RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 ABCC6O95255 1503 aa20.93■□□□□ 0.94
IFFO1-201ENST00000336604 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.93■□□□□ 0.94
IFFO1-201ENST00000336604 TPM3P06753 285 aa20.93■□□□□ 0.94
IFFO1-201ENST00000336604 TRIM5Q9C035 493 aa20.93■□□□□ 0.94
IFFO1-201ENST00000336604 GPR108Q9NPR9 543 aa20.93■□□□□ 0.94
IFFO1-201ENST00000336604 PKD1L3Q7Z443 1732 aa20.93■□□□□ 0.94
IFFO1-201ENST00000336604 HMGN5P82970 282 aaKnown RBP20.92■□□□□ 0.94
IFFO1-201ENST00000336604 GUCY1B3Q02153 619 aa20.92■□□□□ 0.94
IFFO1-201ENST00000336604 NRBP1Q9UHY1 535 aa20.92■□□□□ 0.94
IFFO1-201ENST00000336604 CCDC186Q7Z3E2 898 aa20.92■□□□□ 0.94
IFFO1-201ENST00000336604 AGXT2Q9BYV1 514 aa20.92■□□□□ 0.94
IFFO1-201ENST00000336604 M0R2C6 588 aa20.91■□□□□ 0.94
IFFO1-201ENST00000336604 FKBP4Q02790 459 aaKnown RBP eCLIP20.91■□□□□ 0.94
IFFO1-201ENST00000336604 NAA16Q6N069 864 aaPredicted RBP20.91■□□□□ 0.94
IFFO1-201ENST00000336604 DRC7Q8IY82 874 aa20.91■□□□□ 0.94
IFFO1-201ENST00000336604 RNF113AO15541 343 aaKnown RBP20.91■□□□□ 0.94
IFFO1-201ENST00000336604 LRMPQ12912 555 aa20.91■□□□□ 0.94
IFFO1-201ENST00000336604 USP28Q96RU2 1077 aa20.91■□□□□ 0.94
IFFO1-201ENST00000336604 ATP2B3Q16720 1220 aa20.91■□□□□ 0.94
IFFO1-201ENST00000336604 SPATA31A3Q5VYP0 1347 aa20.91■□□□□ 0.94
IFFO1-201ENST00000336604 CCDC191Q8NCU4 936 aa20.91■□□□□ 0.94
IFFO1-201ENST00000336604 TDRD7Q8NHU6 1098 aaKnown RBP20.91■□□□□ 0.94
IFFO1-201ENST00000336604 OSBP2Q969R2 916 aa20.91■□□□□ 0.94
IFFO1-201ENST00000336604 SPDYE4A6NLX3 237 aa20.9■□□□□ 0.94
IFFO1-201ENST00000336604 PDIA3P30101 505 aaKnown RBP20.9■□□□□ 0.94
IFFO1-201ENST00000336604 ZCRB1Q8TBF4 217 aaKnown RBP20.9■□□□□ 0.94
IFFO1-201ENST00000336604 GOLPH3LQ9H4A5 285 aa20.9■□□□□ 0.94
IFFO1-201ENST00000336604 KIF3AQ9Y496 699 aa20.9■□□□□ 0.94
IFFO1-201ENST00000336604 ZNF75DP51815 510 aa20.9■□□□□ 0.94
IFFO1-201ENST00000336604 PLA2G4DQ86XP0 818 aa20.9■□□□□ 0.94
IFFO1-201ENST00000336604 CCAR1Q8IX12 1150 aaKnown RBP20.9■□□□□ 0.94
IFFO1-201ENST00000336604 CCDC85AQ96PX6 553 aaPredicted RBP20.9■□□□□ 0.94
IFFO1-201ENST00000336604 GPHNQ9NQX3 736 aaPredicted RBP20.9■□□□□ 0.94
IFFO1-201ENST00000336604 ZNF330Q9Y3S2 320 aaPredicted RBP20.9■□□□□ 0.94
IFFO1-201ENST00000336604 PLEKHG2Q9H7P9 1386 aa20.89■□□□□ 0.94
IFFO1-201ENST00000336604 LAMA4Q16363 1823 aa20.89■□□□□ 0.94
IFFO1-201ENST00000336604 LAMB4A4D0S4 1761 aa20.89■□□□□ 0.93
IFFO1-201ENST00000336604 PCDH11XQ9BZA7 1347 aa20.89■□□□□ 0.93
IFFO1-201ENST00000336604 PCDH11YQ9BZA8 1340 aa20.89■□□□□ 0.93
IFFO1-201ENST00000336604 SALL1Q9NSC2 1324 aa20.89■□□□□ 0.93
IFFO1-201ENST00000336604 TOM1L2Q6ZVM7 507 aa20.89■□□□□ 0.93
IFFO1-201ENST00000336604 RCOR1Q9UKL0 485 aa20.89■□□□□ 0.93
IFFO1-201ENST00000336604 A0A087WWV3 80 aa20.88■□□□□ 0.93
IFFO1-201ENST00000336604 GTF2F1P35269 517 aaKnown RBP eCLIP20.88■□□□□ 0.93
IFFO1-201ENST00000336604 CPDO75976 1380 aa20.88■□□□□ 0.93
IFFO1-201ENST00000336604 ADORA1P30542 326 aa20.88■□□□□ 0.93
IFFO1-201ENST00000336604 HAND2P61296 217 aa20.88■□□□□ 0.93
IFFO1-201ENST00000336604 UTP14CQ5TAP6 766 aaKnown RBP20.88■□□□□ 0.93
IFFO1-201ENST00000336604 C11orf57Q6ZUT1 292 aaPredicted RBP20.88■□□□□ 0.93
IFFO1-201ENST00000336604 ILDR1Q86SU0 546 aaPredicted RBP20.88■□□□□ 0.93
IFFO1-201ENST00000336604 CADPS2Q86UW7 1296 aa20.87■□□□□ 0.93
IFFO1-201ENST00000336604 CEP126Q9P2H0 1117 aa20.87■□□□□ 0.93
IFFO1-201ENST00000336604 CIAO1O76071 339 aa20.87■□□□□ 0.93
IFFO1-201ENST00000336604 SNW1Q13573 536 aaKnown RBP20.87■□□□□ 0.93
IFFO1-201ENST00000336604 BCL2L12Q9HB09 334 aa20.87■□□□□ 0.93
IFFO1-201ENST00000336604 PRDM11Q9NQV5 511 aa20.87■□□□□ 0.93
IFFO1-201ENST00000336604 TJP1Q07157 1748 aa20.87■□□□□ 0.93
IFFO1-201ENST00000336604 FOXP2O15409 715 aa20.86■□□□□ 0.93
IFFO1-201ENST00000336604 HSP90AB3PQ58FF7 597 aa20.86■□□□□ 0.93
IFFO1-201ENST00000336604 ERVV-2B6SEH9 535 aa20.86■□□□□ 0.93
IFFO1-201ENST00000336604 WASHC4Q2M389 1173 aa20.86■□□□□ 0.93
IFFO1-201ENST00000336604 CCDC57Q2TAC2 916 aa20.86■□□□□ 0.93
IFFO1-201ENST00000336604 GORABQ5T7V8 394 aa20.86■□□□□ 0.93
IFFO1-201ENST00000336604 ZNF274Q96GC6 653 aaPredicted RBP20.86■□□□□ 0.93
IFFO1-201ENST00000336604 CARMIL3Q8ND23 1372 aa20.86■□□□□ 0.93
IFFO1-201ENST00000336604 FDPSP14324 419 aaKnown RBP20.85■□□□□ 0.93
IFFO1-201ENST00000336604 ME1P48163 572 aa20.85■□□□□ 0.93
IFFO1-201ENST00000336604 SCARF1Q14162 830 aa20.85■□□□□ 0.93
IFFO1-201ENST00000336604 ERCC4Q92889 916 aaPredicted RBP20.85■□□□□ 0.93
IFFO1-201ENST00000336604 ATG3Q9NT62 314 aa20.85■□□□□ 0.93
IFFO1-201ENST00000336604 CLIP2Q9UDT6 1046 aa20.85■□□□□ 0.93
IFFO1-201ENST00000336604 WDR17Q8IZU2 1322 aa20.85■□□□□ 0.93
IFFO1-201ENST00000336604 IQCB1Q15051 598 aa20.85■□□□□ 0.93
IFFO1-201ENST00000336604 ZSCAN25Q6NSZ9 544 aa20.85■□□□□ 0.93
IFFO1-201ENST00000336604 KCPQ6ZWJ8 1503 aa20.85■□□□□ 0.93
IFFO1-201ENST00000336604 NUP188Q5SRE5 1749 aa20.85■□□□□ 0.93
IFFO1-201ENST00000336604 IGSF3O75054 1194 aa20.84■□□□□ 0.93
IFFO1-201ENST00000336604 TTC39AQ5SRH9 613 aa20.84■□□□□ 0.93
IFFO1-201ENST00000336604 OTUD7BQ6GQQ9 843 aa20.84■□□□□ 0.93
IFFO1-201ENST00000336604 PI16Q6UXB8 463 aa20.84■□□□□ 0.93
IFFO1-201ENST00000336604 CCDC73Q6ZRK6 1079 aa20.84■□□□□ 0.93
IFFO1-201ENST00000336604 XAGE2Q96GT9 111 aa20.84■□□□□ 0.93
IFFO1-201ENST00000336604 DCCP43146 1447 aa20.84■□□□□ 0.93
IFFO1-201ENST00000336604 CCDC144BQ3MJ40 725 aa20.84■□□□□ 0.93
IFFO1-201ENST00000336604 CCDC144CPQ8IYA2 1237 aa20.84■□□□□ 0.93
IFFO1-201ENST00000336604 RIOK3O14730 519 aaKnown RBP20.83■□□□□ 0.93
IFFO1-201ENST00000336604 CCDC158Q5M9N0 1113 aa20.83■□□□□ 0.93
IFFO1-201ENST00000336604 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.83■□□□□ 0.93
IFFO1-201ENST00000336604 FAM89AQ96GI7 184 aa20.83■□□□□ 0.93
IFFO1-201ENST00000336604 ZNF396Q96N95 335 aaPredicted RBP20.83■□□□□ 0.93
IFFO1-201ENST00000336604 PARP4Q9UKK3 1724 aaKnown RBP20.83■□□□□ 0.93
IFFO1-201ENST00000336604 GOLGA6L19H0YKK7 550 aa20.83■□□□□ 0.92
IFFO1-201ENST00000336604 KINO60870 393 aaKnown RBP20.83■□□□□ 0.92
IFFO1-201ENST00000336604 TICAM2Q86XR7 235 aa20.83■□□□□ 0.92
IFFO1-201ENST00000336604 RAB11FIP4Q86YS3 637 aa20.83■□□□□ 0.92
IFFO1-201ENST00000336604 ENGASEQ8NFI3 743 aa20.83■□□□□ 0.92
IFFO1-201ENST00000336604 CAVIN2O95810 425 aa20.82■□□□□ 0.92
IFFO1-201ENST00000336604 FGAP02671 866 aa20.82■□□□□ 0.92
IFFO1-201ENST00000336604 FAM160A1Q05DH4 1040 aa20.82■□□□□ 0.92
IFFO1-201ENST00000336604 CHAF1AQ13111 956 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms