RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 NCBP1Q09161 790 aaKnown RBP16.82■□□□□ 0.28
CPSF7-201ENST00000340437 LRRC8AQ8IWT6 810 aa16.82■□□□□ 0.28
CPSF7-201ENST00000340437 IFNL2Q8IZJ0 200 aa16.82■□□□□ 0.28
CPSF7-201ENST00000340437 TUBGCP6Q96RT7 1819 aa16.82■□□□□ 0.28
CPSF7-201ENST00000340437 HSPA2P54652 639 aa16.82■□□□□ 0.28
CPSF7-201ENST00000340437 PI16Q6UXB8 463 aa16.82■□□□□ 0.28
CPSF7-201ENST00000340437 CEP57L1Q8IYX8 460 aa16.82■□□□□ 0.28
CPSF7-201ENST00000340437 ZNF771Q7L3S4 317 aaPredicted RBP16.82■□□□□ 0.28
CPSF7-201ENST00000340437 CLIC4Q9Y696 253 aa16.82■□□□□ 0.28
CPSF7-201ENST00000340437 ANKARQ7Z5J8 1434 aa16.82■□□□□ 0.28
CPSF7-201ENST00000340437 PFKFB2O60825 505 aa16.81■□□□□ 0.28
CPSF7-201ENST00000340437 TMC6Q7Z403 805 aa16.81■□□□□ 0.28
CPSF7-201ENST00000340437 ANO10Q9NW15 660 aa16.81■□□□□ 0.28
CPSF7-201ENST00000340437 PCDHA7Q9UN72 937 aa16.81■□□□□ 0.28
CPSF7-201ENST00000340437 CACNA1FO60840 1977 aa16.81■□□□□ 0.28
CPSF7-201ENST00000340437 PDIA3P30101 505 aaKnown RBP16.81■□□□□ 0.28
CPSF7-201ENST00000340437 SYNE3Q6ZMZ3 975 aa16.81■□□□□ 0.28
CPSF7-201ENST00000340437 FAM177A1Q8N128 213 aaPredicted RBP16.81■□□□□ 0.28
CPSF7-201ENST00000340437 C8orf76Q96K31 380 aa16.81■□□□□ 0.28
CPSF7-201ENST00000340437 KLF18A0A0U1RQI7 1052 aa16.81■□□□□ 0.28
CPSF7-201ENST00000340437 A0A1B0GUL7 405 aa16.81■□□□□ 0.28
CPSF7-201ENST00000340437 GOLGA8BA8MQT2 603 aa16.81■□□□□ 0.28
CPSF7-201ENST00000340437 M0R2C6 588 aa16.8■□□□□ 0.28
CPSF7-201ENST00000340437 NDUFA8P51970 172 aa16.8■□□□□ 0.28
CPSF7-201ENST00000340437 IQCB1Q15051 598 aa16.8■□□□□ 0.28
CPSF7-201ENST00000340437 TTC39AQ5SRH9 613 aa16.8■□□□□ 0.28
CPSF7-201ENST00000340437 USPL1Q5W0Q7 1092 aa16.8■□□□□ 0.28
CPSF7-201ENST00000340437 TMX1Q9H3N1 280 aa16.8■□□□□ 0.28
CPSF7-201ENST00000340437 SMTNL1A8MU46 457 aa16.8■□□□□ 0.28
CPSF7-201ENST00000340437 PDIA4P13667 645 aaKnown RBP16.8■□□□□ 0.28
CPSF7-201ENST00000340437 LMOD1P29536 600 aaPredicted RBP16.8■□□□□ 0.28
CPSF7-201ENST00000340437 ORC3Q9UBD5 711 aaPredicted RBP16.8■□□□□ 0.28
CPSF7-201ENST00000340437 UTYO14607 1347 aa16.8■□□□□ 0.28
CPSF7-201ENST00000340437 ERBB3P21860 1342 aa16.8■□□□□ 0.28
CPSF7-201ENST00000340437 ZSCAN20P17040 1043 aaPredicted RBP16.8■□□□□ 0.28
CPSF7-201ENST00000340437 ZBTB9Q96C00 473 aa16.8■□□□□ 0.28
CPSF7-201ENST00000340437 ZNF215Q9UL58 517 aaPredicted RBP16.8■□□□□ 0.28
CPSF7-201ENST00000340437 ADORA1P30542 326 aa16.79■□□□□ 0.28
CPSF7-201ENST00000340437 FAM160A1Q05DH4 1040 aa16.79■□□□□ 0.28
CPSF7-201ENST00000340437 HOMER1Q86YM7 354 aa16.79■□□□□ 0.28
CPSF7-201ENST00000340437 IFNKQ9P0W0 207 aa16.79■□□□□ 0.28
CPSF7-201ENST00000340437 CEP126Q9P2H0 1117 aa16.79■□□□□ 0.28
CPSF7-201ENST00000340437 CYP27B1O15528 508 aa16.79■□□□□ 0.28
CPSF7-201ENST00000340437 ADD1P35611 737 aaKnown RBP16.79■□□□□ 0.28
CPSF7-201ENST00000340437 RALYLQ86SE5 291 aaKnown RBP16.79■□□□□ 0.28
CPSF7-201ENST00000340437 ATF3P18847 181 aa16.78■□□□□ 0.28
CPSF7-201ENST00000340437 DPCR1Q3MIW9 517 aa16.78■□□□□ 0.28
CPSF7-201ENST00000340437 MRPS27Q92552 414 aaKnown RBP16.78■□□□□ 0.28
CPSF7-201ENST00000340437 OSBP2Q969R2 916 aa16.78■□□□□ 0.28
CPSF7-201ENST00000340437 AIFM3Q96NN9 605 aa16.78■□□□□ 0.28
CPSF7-201ENST00000340437 RCOR1Q9UKL0 485 aa16.78■□□□□ 0.28
CPSF7-201ENST00000340437 LRRC37A3O60309 1634 aa16.78■□□□□ 0.28
CPSF7-201ENST00000340437 MAST3O60307 1309 aa16.78■□□□□ 0.28
CPSF7-201ENST00000340437 RGPD2P0DJD1 1756 aa16.78■□□□□ 0.28
CPSF7-201ENST00000340437 TSGA10IPQ3SY00 556 aa16.78■□□□□ 0.28
CPSF7-201ENST00000340437 CCDC82Q8N4S0 544 aa16.78■□□□□ 0.28
CPSF7-201ENST00000340437 HMGB1P09429 215 aaKnown RBP16.78■□□□□ 0.28
CPSF7-201ENST00000340437 ATP2B1P20020 1258 aa16.78■□□□□ 0.28
CPSF7-201ENST00000340437 SNW1Q13573 536 aaKnown RBP16.78■□□□□ 0.28
CPSF7-201ENST00000340437 RNF113AO15541 343 aaKnown RBP16.77■□□□□ 0.28
CPSF7-201ENST00000340437 GOLGA8FQ08AF8 430 aa16.77■□□□□ 0.28
CPSF7-201ENST00000340437 GOLGA8DPQ0D2H9 430 aa16.77■□□□□ 0.28
CPSF7-201ENST00000340437 CWC25Q9NXE8 425 aaPredicted RBP16.77■□□□□ 0.28
CPSF7-201ENST00000340437 PRC1O43663 620 aa16.77■□□□□ 0.28
CPSF7-201ENST00000340437 NAT10Q9H0A0 1025 aaKnown RBP16.77■□□□□ 0.28
CPSF7-201ENST00000340437 DHX40Q8IX18 779 aaKnown RBP16.77■□□□□ 0.27
CPSF7-201ENST00000340437 TOMM22Q9NS69 142 aa16.77■□□□□ 0.27
CPSF7-201ENST00000340437 DENND2AQ9ULE3 1009 aa16.77■□□□□ 0.27
CPSF7-201ENST00000340437 CCDC57Q2TAC2 916 aa16.76■□□□□ 0.27
CPSF7-201ENST00000340437 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.76■□□□□ 0.27
CPSF7-201ENST00000340437 SMARCC2Q8TAQ2 1214 aa16.76■□□□□ 0.27
CPSF7-201ENST00000340437 CTAGE5O15320 804 aa16.76■□□□□ 0.27
CPSF7-201ENST00000340437 ELF2Q15723 593 aa16.76■□□□□ 0.27
CPSF7-201ENST00000340437 CCDC158Q5M9N0 1113 aa16.76■□□□□ 0.27
CPSF7-201ENST00000340437 ATG9AQ7Z3C6 839 aa16.76■□□□□ 0.27
CPSF7-201ENST00000340437 CHMP4CQ96CF2 233 aa16.76■□□□□ 0.27
CPSF7-201ENST00000340437 FAM89AQ96GI7 184 aa16.76■□□□□ 0.27
CPSF7-201ENST00000340437 XPO4Q9C0E2 1151 aaKnown RBP16.76■□□□□ 0.27
CPSF7-201ENST00000340437 SLC3A2P08195 630 aaKnown RBP16.76■□□□□ 0.27
CPSF7-201ENST00000340437 NAA16Q6N069 864 aaPredicted RBP16.76■□□□□ 0.27
CPSF7-201ENST00000340437 PLBD2Q8NHP8 589 aa16.76■□□□□ 0.27
CPSF7-201ENST00000340437 NBPF26B4DH59 902 aa16.75■□□□□ 0.27
CPSF7-201ENST00000340437 GPTP24298 496 aa16.75■□□□□ 0.27
CPSF7-201ENST00000340437 EVA1CP58658 441 aa16.75■□□□□ 0.27
CPSF7-201ENST00000340437 IMMTQ16891 758 aaKnown RBP16.75■□□□□ 0.27
CPSF7-201ENST00000340437 NBPF14Q5TI25 921 aa16.75■□□□□ 0.27
CPSF7-201ENST00000340437 NBPF10Q6P3W6 841 aaKnown RBP16.75■□□□□ 0.27
CPSF7-201ENST00000340437 NBPF15Q8N660 670 aa16.75■□□□□ 0.27
CPSF7-201ENST00000340437 PAXBP1Q9Y5B6 917 aa16.75■□□□□ 0.27
CPSF7-201ENST00000340437 FDPSP14324 419 aaKnown RBP16.75■□□□□ 0.27
CPSF7-201ENST00000340437 DMTNQ08495 405 aa16.75■□□□□ 0.27
CPSF7-201ENST00000340437 SPECC1Q5M775 1068 aa16.75■□□□□ 0.27
CPSF7-201ENST00000340437 SYT10Q6XYQ8 523 aa16.75■□□□□ 0.27
CPSF7-201ENST00000340437 RBM43Q6ZSC3 357 aaKnown RBP16.75■□□□□ 0.27
CPSF7-201ENST00000340437 ILDR1Q86SU0 546 aaPredicted RBP16.75■□□□□ 0.27
CPSF7-201ENST00000340437 ALDH8A1Q9H2A2 487 aaPredicted RBP16.75■□□□□ 0.27
CPSF7-201ENST00000340437 LTN1O94822 1766 aa16.75■□□□□ 0.27
CPSF7-201ENST00000340437 SPTLC2O15270 562 aa16.75■□□□□ 0.27
CPSF7-201ENST00000340437 ZMYM1Q5SVZ6 1142 aa16.75■□□□□ 0.27
CPSF7-201ENST00000340437 SYNE4Q8N205 404 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms