
NECTIN1-203ENST00000341398 RNF186Q9NXI6 227 aa16.59■□□□□ 0.25
NECTIN1-203ENST00000341398 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
NECTIN1-203ENST00000341398 PAPPA2Q9BXP8 1791 aa16.59■□□□□ 0.25
NECTIN1-203ENST00000341398 ZNF316A6NFI3 1004 aaPredicted RBP16.58■□□□□ 0.24
NECTIN1-203ENST00000341398 WNT10BO00744 389 aa16.58■□□□□ 0.24
NECTIN1-203ENST00000341398 GTF2IP78347 998 aa16.58■□□□□ 0.24
NECTIN1-203ENST00000341398 MLLT1Q03111 559 aaPredicted RBP16.58■□□□□ 0.24
NECTIN1-203ENST00000341398 TXNRD3Q86VQ6 643 aa16.58■□□□□ 0.24
NECTIN1-203ENST00000341398 CCDC57Q2TAC2 916 aa16.57■□□□□ 0.24
NECTIN1-203ENST00000341398 TAF7LQ5H9L4 462 aa16.57■□□□□ 0.24
NECTIN1-203ENST00000341398 APOBEC3FQ8IUX4 373 aaKnown RBP16.57■□□□□ 0.24
NECTIN1-203ENST00000341398 MXD3Q9BW11 206 aa16.57■□□□□ 0.24
NECTIN1-203ENST00000341398 CD209Q9NNX6 404 aa16.57■□□□□ 0.24
NECTIN1-203ENST00000341398 BEND3Q5T5X7 828 aa16.56■□□□□ 0.24
NECTIN1-203ENST00000341398 ARMC9Q7Z3E5 817 aa16.56■□□□□ 0.24
NECTIN1-203ENST00000341398 RASAL3Q86YV0 1011 aa16.56■□□□□ 0.24
NECTIN1-203ENST00000341398 KIAA0825Q8IV33 1275 aa16.56■□□□□ 0.24
NECTIN1-203ENST00000341398 C9orf78Q9NZ63 289 aaPredicted RBP16.56■□□□□ 0.24
NECTIN1-203ENST00000341398 TNRC18O15417 2968 aaPredicted RBP16.56■□□□□ 0.24
NECTIN1-203ENST00000341398 F6X3S4 739 aa16.55■□□□□ 0.24
NECTIN1-203ENST00000341398 UBE2Q2LH0YL09 131 aa16.55■□□□□ 0.24
NECTIN1-203ENST00000341398 RGS19P49795 217 aa16.55■□□□□ 0.24
NECTIN1-203ENST00000341398 FOXO4P98177 505 aa16.55■□□□□ 0.24
NECTIN1-203ENST00000341398 C15orf52Q6ZUT6 534 aaKnown RBP16.55■□□□□ 0.24
NECTIN1-203ENST00000341398 ZNF804AQ7Z570 1209 aa16.55■□□□□ 0.24
NECTIN1-203ENST00000341398 GRM8O00222 908 aa16.54■□□□□ 0.24
NECTIN1-203ENST00000341398 TAF5LO75529 589 aa16.54■□□□□ 0.24
NECTIN1-203ENST00000341398 DLGAP5Q15398 846 aa16.54■□□□□ 0.24
NECTIN1-203ENST00000341398 PRAMEF18Q5VWM3 479 aa16.54■□□□□ 0.24
NECTIN1-203ENST00000341398 LMBR1LQ6UX01 489 aa16.54■□□□□ 0.24
NECTIN1-203ENST00000341398 LDHAL6AQ6ZMR3 332 aa16.54■□□□□ 0.24
NECTIN1-203ENST00000341398 FAM9BQ8IZU0 186 aa16.54■□□□□ 0.24
NECTIN1-203ENST00000341398 SCAF8Q9UPN6 1271 aaKnown RBP16.54■□□□□ 0.24
NECTIN1-203ENST00000341398 MYO1BO43795 1136 aa16.53■□□□□ 0.24
NECTIN1-203ENST00000341398 ALDH1L1O75891 902 aa16.53■□□□□ 0.24
NECTIN1-203ENST00000341398 SASH1O94885 1247 aa16.53■□□□□ 0.24
NECTIN1-203ENST00000341398 HELBQ8NG08 1087 aaPredicted RBP16.53■□□□□ 0.24
NECTIN1-203ENST00000341398 CNNM1Q9NRU3 951 aa16.53■□□□□ 0.24
NECTIN1-203ENST00000341398 ZNF646O15015 1829 aaPredicted RBP16.53■□□□□ 0.24
NECTIN1-203ENST00000341398 KLRK1P26718 216 aa16.52■□□□□ 0.24
NECTIN1-203ENST00000341398 SLC4A10Q6U841 1118 aa16.52■□□□□ 0.24
NECTIN1-203ENST00000341398 MOB2Q70IA6 237 aa16.52■□□□□ 0.24
NECTIN1-203ENST00000341398 PLIN1O60240 522 aa16.51■□□□□ 0.23
NECTIN1-203ENST00000341398 IL1R1P14778 569 aa16.51■□□□□ 0.23
NECTIN1-203ENST00000341398 FKBP1AP62942 108 aaKnown RBP16.51■□□□□ 0.23
NECTIN1-203ENST00000341398 SREBF2Q12772 1141 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms