RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 MCCP23508 829 aa25.58■■□□□ 1.69
VRK2-201ENST00000340157 EN1Q05925 392 aaPredicted RBP25.58■■□□□ 1.69
VRK2-201ENST00000340157 SEC62Q99442 399 aaKnown RBP25.58■■□□□ 1.69
VRK2-201ENST00000340157 ANAPC15P60006 121 aa25.57■■□□□ 1.68
VRK2-201ENST00000340157 ANO8Q9HCE9 1232 aaPredicted RBP25.57■■□□□ 1.68
VRK2-201ENST00000340157 DOCK2Q92608 1830 aa25.57■■□□□ 1.68
VRK2-201ENST00000340157 TICAM2Q86XR7 235 aa25.57■■□□□ 1.68
VRK2-201ENST00000340157 HSCBQ8IWL3 235 aa25.57■■□□□ 1.68
VRK2-201ENST00000340157 CRY2Q49AN0 593 aa25.56■■□□□ 1.68
VRK2-201ENST00000340157 QSER1Q2KHR3 1735 aa25.56■■□□□ 1.68
VRK2-201ENST00000340157 SLC51AQ86UW1 340 aa25.55■■□□□ 1.68
VRK2-201ENST00000340157 CYP2E1P05181 493 aaPredicted RBP25.55■■□□□ 1.68
VRK2-201ENST00000340157 UQCRFS1P1P0C7P4 283 aa25.55■■□□□ 1.68
VRK2-201ENST00000340157 ST5P78524 1137 aa25.55■■□□□ 1.68
VRK2-201ENST00000340157 CCDC129Q6ZRS4 1044 aa25.55■■□□□ 1.68
VRK2-201ENST00000340157 ERICH6Q7L0X2 663 aa25.55■■□□□ 1.68
VRK2-201ENST00000340157 RASEFQ8IZ41 740 aa25.55■■□□□ 1.68
VRK2-201ENST00000340157 FLAD1Q8NFF5 587 aa25.55■■□□□ 1.68
VRK2-201ENST00000340157 MAP4K1Q92918 833 aa25.55■■□□□ 1.68
VRK2-201ENST00000340157 BCAMP50895 628 aa25.54■■□□□ 1.68
VRK2-201ENST00000340157 ZMYM1Q5SVZ6 1142 aa25.54■■□□□ 1.68
VRK2-201ENST00000340157 HMG20BQ9P0W2 317 aa25.54■■□□□ 1.68
VRK2-201ENST00000340157 RNF113AO15541 343 aaKnown RBP25.53■■□□□ 1.68
VRK2-201ENST00000340157 RASGRF1Q13972 1273 aa25.53■■□□□ 1.68
VRK2-201ENST00000340157 UBE4AQ14139 1066 aa25.53■■□□□ 1.68
VRK2-201ENST00000340157 MCMDC2Q4G0Z9 681 aa25.53■■□□□ 1.68
VRK2-201ENST00000340157 NLGN1Q8N2Q7 840 aa25.53■■□□□ 1.68
VRK2-201ENST00000340157 SNX14Q9Y5W7 946 aa25.53■■□□□ 1.68
VRK2-201ENST00000340157 GRAPQ13588 217 aa25.53■■□□□ 1.68
VRK2-201ENST00000340157 NECTIN1Q15223 517 aa25.53■■□□□ 1.68
VRK2-201ENST00000340157 GRAPLQ8TC17 118 aaPredicted RBP25.53■■□□□ 1.68
VRK2-201ENST00000340157 KCNB2Q92953 911 aa25.53■■□□□ 1.68
VRK2-201ENST00000340157 PIH1D3Q9NQM4 214 aaKnown RBP25.53■■□□□ 1.68
VRK2-201ENST00000340157 RBM8AQ9Y5S9 174 aaKnown RBP25.52■■□□□ 1.68
VRK2-201ENST00000340157 HELLSQ9NRZ9 838 aa25.51■■□□□ 1.67
VRK2-201ENST00000340157 ZNF804BA4D1E1 1349 aa25.51■■□□□ 1.67
VRK2-201ENST00000340157 PRPF40BQ6NWY9 871 aaKnown RBP25.51■■□□□ 1.67
VRK2-201ENST00000340157 MAST3O60307 1309 aa25.51■■□□□ 1.67
VRK2-201ENST00000340157 KLRG2A4D1S0 409 aaPredicted RBP25.5■■□□□ 1.67
VRK2-201ENST00000340157 SPATA5Q8NB90 893 aa25.5■■□□□ 1.67
VRK2-201ENST00000340157 K7ELQ4 463 aaPredicted RBP25.49■■□□□ 1.67
VRK2-201ENST00000340157 KLRK1P26718 216 aa25.49■■□□□ 1.67
VRK2-201ENST00000340157 GYG1P46976 350 aa25.49■■□□□ 1.67
VRK2-201ENST00000340157 SLC15A2Q16348 729 aa25.49■■□□□ 1.67
VRK2-201ENST00000340157 OSBP2Q969R2 916 aa25.49■■□□□ 1.67
VRK2-201ENST00000340157 COL1A1P02452 1464 aaPredicted RBP25.49■■□□□ 1.67
VRK2-201ENST00000340157 SPRYD3Q8NCJ5 442 aa25.49■■□□□ 1.67
VRK2-201ENST00000340157 MYH13Q9UKX3 1938 aa25.48■■□□□ 1.67
VRK2-201ENST00000340157 COL11A2P13942 1736 aaPredicted RBP25.48■■□□□ 1.67
VRK2-201ENST00000340157 M0R2C6 588 aa25.48■■□□□ 1.67
VRK2-201ENST00000340157 RPGRQ92834 1020 aaKnown RBP25.48■■□□□ 1.67
VRK2-201ENST00000340157 ANKRD2Q9GZV1 360 aa25.48■■□□□ 1.67
VRK2-201ENST00000340157 MMP10P09238 476 aa25.47■■□□□ 1.67
VRK2-201ENST00000340157 NEK4P51957 841 aa25.47■■□□□ 1.67
VRK2-201ENST00000340157 TTF1Q15361 905 aaPredicted RBP25.47■■□□□ 1.67
VRK2-201ENST00000340157 CREB3L3Q68CJ9 461 aa25.47■■□□□ 1.67
VRK2-201ENST00000340157 MSL1Q68DK7 614 aa25.47■■□□□ 1.67
VRK2-201ENST00000340157 SLKQ9H2G2 1235 aaPredicted RBP25.47■■□□□ 1.67
VRK2-201ENST00000340157 IRS2Q9Y4H2 1338 aa25.47■■□□□ 1.67
VRK2-201ENST00000340157 ZFYP08048 801 aaPredicted RBP25.47■■□□□ 1.67
VRK2-201ENST00000340157 DEFB132Q7Z7B7 95 aa25.47■■□□□ 1.67
VRK2-201ENST00000340157 UPF3BQ9BZI7 483 aaKnown RBP25.47■■□□□ 1.67
VRK2-201ENST00000340157 ST18O60284 1047 aa25.46■■□□□ 1.67
VRK2-201ENST00000340157 HOXA10P31260 410 aaPredicted RBP25.46■■□□□ 1.67
VRK2-201ENST00000340157 VPS53Q5VIR6 699 aa25.46■■□□□ 1.67
VRK2-201ENST00000340157 FAM84BQ96KN1 310 aaPredicted RBP25.46■■□□□ 1.67
VRK2-201ENST00000340157 SLC27A2O14975 620 aa25.45■■□□□ 1.67
VRK2-201ENST00000340157 ADD2P35612 726 aa25.45■■□□□ 1.67
VRK2-201ENST00000340157 ADCK5Q3MIX3 580 aa25.45■■□□□ 1.67
VRK2-201ENST00000340157 TAF6LQ9Y6J9 622 aa25.45■■□□□ 1.67
VRK2-201ENST00000340157 LRRC37AA6NMS7 1700 aa25.45■■□□□ 1.67
VRK2-201ENST00000340157 LRRFIP1Q32MZ4 808 aaKnown RBP25.45■■□□□ 1.66
VRK2-201ENST00000340157 APPBP2Q92624 585 aa25.45■■□□□ 1.66
VRK2-201ENST00000340157 IQSEC3Q9UPP2 1182 aaPredicted RBP25.45■■□□□ 1.66
VRK2-201ENST00000340157 FBXO33Q7Z6M2 555 aa25.44■■□□□ 1.66
VRK2-201ENST00000340157 RBM17Q96I25 401 aaKnown RBP25.44■■□□□ 1.66
VRK2-201ENST00000340157 PUS7LQ9H0K6 701 aaKnown RBP25.44■■□□□ 1.66
VRK2-201ENST00000340157 WWC3Q9ULE0 1092 aa25.44■■□□□ 1.66
VRK2-201ENST00000340157 IDH1O75874 414 aaKnown RBP25.43■■□□□ 1.66
VRK2-201ENST00000340157 KCNJ4P48050 445 aa25.43■■□□□ 1.66
VRK2-201ENST00000340157 LTBP1Q14766 1721 aa25.43■■□□□ 1.66
VRK2-201ENST00000340157 BRIP1Q9BX63 1249 aa25.43■■□□□ 1.66
VRK2-201ENST00000340157 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.43■■□□□ 1.66
VRK2-201ENST00000340157 STK32BQ9NY57 414 aa25.43■■□□□ 1.66
VRK2-201ENST00000340157 TCRBV5S4A2TA0A5A2 114 aa25.43■■□□□ 1.66
VRK2-201ENST00000340157 FOXP2O15409 715 aa25.43■■□□□ 1.66
VRK2-201ENST00000340157 SLC9C2Q5TAH2 1124 aa25.43■■□□□ 1.66
VRK2-201ENST00000340157 PDE6AP16499 860 aa25.42■■□□□ 1.66
VRK2-201ENST00000340157 BAG6P46379 1132 aa25.42■■□□□ 1.66
VRK2-201ENST00000340157 WASHC4Q2M389 1173 aa25.42■■□□□ 1.66
VRK2-201ENST00000340157 TXNRD3Q86VQ6 643 aa25.42■■□□□ 1.66
VRK2-201ENST00000340157 CRAMP1Q96RY5 1269 aa25.42■■□□□ 1.66
VRK2-201ENST00000340157 RPAP1Q9BWH6 1393 aaPredicted RBP25.42■■□□□ 1.66
VRK2-201ENST00000340157 HSPD1P10809 573 aaKnown RBP25.41■■□□□ 1.66
VRK2-201ENST00000340157 COL9A3Q14050 684 aaPredicted RBP25.41■■□□□ 1.66
VRK2-201ENST00000340157 CAVIN4Q5BKX8 364 aa25.41■■□□□ 1.66
VRK2-201ENST00000340157 DSCC1Q9BVC3 393 aa25.41■■□□□ 1.66
VRK2-201ENST00000340157 PARP3Q9Y6F1 533 aa25.41■■□□□ 1.66
VRK2-201ENST00000340157 UBE3CQ15386 1083 aa25.4■■□□□ 1.66
VRK2-201ENST00000340157 TTC14Q96N46 770 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms