RNA–Protein interactions for RNA: ENST00000339530.8

LST1-203, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-203ENST00000339530 ZBTB22O15209 634 aa13.37□□□□□ -0.27
LST1-203ENST00000339530 ZFYP08048 801 aaPredicted RBP13.37□□□□□ -0.27
LST1-203ENST00000339530 TM4SF1P30408 202 aa13.37□□□□□ -0.27
LST1-203ENST00000339530 HSPA4P34932 840 aa13.37□□□□□ -0.27
LST1-203ENST00000339530 TTF1Q15361 905 aaPredicted RBP13.37□□□□□ -0.27
LST1-203ENST00000339530 CWC27Q6UX04 472 aaKnown RBP13.37□□□□□ -0.27
LST1-203ENST00000339530 SMIM5Q71RC9 77 aa13.37□□□□□ -0.27
LST1-203ENST00000339530 LSG1Q9H089 658 aaKnown RBP13.37□□□□□ -0.27
LST1-203ENST00000339530 MAST2Q6P0Q8 1798 aa13.37□□□□□ -0.27
LST1-203ENST00000339530 CCDC171Q6TFL3 1326 aa13.37□□□□□ -0.27
LST1-203ENST00000339530 DUOX1Q9NRD9 1551 aa13.37□□□□□ -0.27
LST1-203ENST00000339530 ADORA1P30542 326 aa13.36□□□□□ -0.27
LST1-203ENST00000339530 CHRNDQ07001 517 aa13.36□□□□□ -0.27
LST1-203ENST00000339530 NMIQ13287 307 aaPredicted RBP13.36□□□□□ -0.27
LST1-203ENST00000339530 UBE4AQ14139 1066 aa13.36□□□□□ -0.27
LST1-203ENST00000339530 PRR5LQ6MZQ0 368 aa13.36□□□□□ -0.27
LST1-203ENST00000339530 DDX46Q7L014 1031 aaKnown RBP13.36□□□□□ -0.27
LST1-203ENST00000339530 NLGN1Q8N2Q7 840 aa13.36□□□□□ -0.27
LST1-203ENST00000339530 TBC1D2Q9BYX2 928 aa13.36□□□□□ -0.27
LST1-203ENST00000339530 ANKRD2Q9GZV1 360 aa13.36□□□□□ -0.27
LST1-203ENST00000339530 PNPLA7Q6ZV29 1317 aa13.36□□□□□ -0.27
LST1-203ENST00000339530 GOLIM4O00461 696 aa13.35□□□□□ -0.27
LST1-203ENST00000339530 ST18O60284 1047 aa13.35□□□□□ -0.27
LST1-203ENST00000339530 SERPINB2P05120 415 aa13.35□□□□□ -0.27
LST1-203ENST00000339530 C3orf67Q6ZVT6 689 aa13.35□□□□□ -0.27
LST1-203ENST00000339530 HELLSQ9NRZ9 838 aa13.35□□□□□ -0.27
LST1-203ENST00000339530 GOLGB1Q14789 3259 aaKnown RBP13.35□□□□□ -0.27
LST1-203ENST00000339530 KIAA1551Q9HCM1 1747 aa13.35□□□□□ -0.27
LST1-203ENST00000339530 MYO5AQ9Y4I1 1855 aaKnown RBP13.35□□□□□ -0.27
LST1-203ENST00000339530 POLRMTO00411 1230 aaKnown RBP13.34□□□□□ -0.27
LST1-203ENST00000339530 GRIN3BO60391 1043 aa13.34□□□□□ -0.27
LST1-203ENST00000339530 RPS8P62241 208 aaKnown RBP13.34□□□□□ -0.27
LST1-203ENST00000339530 GRAPQ13588 217 aa13.34□□□□□ -0.27
LST1-203ENST00000339530 CRY2Q49AN0 593 aa13.34□□□□□ -0.27
LST1-203ENST00000339530 CCDC102BQ68D86 513 aa13.34□□□□□ -0.27
LST1-203ENST00000339530 ZSCAN25Q6NSZ9 544 aa13.34□□□□□ -0.27
LST1-203ENST00000339530 GRAPLQ8TC17 118 aaPredicted RBP13.34□□□□□ -0.27
LST1-203ENST00000339530 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.34□□□□□ -0.27
LST1-203ENST00000339530 IL25Q9H293 177 aa13.34□□□□□ -0.27
LST1-203ENST00000339530 A0A0D9SFI3 127 aa13.33□□□□□ -0.28
LST1-203ENST00000339530 MCM2P49736 904 aa13.33□□□□□ -0.28
LST1-203ENST00000339530 MCMDC2Q4G0Z9 681 aa13.33□□□□□ -0.28
LST1-203ENST00000339530 TMC4Q7Z404 712 aa13.33□□□□□ -0.28
LST1-203ENST00000339530 KLHL34Q8N239 644 aa13.33□□□□□ -0.28
LST1-203ENST00000339530 CELF1Q92879 486 aaKnown RBP13.33□□□□□ -0.28
LST1-203ENST00000339530 KCNB2Q92953 911 aa13.33□□□□□ -0.28
LST1-203ENST00000339530 FAM227BQ96M60 508 aa13.33□□□□□ -0.28
LST1-203ENST00000339530 HMG20BQ9P0W2 317 aa13.33□□□□□ -0.28
LST1-203ENST00000339530 LAMA4Q16363 1823 aa13.33□□□□□ -0.28
LST1-203ENST00000339530 CCDC88AQ3V6T2 1871 aa13.33□□□□□ -0.28
LST1-203ENST00000339530 ZNF804BA4D1E1 1349 aa13.33□□□□□ -0.28
LST1-203ENST00000339530 COL11A2P13942 1736 aaPredicted RBP13.33□□□□□ -0.28
LST1-203ENST00000339530 LTBP1Q14766 1721 aa13.33□□□□□ -0.28
LST1-203ENST00000339530 KLRG2A4D1S0 409 aaPredicted RBP13.32□□□□□ -0.28
LST1-203ENST00000339530 K7ELQ4 463 aaPredicted RBP13.32□□□□□ -0.28
LST1-203ENST00000339530 SEMA3EO15041 775 aa13.32□□□□□ -0.28
LST1-203ENST00000339530 RNF113AO15541 343 aaKnown RBP13.32□□□□□ -0.28
LST1-203ENST00000339530 MCAMP43121 646 aa13.32□□□□□ -0.28
LST1-203ENST00000339530 DDR1Q08345 913 aa13.32□□□□□ -0.28
LST1-203ENST00000339530 ZMYM1Q5SVZ6 1142 aa13.32□□□□□ -0.28
LST1-203ENST00000339530 RNF20Q5VTR2 975 aa13.32□□□□□ -0.28
LST1-203ENST00000339530 RPGRQ92834 1020 aaKnown RBP13.32□□□□□ -0.28
LST1-203ENST00000339530 MAP4K1Q92918 833 aa13.32□□□□□ -0.28
LST1-203ENST00000339530 EDC3Q96F86 508 aaKnown RBP13.32□□□□□ -0.28
LST1-203ENST00000339530 GNL3LQ9NVN8 582 aaKnown RBP13.32□□□□□ -0.28
LST1-203ENST00000339530 MINPP1Q9UNW1 487 aa13.32□□□□□ -0.28
LST1-203ENST00000339530 PDS5AQ29RF7 1337 aaKnown RBP13.32□□□□□ -0.28
LST1-203ENST00000339530 IGSF3O75054 1194 aa13.31□□□□□ -0.28
LST1-203ENST00000339530 ZAP70P43403 619 aa13.31□□□□□ -0.28
LST1-203ENST00000339530 PHKA1P46020 1223 aa13.31□□□□□ -0.28
LST1-203ENST00000339530 FKBP4Q02790 459 aaKnown RBP eCLIP13.31□□□□□ -0.28
LST1-203ENST00000339530 COL23A1Q86Y22 540 aaPredicted RBP13.31□□□□□ -0.28
LST1-203ENST00000339530 HELBQ8NG08 1087 aaPredicted RBP13.31□□□□□ -0.28
LST1-203ENST00000339530 RBM17Q96I25 401 aaKnown RBP13.31□□□□□ -0.28
LST1-203ENST00000339530 U3KPZ7 1027 aaPredicted RBP13.31□□□□□ -0.28
LST1-203ENST00000339530 TAF5LO75529 589 aa13.3□□□□□ -0.28
LST1-203ENST00000339530 ZKSCAN1P17029 563 aaPredicted RBP13.3□□□□□ -0.28
LST1-203ENST00000339530 HOXA10P31260 410 aaPredicted RBP13.3□□□□□ -0.28
LST1-203ENST00000339530 SCARF1Q14162 830 aa13.3□□□□□ -0.28
LST1-203ENST00000339530 CAVIN4Q5BKX8 364 aa13.3□□□□□ -0.28
LST1-203ENST00000339530 TMED8Q6PL24 325 aaPredicted RBP13.3□□□□□ -0.28
LST1-203ENST00000339530 APPBP2Q92624 585 aa13.3□□□□□ -0.28
LST1-203ENST00000339530 DSCC1Q9BVC3 393 aa13.3□□□□□ -0.28
LST1-203ENST00000339530 TM6SF1Q9BZW5 370 aa13.3□□□□□ -0.28
LST1-203ENST00000339530 DLEC1Q9Y238 1755 aa13.3□□□□□ -0.28
LST1-203ENST00000339530 KCNJ4P48050 445 aa13.29□□□□□ -0.28
LST1-203ENST00000339530 PTH1RQ03431 593 aa13.29□□□□□ -0.28
LST1-203ENST00000339530 KRT32Q14532 448 aa13.29□□□□□ -0.28
LST1-203ENST00000339530 NECTIN1Q15223 517 aa13.29□□□□□ -0.28
LST1-203ENST00000339530 UBE3CQ15386 1083 aa13.29□□□□□ -0.28
LST1-203ENST00000339530 ZNF589Q86UQ0 364 aaPredicted RBP13.29□□□□□ -0.28
LST1-203ENST00000339530 SPATA5Q8NB90 893 aa13.29□□□□□ -0.28
LST1-203ENST00000339530 CRAMP1Q96RY5 1269 aa13.29□□□□□ -0.28
LST1-203ENST00000339530 BRIP1Q9BX63 1249 aa13.29□□□□□ -0.28
LST1-203ENST00000339530 PALD1Q9ULE6 856 aa13.29□□□□□ -0.28
LST1-203ENST00000339530 LEMD3Q9Y2U8 911 aa13.29□□□□□ -0.28
LST1-203ENST00000339530 RBM8AQ9Y5S9 174 aaKnown RBP13.29□□□□□ -0.28
LST1-203ENST00000339530 PARP3Q9Y6F1 533 aa13.29□□□□□ -0.28
LST1-203ENST00000339530 NDUFB9Q9Y6M9 179 aa13.29□□□□□ -0.28
LST1-203ENST00000339530 MAST3O60307 1309 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms