RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 TCIRG1Q13488 830 aa27.53■■■□□ 2
NDEL1-201ENST00000334527 NAA16Q6N069 864 aaPredicted RBP27.53■■■□□ 2
NDEL1-201ENST00000334527 STRN4Q9NRL3 753 aa27.53■■■□□ 2
NDEL1-201ENST00000334527 GORABQ5T7V8 394 aa27.52■■■□□ 2
NDEL1-201ENST00000334527 C17orf53Q8N3J3 647 aaPredicted RBP27.52■■■□□ 2
NDEL1-201ENST00000334527 NCOA5Q9HCD5 579 aaKnown RBP27.52■■■□□ 2
NDEL1-201ENST00000334527 CEBPZQ03701 1054 aaKnown RBP27.52■■■□□ 2
NDEL1-201ENST00000334527 CCDC158Q5M9N0 1113 aa27.52■■■□□ 2
NDEL1-201ENST00000334527 TTC39AQ5SRH9 613 aa27.52■■■□□ 2
NDEL1-201ENST00000334527 CHST3Q7LGC8 479 aa27.52■■■□□ 2
NDEL1-201ENST00000334527 SPC24Q8NBT2 197 aa27.52■■■□□ 2
NDEL1-201ENST00000334527 OSBP2Q969R2 916 aa27.52■■■□□ 2
NDEL1-201ENST00000334527 KIF3AQ9Y496 699 aa27.52■■■□□ 2
NDEL1-201ENST00000334527 TTLL5Q6EMB2 1281 aa27.51■■□□□ 1.99
NDEL1-201ENST00000334527 CBX8Q9HC52 389 aa27.51■■□□□ 1.99
NDEL1-201ENST00000334527 ADORA1P30542 326 aa27.51■■□□□ 1.99
NDEL1-201ENST00000334527 HSPA2P54652 639 aa27.51■■□□□ 1.99
NDEL1-201ENST00000334527 CCDC85AQ96PX6 553 aaPredicted RBP27.51■■□□□ 1.99
NDEL1-201ENST00000334527 MYH15Q9Y2K3 1946 aa27.51■■□□□ 1.99
NDEL1-201ENST00000334527 XAGE2Q96GT9 111 aa27.5■■□□□ 1.99
NDEL1-201ENST00000334527 AKAP2Q9Y2D5 859 aa27.5■■□□□ 1.99
NDEL1-201ENST00000334527 ADD1P35611 737 aaKnown RBP27.5■■□□□ 1.99
NDEL1-201ENST00000334527 TMOD3Q9NYL9 352 aa27.5■■□□□ 1.99
NDEL1-201ENST00000334527 GOLGA6L6A8MZA4 724 aa27.49■■□□□ 1.99
NDEL1-201ENST00000334527 TPM3P06753 285 aa27.49■■□□□ 1.99
NDEL1-201ENST00000334527 PDIA3P30101 505 aaKnown RBP27.49■■□□□ 1.99
NDEL1-201ENST00000334527 RBM10P98175 930 aaKnown RBP27.49■■□□□ 1.99
NDEL1-201ENST00000334527 SOS2Q07890 1332 aaPredicted RBP27.49■■□□□ 1.99
NDEL1-201ENST00000334527 LRRFIP1Q32MZ4 808 aaKnown RBP27.49■■□□□ 1.99
NDEL1-201ENST00000334527 ZNF274Q96GC6 653 aaPredicted RBP27.49■■□□□ 1.99
NDEL1-201ENST00000334527 FAM89AQ96GI7 184 aa27.49■■□□□ 1.99
NDEL1-201ENST00000334527 SALL1Q9NSC2 1324 aa27.48■■□□□ 1.99
NDEL1-201ENST00000334527 WASHC4Q2M389 1173 aa27.48■■□□□ 1.99
NDEL1-201ENST00000334527 TAF7LQ5H9L4 462 aa27.48■■□□□ 1.99
NDEL1-201ENST00000334527 KCNF1Q9H3M0 494 aa27.48■■□□□ 1.99
NDEL1-201ENST00000334527 FBXO3Q9UK99 471 aa27.48■■□□□ 1.99
NDEL1-201ENST00000334527 PPFIA3O75145 1194 aa27.48■■□□□ 1.99
NDEL1-201ENST00000334527 SPTLC3Q9NUV7 552 aa27.48■■□□□ 1.99
NDEL1-201ENST00000334527 TOGARAM1Q9Y4F4 1720 aa27.47■■□□□ 1.99
NDEL1-201ENST00000334527 EVA1CP58658 441 aa27.47■■□□□ 1.99
NDEL1-201ENST00000334527 KIF6Q6ZMV9 814 aa27.47■■□□□ 1.99
NDEL1-201ENST00000334527 FTOQ9C0B1 505 aaKnown RBP eCLIP27.47■■□□□ 1.99
NDEL1-201ENST00000334527 PCCAP05165 728 aaPredicted RBP27.46■■□□□ 1.99
NDEL1-201ENST00000334527 TRIM28Q13263 835 aaKnown RBP27.46■■□□□ 1.99
NDEL1-201ENST00000334527 CTNNA3Q9UI47 895 aa27.46■■□□□ 1.99
NDEL1-201ENST00000334527 RCOR1Q9UKL0 485 aa27.46■■□□□ 1.99
NDEL1-201ENST00000334527 DYNC1I1O14576 645 aa27.45■■□□□ 1.99
NDEL1-201ENST00000334527 ZFYP08048 801 aaPredicted RBP27.45■■□□□ 1.99
NDEL1-201ENST00000334527 SCARF1Q14162 830 aa27.45■■□□□ 1.99
NDEL1-201ENST00000334527 IFIT5Q13325 482 aaKnown RBP27.45■■□□□ 1.98
NDEL1-201ENST00000334527 DNAJC10Q8IXB1 793 aa27.45■■□□□ 1.98
NDEL1-201ENST00000334527 DNAJC25Q9H1X3 360 aa27.45■■□□□ 1.98
NDEL1-201ENST00000334527 PDCL3Q9H2J4 239 aa27.45■■□□□ 1.98
NDEL1-201ENST00000334527 FAM13BQ9NYF5 915 aa27.45■■□□□ 1.98
NDEL1-201ENST00000334527 FOXP2O15409 715 aa27.44■■□□□ 1.98
NDEL1-201ENST00000334527 HAND2P61296 217 aa27.44■■□□□ 1.98
NDEL1-201ENST00000334527 GUCY1B3Q02153 619 aa27.44■■□□□ 1.98
NDEL1-201ENST00000334527 UBE2Q2Q8WVN8 375 aa27.44■■□□□ 1.98
NDEL1-201ENST00000334527 ABCA3Q99758 1704 aa27.44■■□□□ 1.98
NDEL1-201ENST00000334527 NWD2Q9ULI1 1742 aa27.44■■□□□ 1.98
NDEL1-201ENST00000334527 ZNF165P49910 485 aa27.44■■□□□ 1.98
NDEL1-201ENST00000334527 IMMTQ16891 758 aaKnown RBP27.44■■□□□ 1.98
NDEL1-201ENST00000334527 ZBTB38Q8NAP3 1195 aaPredicted RBP27.44■■□□□ 1.98
NDEL1-201ENST00000334527 USP28Q96RU2 1077 aa27.44■■□□□ 1.98
NDEL1-201ENST00000334527 ASAP1Q9ULH1 1129 aa27.44■■□□□ 1.98
NDEL1-201ENST00000334527 PYCARDQ9ULZ3 195 aa27.44■■□□□ 1.98
NDEL1-201ENST00000334527 CARMIL3Q8ND23 1372 aa27.43■■□□□ 1.98
NDEL1-201ENST00000334527 ZAP70P43403 619 aa27.43■■□□□ 1.98
NDEL1-201ENST00000334527 CCAR1Q8IX12 1150 aaKnown RBP27.43■■□□□ 1.98
NDEL1-201ENST00000334527 KIAA1524Q8TCG1 905 aa27.43■■□□□ 1.98
NDEL1-201ENST00000334527 CHMP4CQ96CF2 233 aa27.43■■□□□ 1.98
NDEL1-201ENST00000334527 ZNF396Q96N95 335 aaPredicted RBP27.43■■□□□ 1.98
NDEL1-201ENST00000334527 PLA2G12BQ9BX93 195 aa27.43■■□□□ 1.98
NDEL1-201ENST00000334527 SLAIN2Q9P270 581 aa27.43■■□□□ 1.98
NDEL1-201ENST00000334527 CSF1RP07333 972 aa27.43■■□□□ 1.98
NDEL1-201ENST00000334527 FBXL16Q8N461 479 aa27.43■■□□□ 1.98
NDEL1-201ENST00000334527 TDRD7Q8NHU6 1098 aaKnown RBP27.43■■□□□ 1.98
NDEL1-201ENST00000334527 GPHNQ9NQX3 736 aaPredicted RBP27.43■■□□□ 1.98
NDEL1-201ENST00000334527 HSP90AB3PQ58FF7 597 aa27.42■■□□□ 1.98
NDEL1-201ENST00000334527 ATL3Q6DD88 541 aa27.42■■□□□ 1.98
NDEL1-201ENST00000334527 TEX13AQ9BXU3 409 aaPredicted RBP27.42■■□□□ 1.98
NDEL1-201ENST00000334527 FGAP02671 866 aa27.41■■□□□ 1.98
NDEL1-201ENST00000334527 PI16Q6UXB8 463 aa27.41■■□□□ 1.98
NDEL1-201ENST00000334527 APPBP2Q92624 585 aa27.41■■□□□ 1.98
NDEL1-201ENST00000334527 GOLPH3LQ9H4A5 285 aa27.41■■□□□ 1.98
NDEL1-201ENST00000334527 EVCP57679 992 aa27.41■■□□□ 1.98
NDEL1-201ENST00000334527 PIGBQ92521 554 aa27.41■■□□□ 1.98
NDEL1-201ENST00000334527 PUS7LQ9H0K6 701 aaKnown RBP27.41■■□□□ 1.98
NDEL1-201ENST00000334527 FDPSP14324 419 aaKnown RBP27.4■■□□□ 1.98
NDEL1-201ENST00000334527 PTGS1P23219 599 aa27.4■■□□□ 1.98
NDEL1-201ENST00000334527 ILDR1Q86SU0 546 aaPredicted RBP27.4■■□□□ 1.98
NDEL1-201ENST00000334527 VSIG10Q8N0Z9 540 aa27.4■■□□□ 1.98
NDEL1-201ENST00000334527 SYNE4Q8N205 404 aa27.4■■□□□ 1.98
NDEL1-201ENST00000334527 MYRIPQ8NFW9 859 aa27.4■■□□□ 1.98
NDEL1-201ENST00000334527 PRIMPOLQ96LW4 560 aa27.4■■□□□ 1.98
NDEL1-201ENST00000334527 TRIM5Q9C035 493 aa27.4■■□□□ 1.98
NDEL1-201ENST00000334527 CCDC73Q6ZRK6 1079 aa27.4■■□□□ 1.98
NDEL1-201ENST00000334527 STARD3NLO95772 234 aa27.39■■□□□ 1.98
NDEL1-201ENST00000334527 ATP2B3Q16720 1220 aa27.39■■□□□ 1.98
NDEL1-201ENST00000334527 METTL24Q5JXM2 366 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms