RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 COA1Q9GZY4 146 aa18.36■□□□□ 0.53
ERCC1-203ENST00000340192 ZNF609O15014 1411 aa18.35■□□□□ 0.53
ERCC1-203ENST00000340192 PLIN1O60240 522 aa18.35■□□□□ 0.53
ERCC1-203ENST00000340192 RSBN1LQ6PCB5 846 aaPredicted RBP18.35■□□□□ 0.53
ERCC1-203ENST00000340192 SAMD7Q7Z3H4 446 aa18.35■□□□□ 0.53
ERCC1-203ENST00000340192 KLRG1Q96E93 195 aa18.35■□□□□ 0.53
ERCC1-203ENST00000340192 PUS3Q9BZE2 481 aaKnown RBP18.35■□□□□ 0.53
ERCC1-203ENST00000340192 CREBZFQ9NS37 354 aa18.35■□□□□ 0.53
ERCC1-203ENST00000340192 TRPM7Q96QT4 1865 aa18.35■□□□□ 0.53
ERCC1-203ENST00000340192 IRS2Q9Y4H2 1338 aa18.34■□□□□ 0.53
ERCC1-203ENST00000340192 AGBL3Q8NEM8 1001 aa18.34■□□□□ 0.53
ERCC1-203ENST00000340192 FRAT1Q92837 279 aaPredicted RBP18.34■□□□□ 0.53
ERCC1-203ENST00000340192 IPO8O15397 1037 aaKnown RBP18.33■□□□□ 0.52
ERCC1-203ENST00000340192 EGFRP00533 1210 aa18.33■□□□□ 0.52
ERCC1-203ENST00000340192 UBTFL1P0CB47 393 aaPredicted RBP18.33■□□□□ 0.52
ERCC1-203ENST00000340192 TRIM27P14373 513 aa18.33■□□□□ 0.52
ERCC1-203ENST00000340192 TBC1D10BQ4KMP7 808 aaPredicted RBP18.33■□□□□ 0.52
ERCC1-203ENST00000340192 C15orf52Q6ZUT6 534 aaKnown RBP18.33■□□□□ 0.52
ERCC1-203ENST00000340192 ZC3H15Q8WU90 426 aaKnown RBP18.33■□□□□ 0.52
ERCC1-203ENST00000340192 PGAP2Q9UHJ9 254 aa18.33■□□□□ 0.52
ERCC1-203ENST00000340192 TMEM88BA6NKF7 163 aa18.32■□□□□ 0.52
ERCC1-203ENST00000340192 DACT2Q5SW24 774 aa18.32■□□□□ 0.52
ERCC1-203ENST00000340192 RBM26Q5T8P6 1007 aaKnown RBP18.32■□□□□ 0.52
ERCC1-203ENST00000340192 INTS3Q68E01 1043 aaKnown RBP18.32■□□□□ 0.52
ERCC1-203ENST00000340192 ATF7IPQ6VMQ6 1270 aa18.32■□□□□ 0.52
ERCC1-203ENST00000340192 FBXW7Q969H0 707 aa18.32■□□□□ 0.52
ERCC1-203ENST00000340192 GMLQ99445 158 aa18.32■□□□□ 0.52
ERCC1-203ENST00000340192 RIPOR2Q9Y4F9 1068 aa18.32■□□□□ 0.52
ERCC1-203ENST00000340192 POLR2AP24928 1970 aaKnown RBP18.31■□□□□ 0.52
ERCC1-203ENST00000340192 MROH5Q6ZUA9 1318 aa18.31■□□□□ 0.52
ERCC1-203ENST00000340192 TRAF5O00463 557 aa18.31■□□□□ 0.52
ERCC1-203ENST00000340192 FMR1Q06787 632 aaKnown RBP eCLIP18.31■□□□□ 0.52
ERCC1-203ENST00000340192 LRRC24Q50LG9 513 aa18.31■□□□□ 0.52
ERCC1-203ENST00000340192 STRIP1Q5VSL9 837 aa18.31■□□□□ 0.52
ERCC1-203ENST00000340192 KLHDC4Q8TBB5 520 aa18.31■□□□□ 0.52
ERCC1-203ENST00000340192 MEIS3Q99687 375 aa18.31■□□□□ 0.52
ERCC1-203ENST00000340192 MXD3Q9BW11 206 aa18.31■□□□□ 0.52
ERCC1-203ENST00000340192 CD209Q9NNX6 404 aa18.31■□□□□ 0.52
ERCC1-203ENST00000340192 TNNQ9UQP3 1299 aa18.31■□□□□ 0.52
ERCC1-203ENST00000340192 USP17L8P0C7I0 530 aa18.3■□□□□ 0.52
ERCC1-203ENST00000340192 ZNF280AP59817 542 aaPredicted RBP18.3■□□□□ 0.52
ERCC1-203ENST00000340192 KIF4BQ2VIQ3 1234 aa18.3■□□□□ 0.52
ERCC1-203ENST00000340192 ZNF804AQ7Z570 1209 aa18.3■□□□□ 0.52
ERCC1-203ENST00000340192 GLIS2Q9BZE0 524 aaPredicted RBP18.3■□□□□ 0.52
ERCC1-203ENST00000340192 LRRFIP2Q9Y608 721 aaKnown RBP18.3■□□□□ 0.52
ERCC1-203ENST00000340192 RFX5P48382 616 aaPredicted RBP18.29■□□□□ 0.52
ERCC1-203ENST00000340192 GTF2IP78347 998 aa18.29■□□□□ 0.52
ERCC1-203ENST00000340192 UBE4AQ14139 1066 aa18.29■□□□□ 0.52
ERCC1-203ENST00000340192 TTLL5Q6EMB2 1281 aa18.29■□□□□ 0.52
ERCC1-203ENST00000340192 CLUAP1Q96AJ1 413 aa18.29■□□□□ 0.52
ERCC1-203ENST00000340192 HDAC5Q9UQL6 1122 aa18.29■□□□□ 0.52
ERCC1-203ENST00000340192 MYO3BQ8WXR4 1341 aa18.28■□□□□ 0.52
ERCC1-203ENST00000340192 METTL24Q5JXM2 366 aa18.28■□□□□ 0.52
ERCC1-203ENST00000340192 ZKSCAN2Q63HK3 967 aa18.28■□□□□ 0.52
ERCC1-203ENST00000340192 JMYQ8N9B5 988 aa18.28■□□□□ 0.52
ERCC1-203ENST00000340192 MKRN1Q9UHC7 482 aaKnown RBP18.28■□□□□ 0.52
ERCC1-203ENST00000340192 GNAI3P08754 354 aa18.27■□□□□ 0.52
ERCC1-203ENST00000340192 IL1R1P14778 569 aa18.27■□□□□ 0.52
ERCC1-203ENST00000340192 CST9Q5W186 159 aa18.27■□□□□ 0.52
ERCC1-203ENST00000340192 CDC37L1Q7L3B6 337 aa18.27■□□□□ 0.52
ERCC1-203ENST00000340192 VGLL2Q8N8G2 317 aa18.27■□□□□ 0.52
ERCC1-203ENST00000340192 MYOZ2Q9NPC6 264 aa18.27■□□□□ 0.52
ERCC1-203ENST00000340192 GYG1P46976 350 aa18.26■□□□□ 0.51
ERCC1-203ENST00000340192 PTPN12Q05209 780 aaKnown RBP18.26■□□□□ 0.51
ERCC1-203ENST00000340192 USP48Q86UV5 1035 aa18.26■□□□□ 0.51
ERCC1-203ENST00000340192 DCPSQ96C86 337 aaKnown RBP18.26■□□□□ 0.51
ERCC1-203ENST00000340192 CNTNAP1P78357 1384 aa18.26■□□□□ 0.51
ERCC1-203ENST00000340192 ASTN2O75129 1339 aaPredicted RBP18.25■□□□□ 0.51
ERCC1-203ENST00000340192 PDE8BO95263 885 aa18.25■□□□□ 0.51
ERCC1-203ENST00000340192 SCARF1Q14162 830 aa18.25■□□□□ 0.51
ERCC1-203ENST00000340192 KRT26Q7Z3Y9 468 aa18.25■□□□□ 0.51
ERCC1-203ENST00000340192 OGFOD1Q8N543 542 aa18.25■□□□□ 0.51
ERCC1-203ENST00000340192 GGA3Q9NZ52 723 aa18.25■□□□□ 0.51
ERCC1-203ENST00000340192 ABT1Q9ULW3 272 aaKnown RBP18.25■□□□□ 0.51
ERCC1-203ENST00000340192 EYA2O00167 538 aa18.24■□□□□ 0.51
ERCC1-203ENST00000340192 DLK2Q6UY11 383 aa18.24■□□□□ 0.51
ERCC1-203ENST00000340192 KIAA0825Q8IV33 1275 aa18.24■□□□□ 0.51
ERCC1-203ENST00000340192 CERS5Q8N5B7 392 aa18.24■□□□□ 0.51
ERCC1-203ENST00000340192 TMEM57Q8N5G2 664 aa18.24■□□□□ 0.51
ERCC1-203ENST00000340192 FAM84BQ96KN1 310 aaPredicted RBP18.24■□□□□ 0.51
ERCC1-203ENST00000340192 SIL1Q9H173 461 aa18.24■□□□□ 0.51
ERCC1-203ENST00000340192 ARAP2Q8WZ64 1704 aa18.23■□□□□ 0.51
ERCC1-203ENST00000340192 RASSF10A6NK89 507 aa18.23■□□□□ 0.51
ERCC1-203ENST00000340192 ADM5C9JUS6 153 aa18.23■□□□□ 0.51
ERCC1-203ENST00000340192 CELF2O95319 508 aaKnown RBP18.23■□□□□ 0.51
ERCC1-203ENST00000340192 HIBADHP31937 336 aaKnown RBP18.23■□□□□ 0.51
ERCC1-203ENST00000340192 ANGEL2Q5VTE6 544 aaKnown RBP18.23■□□□□ 0.51
ERCC1-203ENST00000340192 ATG9AQ7Z3C6 839 aa18.23■□□□□ 0.51
ERCC1-203ENST00000340192 ZNF408Q9H9D4 720 aa18.23■□□□□ 0.51
ERCC1-203ENST00000340192 JAG2Q9Y219 1238 aa18.23■□□□□ 0.51
ERCC1-203ENST00000340192 SASH1O94885 1247 aa18.22■□□□□ 0.51
ERCC1-203ENST00000340192 MMP14P50281 582 aa18.22■□□□□ 0.51
ERCC1-203ENST00000340192 PUM3Q15397 648 aaKnown RBP18.22■□□□□ 0.51
ERCC1-203ENST00000340192 DEFB115Q30KQ5 88 aa18.22■□□□□ 0.51
ERCC1-203ENST00000340192 FTSJ3Q8IY81 847 aaKnown RBP18.22■□□□□ 0.51
ERCC1-203ENST00000340192 TDRD7Q8NHU6 1098 aaKnown RBP18.22■□□□□ 0.51
ERCC1-203ENST00000340192 MYH13Q9UKX3 1938 aa18.21■□□□□ 0.51
ERCC1-203ENST00000340192 CIAO1O76071 339 aa18.21■□□□□ 0.51
ERCC1-203ENST00000340192 FGFR2P21802 821 aa18.21■□□□□ 0.51
ERCC1-203ENST00000340192 VEGFBP49765 207 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms