RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 CALCOCO1Q9P1Z2 691 aa13.82□□□□□ -0.2
RBM39-202ENST00000338163 NDUFB9Q9Y6M9 179 aa13.82□□□□□ -0.2
RBM39-202ENST00000338163 LMO7Q8WWI1 1683 aa13.81□□□□□ -0.2
RBM39-202ENST00000338163 KCNQ3O43525 872 aa13.81□□□□□ -0.2
RBM39-202ENST00000338163 G3BP1Q13283 466 aaKnown RBP eCLIP13.81□□□□□ -0.2
RBM39-202ENST00000338163 TMC6Q7Z403 805 aa13.81□□□□□ -0.2
RBM39-202ENST00000338163 ERC1Q8IUD2 1116 aa13.81□□□□□ -0.2
RBM39-202ENST00000338163 RGPD2P0DJD1 1756 aa13.81□□□□□ -0.2
RBM39-202ENST00000338163 RGPD1P0DJD0 1748 aa13.81□□□□□ -0.2
RBM39-202ENST00000338163 CLCN6P51797 869 aa13.81□□□□□ -0.2
RBM39-202ENST00000338163 FSIP1Q8NA03 581 aa13.81□□□□□ -0.2
RBM39-202ENST00000338163 KLHDC4Q8TBB5 520 aa13.81□□□□□ -0.2
RBM39-202ENST00000338163 MAP3K2Q9Y2U5 619 aa13.81□□□□□ -0.2
RBM39-202ENST00000338163 ABCC6O95255 1503 aa13.81□□□□□ -0.2
RBM39-202ENST00000338163 PXDNLA1KZ92 1463 aa13.81□□□□□ -0.2
RBM39-202ENST00000338163 BIN1O00499 593 aa13.8□□□□□ -0.2
RBM39-202ENST00000338163 SFPQP23246 707 aaKnown RBP eCLIP13.8□□□□□ -0.2
RBM39-202ENST00000338163 PLEKHO1Q53GL0 409 aaPredicted RBP13.8□□□□□ -0.2
RBM39-202ENST00000338163 ZNF530Q6P9A1 599 aaPredicted RBP13.8□□□□□ -0.2
RBM39-202ENST00000338163 TAOK2Q9UL54 1235 aa13.8□□□□□ -0.2
RBM39-202ENST00000338163 COL14A1Q05707 1796 aaKnown RBP13.8□□□□□ -0.2
RBM39-202ENST00000338163 AFF2P51816 1311 aa13.8□□□□□ -0.2
RBM39-202ENST00000338163 CTAGE5O15320 804 aa13.8□□□□□ -0.2
RBM39-202ENST00000338163 FNBP4Q8N3X1 1017 aaPredicted RBP13.8□□□□□ -0.2
RBM39-202ENST00000338163 PPP1R13BQ96KQ4 1090 aa13.8□□□□□ -0.2
RBM39-202ENST00000338163 NEK1Q96PY6 1258 aa13.8□□□□□ -0.2
RBM39-202ENST00000338163 USP28Q96RU2 1077 aa13.8□□□□□ -0.2
RBM39-202ENST00000338163 NAT10Q9H0A0 1025 aaKnown RBP13.8□□□□□ -0.2
RBM39-202ENST00000338163 ZSCAN16Q9H4T2 348 aaPredicted RBP13.8□□□□□ -0.2
RBM39-202ENST00000338163 FAM208AQ9UK61 1670 aaKnown RBP13.8□□□□□ -0.2
RBM39-202ENST00000338163 CHGBP05060 677 aa13.79□□□□□ -0.2
RBM39-202ENST00000338163 IL2RBP14784 551 aa13.79□□□□□ -0.2
RBM39-202ENST00000338163 GSDMDP57764 484 aa13.79□□□□□ -0.2
RBM39-202ENST00000338163 CCT2P78371 535 aaKnown RBP13.79□□□□□ -0.2
RBM39-202ENST00000338163 E4F1Q66K89 784 aaPredicted RBP13.79□□□□□ -0.2
RBM39-202ENST00000338163 CCDC129Q6ZRS4 1044 aa13.79□□□□□ -0.2
RBM39-202ENST00000338163 PLCD3Q8N3E9 789 aa13.79□□□□□ -0.2
RBM39-202ENST00000338163 IFNKQ9P0W0 207 aa13.79□□□□□ -0.2
RBM39-202ENST00000338163 KIF2AO00139 706 aaPredicted RBP13.79□□□□□ -0.2
RBM39-202ENST00000338163 SLFNL1Q499Z3 407 aa13.79□□□□□ -0.2
RBM39-202ENST00000338163 XPO4Q9C0E2 1151 aaKnown RBP13.79□□□□□ -0.2
RBM39-202ENST00000338163 DNAI1Q9UI46 699 aa13.79□□□□□ -0.2
RBM39-202ENST00000338163 SASH1O94885 1247 aa13.78□□□□□ -0.2
RBM39-202ENST00000338163 AIMP1Q12904 312 aaKnown RBP13.78□□□□□ -0.2
RBM39-202ENST00000338163 FAM177A1Q8N128 213 aaPredicted RBP13.78□□□□□ -0.2
RBM39-202ENST00000338163 UBXN4Q92575 508 aa13.78□□□□□ -0.2
RBM39-202ENST00000338163 LGR6Q9HBX8 967 aa13.78□□□□□ -0.2
RBM39-202ENST00000338163 MEGF6O75095 1541 aa13.78□□□□□ -0.2
RBM39-202ENST00000338163 SLIT2O94813 1529 aa13.78□□□□□ -0.2
RBM39-202ENST00000338163 ADCY9O60503 1353 aa13.78□□□□□ -0.2
RBM39-202ENST00000338163 A0A0G2JS52 829 aa13.78□□□□□ -0.2
RBM39-202ENST00000338163 A0A1B0GVL5 298 aa13.78□□□□□ -0.2
RBM39-202ENST00000338163 NRDCO43847 1150 aa13.78□□□□□ -0.2
RBM39-202ENST00000338163 PNMA6AP0CW24 399 aaPredicted RBP13.78□□□□□ -0.2
RBM39-202ENST00000338163 FAM160A1Q05DH4 1040 aa13.78□□□□□ -0.2
RBM39-202ENST00000338163 SCRN1Q12765 414 aa13.78□□□□□ -0.2
RBM39-202ENST00000338163 AMOTQ4VCS5 1084 aa13.78□□□□□ -0.2
RBM39-202ENST00000338163 MNS1Q8NEH6 495 aa13.78□□□□□ -0.2
RBM39-202ENST00000338163 FHOD1Q9Y613 1164 aa13.78□□□□□ -0.2
RBM39-202ENST00000338163 HNRNPH2P55795 449 aaKnown RBP13.77□□□□□ -0.2
RBM39-202ENST00000338163 TEFQ10587 303 aa13.77□□□□□ -0.2
RBM39-202ENST00000338163 DPCR1Q3MIW9 517 aa13.77□□□□□ -0.2
RBM39-202ENST00000338163 C1orf141Q5JVX7 400 aa13.77□□□□□ -0.2
RBM39-202ENST00000338163 ISM2Q6H9L7 571 aa13.77□□□□□ -0.2
RBM39-202ENST00000338163 TMCO3Q6UWJ1 677 aa13.77□□□□□ -0.2
RBM39-202ENST00000338163 NBPF11Q86T75 865 aa13.77□□□□□ -0.2
RBM39-202ENST00000338163 NEK11Q8NG66 645 aa13.77□□□□□ -0.2
RBM39-202ENST00000338163 HMG20BQ9P0W2 317 aa13.77□□□□□ -0.2
RBM39-202ENST00000338163 BCL9LQ86UU0 1499 aa13.77□□□□□ -0.2
RBM39-202ENST00000338163 H2AFXP16104 143 aaPredicted RBP13.77□□□□□ -0.21
RBM39-202ENST00000338163 EIF4A1P60842 406 aaKnown RBP13.77□□□□□ -0.21
RBM39-202ENST00000338163 SEC62Q99442 399 aaKnown RBP13.77□□□□□ -0.21
RBM39-202ENST00000338163 DNAJC2Q99543 621 aaKnown RBP13.77□□□□□ -0.21
RBM39-202ENST00000338163 NCOA5Q9HCD5 579 aaKnown RBP13.77□□□□□ -0.21
RBM39-202ENST00000338163 SPATA31A1Q5TZJ5 1347 aa13.77□□□□□ -0.21
RBM39-202ENST00000338163 TAF5LO75529 589 aa13.77□□□□□ -0.21
RBM39-202ENST00000338163 SF3A1Q15459 793 aaKnown RBP13.77□□□□□ -0.21
RBM39-202ENST00000338163 BICC1Q9H694 974 aaKnown RBP13.77□□□□□ -0.21
RBM39-202ENST00000338163 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.77□□□□□ -0.211e-13■■□□□ 13.9
RBM39-202ENST00000338163 NCAPD2Q15021 1401 aa13.76□□□□□ -0.21
RBM39-202ENST00000338163 GIGYF1O75420 1035 aaPredicted RBP13.76□□□□□ -0.21
RBM39-202ENST00000338163 URI1O94763 535 aaPredicted RBP13.76□□□□□ -0.21
RBM39-202ENST00000338163 SEC31AO94979 1220 aaKnown RBP13.76□□□□□ -0.21
RBM39-202ENST00000338163 FAM98CQ17RN3 349 aaKnown RBP13.76□□□□□ -0.21
RBM39-202ENST00000338163 PROSER3Q2NL68 480 aa13.76□□□□□ -0.21
RBM39-202ENST00000338163 ARMCX5Q6P1M9 558 aa13.76□□□□□ -0.21
RBM39-202ENST00000338163 MPRIPQ6WCQ1 1025 aa13.76□□□□□ -0.21
RBM39-202ENST00000338163 ZCRB1Q8TBF4 217 aaKnown RBP13.76□□□□□ -0.21
RBM39-202ENST00000338163 ARGLU1Q9NWB6 273 aaPredicted RBP13.76□□□□□ -0.21
RBM39-202ENST00000338163 FAM53CQ9NYF3 392 aa13.76□□□□□ -0.21
RBM39-202ENST00000338163 SPATA31A5Q5VU36 1347 aa13.76□□□□□ -0.21
RBM39-202ENST00000338163 SPATA31A7Q8IWB4 1347 aa13.76□□□□□ -0.21
RBM39-202ENST00000338163 PTPDC1A2A3K4 754 aa13.76□□□□□ -0.21
RBM39-202ENST00000338163 CYP2C19P33261 490 aa13.76□□□□□ -0.21
RBM39-202ENST00000338163 KRT32Q14532 448 aa13.76□□□□□ -0.21
RBM39-202ENST00000338163 ZBTB9Q96C00 473 aa13.76□□□□□ -0.21
RBM39-202ENST00000338163 CAPN2P17655 700 aa13.75□□□□□ -0.21
RBM39-202ENST00000338163 LMOD1P29536 600 aaPredicted RBP13.75□□□□□ -0.21
RBM39-202ENST00000338163 APOBRQ0VD83 1088 aa13.75□□□□□ -0.21
RBM39-202ENST00000338163 MTX1Q13505 466 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms