RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 LRRC4BQ9NT99 713 aa16.2■□□□□ 0.18
LMO1-201ENST00000335790 U3KPZ7 1027 aaPredicted RBP16.2■□□□□ 0.18
LMO1-201ENST00000335790 FAM177BA6PVY3 158 aa16.19■□□□□ 0.18
LMO1-201ENST00000335790 ZBTB22O15209 634 aa16.19■□□□□ 0.18
LMO1-201ENST00000335790 FRAT2O75474 233 aaPredicted RBP16.19■□□□□ 0.18
LMO1-201ENST00000335790 APBA3O96018 575 aa16.19■□□□□ 0.18
LMO1-201ENST00000335790 HSP90AA1P07900 732 aaKnown RBP16.19■□□□□ 0.18
LMO1-201ENST00000335790 ZKSCAN1P17029 563 aaPredicted RBP16.19■□□□□ 0.18
LMO1-201ENST00000335790 VPS53Q5VIR6 699 aa16.19■□□□□ 0.18
LMO1-201ENST00000335790 PRPF40BQ6NWY9 871 aaKnown RBP16.19■□□□□ 0.18
LMO1-201ENST00000335790 AMIGO3Q86WK7 504 aa16.19■□□□□ 0.18
LMO1-201ENST00000335790 SETDB2Q96T68 719 aa16.19■□□□□ 0.18
LMO1-201ENST00000335790 SRP68Q9UHB9 627 aaKnown RBP16.19■□□□□ 0.18
LMO1-201ENST00000335790 MYO5AQ9Y4I1 1855 aaKnown RBP16.18■□□□□ 0.18
LMO1-201ENST00000335790 CYP2E1P05181 493 aaPredicted RBP16.18■□□□□ 0.18
LMO1-201ENST00000335790 SLC5A1P13866 664 aa16.18■□□□□ 0.18
LMO1-201ENST00000335790 PSMA5P28066 241 aa16.18■□□□□ 0.18
LMO1-201ENST00000335790 MCAMP43121 646 aa16.18■□□□□ 0.18
LMO1-201ENST00000335790 SCARF1Q14162 830 aa16.18■□□□□ 0.18
LMO1-201ENST00000335790 TTF1Q15361 905 aaPredicted RBP16.18■□□□□ 0.18
LMO1-201ENST00000335790 TRAPPC3LQ5T215 181 aa16.18■□□□□ 0.18
LMO1-201ENST00000335790 CAMKK2Q96RR4 588 aa16.18■□□□□ 0.18
LMO1-201ENST00000335790 UPF3BQ9BZI7 483 aaKnown RBP16.18■□□□□ 0.18
LMO1-201ENST00000335790 TAF1P21675 1872 aa16.17■□□□□ 0.18
LMO1-201ENST00000335790 ZAP70P43403 619 aa16.17■□□□□ 0.18
LMO1-201ENST00000335790 NUCB2P80303 420 aa16.17■□□□□ 0.18
LMO1-201ENST00000335790 KRT32Q14532 448 aa16.17■□□□□ 0.18
LMO1-201ENST00000335790 CCDC102BQ68D86 513 aa16.17■□□□□ 0.18
LMO1-201ENST00000335790 TPTE2Q6XPS3 522 aa16.17■□□□□ 0.18
LMO1-201ENST00000335790 SEC62Q99442 399 aaKnown RBP16.17■□□□□ 0.18
LMO1-201ENST00000335790 BSDC1Q9NW68 430 aaPredicted RBP16.17■□□□□ 0.18
LMO1-201ENST00000335790 RGPD3A6NKT7 1758 aaPredicted RBP16.17■□□□□ 0.18
LMO1-201ENST00000335790 RGPD4Q7Z3J3 1758 aa16.17■□□□□ 0.18
LMO1-201ENST00000335790 LAMA4Q16363 1823 aa16.17■□□□□ 0.18
LMO1-201ENST00000335790 TNRC6CQ9HCJ0 1690 aaKnown RBP16.16■□□□□ 0.18
LMO1-201ENST00000335790 ADCK5Q3MIX3 580 aa16.16■□□□□ 0.18
LMO1-201ENST00000335790 C3orf67Q6ZVT6 689 aa16.16■□□□□ 0.18
LMO1-201ENST00000335790 RUFY3Q7L099 469 aa16.16■□□□□ 0.18
LMO1-201ENST00000335790 CYP46A1Q9Y6A2 500 aa16.16■□□□□ 0.18
LMO1-201ENST00000335790 TNS1Q9HBL0 1735 aaKnown RBP16.16■□□□□ 0.18
LMO1-201ENST00000335790 MAST3O60307 1309 aa16.16■□□□□ 0.18
LMO1-201ENST00000335790 CARMIL3Q8ND23 1372 aa16.15■□□□□ 0.18
LMO1-201ENST00000335790 MCM4P33991 863 aa16.15■□□□□ 0.18
LMO1-201ENST00000335790 RFC4P35249 363 aa16.15■□□□□ 0.18
LMO1-201ENST00000335790 PHKA1P46020 1223 aa16.15■□□□□ 0.18
LMO1-201ENST00000335790 KCNJ4P48050 445 aa16.15■□□□□ 0.18
LMO1-201ENST00000335790 FKBP4Q02790 459 aaKnown RBP eCLIP16.15■□□□□ 0.18
LMO1-201ENST00000335790 CHRNDQ07001 517 aa16.15■□□□□ 0.18
LMO1-201ENST00000335790 ZSCAN25Q6NSZ9 544 aa16.15■□□□□ 0.18
LMO1-201ENST00000335790 SMIM5Q71RC9 77 aa16.15■□□□□ 0.18
LMO1-201ENST00000335790 ANKRD18AQ8IVF6 992 aa16.15■□□□□ 0.18
LMO1-201ENST00000335790 APPBP2Q92624 585 aa16.15■□□□□ 0.18
LMO1-201ENST00000335790 JAKMIP1Q96N16 626 aaKnown RBP16.15■□□□□ 0.18
LMO1-201ENST00000335790 CHGBP05060 677 aa16.14■□□□□ 0.17
LMO1-201ENST00000335790 CASTP20810 708 aaKnown RBP16.14■□□□□ 0.17
LMO1-201ENST00000335790 AK2P54819 239 aa16.14■□□□□ 0.17
LMO1-201ENST00000335790 UBE4AQ14139 1066 aa16.14■□□□□ 0.17
LMO1-201ENST00000335790 UBE3CQ15386 1083 aa16.14■□□□□ 0.17
LMO1-201ENST00000335790 NBPF5PQ86XG9 351 aaPredicted RBP16.14■□□□□ 0.17
LMO1-201ENST00000335790 TNPO1Q92973 898 aaKnown RBP16.14■□□□□ 0.17
LMO1-201ENST00000335790 OSBP2Q969R2 916 aa16.14■□□□□ 0.17
LMO1-201ENST00000335790 ZSCAN31Q96LW9 406 aaPredicted RBP16.14■□□□□ 0.17
LMO1-201ENST00000335790 NLRP3Q96P20 1036 aa16.14■□□□□ 0.17
LMO1-201ENST00000335790 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.14■□□□□ 0.17
LMO1-201ENST00000335790 LIMCH1Q9UPQ0 1083 aa16.14■□□□□ 0.17
LMO1-201ENST00000335790 ZNF804BA4D1E1 1349 aa16.14■□□□□ 0.17
LMO1-201ENST00000335790 PLSCR1O15162 318 aa16.13■□□□□ 0.17
LMO1-201ENST00000335790 TM4SF1P30408 202 aa16.13■□□□□ 0.17
LMO1-201ENST00000335790 ADD2P35612 726 aa16.13■□□□□ 0.17
LMO1-201ENST00000335790 BICDL1Q6ZP65 573 aa16.13■□□□□ 0.17
LMO1-201ENST00000335790 CCDC129Q6ZRS4 1044 aa16.13■□□□□ 0.17
LMO1-201ENST00000335790 ZGPATQ8N5A5 531 aaKnown RBP16.13■□□□□ 0.17
LMO1-201ENST00000335790 HELBQ8NG08 1087 aaPredicted RBP16.13■□□□□ 0.17
LMO1-201ENST00000335790 PDRG1Q9NUG6 133 aa16.13■□□□□ 0.17
LMO1-201ENST00000335790 M0R2C6 588 aa16.12■□□□□ 0.17
LMO1-201ENST00000335790 HSPD1P10809 573 aaKnown RBP16.12■□□□□ 0.17
LMO1-201ENST00000335790 RPS6KB1P23443 525 aa16.12■□□□□ 0.17
LMO1-201ENST00000335790 GTF2E1P29083 439 aaPredicted RBP16.12■□□□□ 0.17
LMO1-201ENST00000335790 NFIXQ14938 502 aa16.12■□□□□ 0.17
LMO1-201ENST00000335790 SH2B1Q9NRF2 756 aaPredicted RBP16.12■□□□□ 0.17
LMO1-201ENST00000335790 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
LMO1-201ENST00000335790 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.11■□□□□ 0.17
LMO1-201ENST00000335790 CYP21A2P08686 494 aa16.11■□□□□ 0.17
LMO1-201ENST00000335790 ANKRD1Q15327 319 aa16.11■□□□□ 0.17
LMO1-201ENST00000335790 BLOC1S2Q6QNY1 142 aa16.11■□□□□ 0.17
LMO1-201ENST00000335790 PI16Q6UXB8 463 aa16.11■□□□□ 0.17
LMO1-201ENST00000335790 PROM2Q8N271 834 aa16.11■□□□□ 0.17
LMO1-201ENST00000335790 SPATA5Q8NB90 893 aa16.11■□□□□ 0.17
LMO1-201ENST00000335790 GBP4Q96PP9 640 aa16.11■□□□□ 0.17
LMO1-201ENST00000335790 SPON1Q9HCB6 807 aa16.11■□□□□ 0.17
LMO1-201ENST00000335790 PIH1D3Q9NQM4 214 aaKnown RBP16.11■□□□□ 0.17
LMO1-201ENST00000335790 MINPP1Q9UNW1 487 aa16.11■□□□□ 0.17
LMO1-201ENST00000335790 NRXN2Q9P2S2 1712 aa16.11■□□□□ 0.17
LMO1-201ENST00000335790 TCRBV5S4A2TA0A5A2 114 aa16.1■□□□□ 0.17
LMO1-201ENST00000335790 DDX11L8A8MPP1 907 aa16.1■□□□□ 0.17
LMO1-201ENST00000335790 FOXP2O15409 715 aa16.1■□□□□ 0.17
LMO1-201ENST00000335790 GYS1P13807 737 aa16.1■□□□□ 0.17
LMO1-201ENST00000335790 PTMSP20962 102 aa16.1■□□□□ 0.17
LMO1-201ENST00000335790 RPS8P62241 208 aaKnown RBP16.1■□□□□ 0.17
LMO1-201ENST00000335790 TXNRD1Q16881 649 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms