RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 U3KPZ7 1027 aaPredicted RBP10.49□□□□□ -0.73
SNCA-201ENST00000336904 NUP188Q5SRE5 1749 aa10.49□□□□□ -0.73
SNCA-201ENST00000336904 H3BQV1 296 aa10.49□□□□□ -0.73
SNCA-201ENST00000336904 ZMYM1Q5SVZ6 1142 aa10.49□□□□□ -0.73
SNCA-201ENST00000336904 IFFO2Q5TF58 517 aa10.49□□□□□ -0.73
SNCA-201ENST00000336904 SLC51AQ86UW1 340 aa10.49□□□□□ -0.73
SNCA-201ENST00000336904 C17orf53Q8N3J3 647 aaPredicted RBP10.49□□□□□ -0.73
SNCA-201ENST00000336904 PTMAP06454 111 aaKnown RBP10.48□□□□□ -0.73
SNCA-201ENST00000336904 CTSWP56202 376 aa10.48□□□□□ -0.73
SNCA-201ENST00000336904 FAM184AQ8NB25 1140 aa10.48□□□□□ -0.73
SNCA-201ENST00000336904 GTF3C6Q969F1 213 aa10.48□□□□□ -0.73
SNCA-201ENST00000336904 TNS2Q63HR2 1409 aa10.48□□□□□ -0.73
SNCA-201ENST00000336904 PCCAP05165 728 aaPredicted RBP10.48□□□□□ -0.73
SNCA-201ENST00000336904 SUSD4Q5VX71 490 aa10.48□□□□□ -0.73
SNCA-201ENST00000336904 USPL1Q5W0Q7 1092 aa10.48□□□□□ -0.73
SNCA-201ENST00000336904 PIH1D3Q9NQM4 214 aaKnown RBP10.48□□□□□ -0.73
SNCA-201ENST00000336904 UBR2Q8IWV8 1755 aa10.48□□□□□ -0.73
SNCA-201ENST00000336904 EPB41L2O43491 1005 aaKnown RBP10.47□□□□□ -0.73
SNCA-201ENST00000336904 CTDNEP1O95476 244 aa10.47□□□□□ -0.73
SNCA-201ENST00000336904 FGAP02671 866 aa10.47□□□□□ -0.73
SNCA-201ENST00000336904 UBE2HP62256 183 aa10.47□□□□□ -0.73
SNCA-201ENST00000336904 ITPK1Q13572 414 aa10.47□□□□□ -0.73
SNCA-201ENST00000336904 SLC9C2Q5TAH2 1124 aa10.47□□□□□ -0.73
SNCA-201ENST00000336904 WWC3Q9ULE0 1092 aa10.47□□□□□ -0.73
SNCA-201ENST00000336904 PALLDQ8WX93 1383 aa10.47□□□□□ -0.73
SNCA-201ENST00000336904 DDB1Q16531 1140 aa10.47□□□□□ -0.73
SNCA-201ENST00000336904 MYL10Q9BUA6 226 aa10.47□□□□□ -0.73
SNCA-201ENST00000336904 SENP2Q9HC62 589 aa10.47□□□□□ -0.73
SNCA-201ENST00000336904 ISY1Q9ULR0 285 aaKnown RBP10.47□□□□□ -0.73
SNCA-201ENST00000336904 ANKRD18BA2A2Z9 1011 aa10.47□□□□□ -0.73
SNCA-201ENST00000336904 PTPDC1A2A3K4 754 aa10.47□□□□□ -0.73
SNCA-201ENST00000336904 UBE2Q2LH0YL09 131 aa10.47□□□□□ -0.73
SNCA-201ENST00000336904 SMIM22K7EJ46 135 aa10.47□□□□□ -0.73
SNCA-201ENST00000336904 GPAA1O43292 621 aa10.47□□□□□ -0.73
SNCA-201ENST00000336904 CRKLP46109 303 aaKnown RBP10.47□□□□□ -0.73
SNCA-201ENST00000336904 MARCH10Q8NA82 808 aaPredicted RBP10.47□□□□□ -0.73
SNCA-201ENST00000336904 CHMP4CQ96CF2 233 aa10.47□□□□□ -0.73
SNCA-201ENST00000336904 SPATA32Q96LK8 384 aa10.47□□□□□ -0.73
SNCA-201ENST00000336904 HMG20BQ9P0W2 317 aa10.47□□□□□ -0.73
SNCA-201ENST00000336904 ITGB4P16144 1822 aa10.46□□□□□ -0.73
SNCA-201ENST00000336904 FAM98CQ17RN3 349 aaKnown RBP10.46□□□□□ -0.73
SNCA-201ENST00000336904 RIC1Q4ADV7 1423 aa10.46□□□□□ -0.73
SNCA-201ENST00000336904 CCDC183Q5T5S1 534 aa10.46□□□□□ -0.73
SNCA-201ENST00000336904 BICD2Q8TD16 824 aa10.46□□□□□ -0.73
SNCA-201ENST00000336904 SYAP1Q96A49 352 aaPredicted RBP10.46□□□□□ -0.73
SNCA-201ENST00000336904 PPP1R9BQ96SB3 815 aa10.46□□□□□ -0.73
SNCA-201ENST00000336904 DACT1Q9NYF0 836 aa10.46□□□□□ -0.73
SNCA-201ENST00000336904 JAG2Q9Y219 1238 aa10.46□□□□□ -0.73
SNCA-201ENST00000336904 RIPOR2Q9Y4F9 1068 aa10.46□□□□□ -0.73
SNCA-201ENST00000336904 SH3TC1Q8TE82 1336 aa10.46□□□□□ -0.73
SNCA-201ENST00000336904 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.46□□□□□ -0.74
SNCA-201ENST00000336904 BCL9O00512 1426 aa10.46□□□□□ -0.74
SNCA-201ENST00000336904 GOLGA6L4A6NEF3 574 aa10.46□□□□□ -0.74
SNCA-201ENST00000336904 KRT85P78386 507 aa10.46□□□□□ -0.74
SNCA-201ENST00000336904 DHX32Q7L7V1 743 aaKnown RBP10.46□□□□□ -0.74
SNCA-201ENST00000336904 SPC24Q8NBT2 197 aa10.46□□□□□ -0.74
SNCA-201ENST00000336904 AIFM3Q96NN9 605 aa10.46□□□□□ -0.74
SNCA-201ENST00000336904 MYO5AQ9Y4I1 1855 aaKnown RBP10.46□□□□□ -0.74
SNCA-201ENST00000336904 AP5Z1O43299 807 aa10.45□□□□□ -0.74
SNCA-201ENST00000336904 MSNP26038 577 aaKnown RBP10.45□□□□□ -0.74
SNCA-201ENST00000336904 CLCN1P35523 988 aa10.45□□□□□ -0.74
SNCA-201ENST00000336904 ANKRD1Q15327 319 aa10.45□□□□□ -0.74
SNCA-201ENST00000336904 SLC4A8Q2Y0W8 1093 aa10.45□□□□□ -0.74
SNCA-201ENST00000336904 MIGA1Q8NAN2 632 aa10.45□□□□□ -0.74
SNCA-201ENST00000336904 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.45□□□□□ -0.74
SNCA-201ENST00000336904 NR1I2O75469 434 aa10.45□□□□□ -0.74
SNCA-201ENST00000336904 POLR3DP05423 398 aaPredicted RBP10.45□□□□□ -0.74
SNCA-201ENST00000336904 CCDC102BQ68D86 513 aa10.45□□□□□ -0.74
SNCA-201ENST00000336904 NSUN7Q8NE18 718 aaKnown RBP10.45□□□□□ -0.74
SNCA-201ENST00000336904 PGBD1Q96JS3 809 aa10.45□□□□□ -0.74
SNCA-201ENST00000336904 ATP6V1DQ9Y5K8 247 aa10.45□□□□□ -0.74
SNCA-201ENST00000336904 JCADQ9P266 1359 aa10.45□□□□□ -0.74
SNCA-201ENST00000336904 CIAO1O76071 339 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 CSF1RP07333 972 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 BCAMP50895 628 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 KRT32Q14532 448 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 C3orf67Q6ZVT6 689 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 CCDC82Q8N4S0 544 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 LEO1Q8WVC0 666 aaPredicted RBP10.44□□□□□ -0.74
SNCA-201ENST00000336904 ZKSCAN3Q9BRR0 538 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 HELLSQ9NRZ9 838 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 TOMM22Q9NS69 142 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 NIP7Q9Y221 180 aaKnown RBP eCLIP10.44□□□□□ -0.74
SNCA-201ENST00000336904 ZNF532Q9HCE3 1301 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 SLIT2O94813 1529 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 KLF18A0A0U1RQI7 1052 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 PRKAB2O43741 272 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 RRP12Q5JTH9 1297 aaKnown RBP10.44□□□□□ -0.74
SNCA-201ENST00000336904 C8orf37Q96NL8 207 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 TTC12Q9H892 705 aaPredicted RBP10.44□□□□□ -0.74
SNCA-201ENST00000336904 LAMA4Q16363 1823 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 LOC102724428A0A0B4J2F2 783 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 GOLGA8BA8MQT2 603 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 PRC1O43663 620 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 PDIA3P30101 505 aaKnown RBP10.44□□□□□ -0.74
SNCA-201ENST00000336904 SIK1P57059 783 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 CTDSPL2Q05D32 466 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 INTS5Q6P9B9 1019 aaKnown RBP10.44□□□□□ -0.74
SNCA-201ENST00000336904 LUZP1Q86V48 1076 aa10.44□□□□□ -0.74
SNCA-201ENST00000336904 TBC1D10CQ8IV04 446 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms