RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 ASAP1Q9ULH1 1129 aa10.73□□□□□ -0.69
TREM1-202ENST00000334475 LIMCH1Q9UPQ0 1083 aa10.73□□□□□ -0.69
TREM1-202ENST00000334475 AKAP2Q9Y2D5 859 aa10.73□□□□□ -0.69
TREM1-202ENST00000334475 RBM8AQ9Y5S9 174 aaKnown RBP10.73□□□□□ -0.69
TREM1-202ENST00000334475 CYP46A1Q9Y6A2 500 aa10.73□□□□□ -0.69
TREM1-202ENST00000334475 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.73□□□□□ -0.69
TREM1-202ENST00000334475 SH3TC1Q8TE82 1336 aa10.73□□□□□ -0.69
TREM1-202ENST00000334475 COL5A3P25940 1745 aaPredicted RBP10.72□□□□□ -0.69
TREM1-202ENST00000334475 BCORQ6W2J9 1755 aa10.72□□□□□ -0.69
TREM1-202ENST00000334475 CSF1RP07333 972 aa10.72□□□□□ -0.69
TREM1-202ENST00000334475 CYP19A1P11511 503 aaPredicted RBP10.72□□□□□ -0.69
TREM1-202ENST00000334475 PTH1RQ03431 593 aa10.72□□□□□ -0.69
TREM1-202ENST00000334475 ANKRD1Q15327 319 aa10.72□□□□□ -0.69
TREM1-202ENST00000334475 USPL1Q5W0Q7 1092 aa10.72□□□□□ -0.69
TREM1-202ENST00000334475 CREB3L3Q68CJ9 461 aa10.72□□□□□ -0.69
TREM1-202ENST00000334475 KBTBD3Q8NAB2 608 aa10.72□□□□□ -0.69
TREM1-202ENST00000334475 DBNDD2Q9BQY9 259 aa10.72□□□□□ -0.69
TREM1-202ENST00000334475 UPF3BQ9BZI7 483 aaKnown RBP10.72□□□□□ -0.69
TREM1-202ENST00000334475 CHMP3Q9Y3E7 222 aa10.72□□□□□ -0.69
TREM1-202ENST00000334475 WDR33Q9C0J8 1336 aaKnown RBP10.72□□□□□ -0.69
TREM1-202ENST00000334475 A0A0D9SFI3 127 aa10.71□□□□□ -0.69
TREM1-202ENST00000334475 KCNJ4P48050 445 aa10.71□□□□□ -0.69
TREM1-202ENST00000334475 MRE11P49959 708 aa10.71□□□□□ -0.69
TREM1-202ENST00000334475 AK2P54819 239 aa10.71□□□□□ -0.69
TREM1-202ENST00000334475 CCDC57Q2TAC2 916 aa10.71□□□□□ -0.69
TREM1-202ENST00000334475 PRPF40BQ6NWY9 871 aaKnown RBP10.71□□□□□ -0.69
TREM1-202ENST00000334475 RUFY3Q7L099 469 aa10.71□□□□□ -0.69
TREM1-202ENST00000334475 JARID2Q92833 1246 aaPredicted RBP10.71□□□□□ -0.69
TREM1-202ENST00000334475 AK7Q96M32 723 aa10.71□□□□□ -0.69
TREM1-202ENST00000334475 JAKMIP1Q96N16 626 aaKnown RBP10.71□□□□□ -0.69
TREM1-202ENST00000334475 HELLSQ9NRZ9 838 aa10.71□□□□□ -0.69
TREM1-202ENST00000334475 LAMA4Q16363 1823 aa10.7□□□□□ -0.7
TREM1-202ENST00000334475 SLC27A2O14975 620 aa10.7□□□□□ -0.7
TREM1-202ENST00000334475 MBD3O95983 291 aa10.7□□□□□ -0.7
TREM1-202ENST00000334475 CASTP20810 708 aaKnown RBP10.7□□□□□ -0.7
TREM1-202ENST00000334475 MCMDC2Q4G0Z9 681 aa10.7□□□□□ -0.7
TREM1-202ENST00000334475 SLC16A10Q8TF71 515 aa10.7□□□□□ -0.7
TREM1-202ENST00000334475 SLC39A7Q92504 469 aa10.7□□□□□ -0.7
TREM1-202ENST00000334475 FAM227BQ96M60 508 aa10.7□□□□□ -0.7
TREM1-202ENST00000334475 BMP2KQ9NSY1 1161 aaPredicted RBP10.7□□□□□ -0.7
TREM1-202ENST00000334475 PDRG1Q9NUG6 133 aa10.7□□□□□ -0.7
TREM1-202ENST00000334475 TFCP2L1Q9NZI6 479 aa10.7□□□□□ -0.7
TREM1-202ENST00000334475 CEP126Q9P2H0 1117 aa10.7□□□□□ -0.7
TREM1-202ENST00000334475 WWC3Q9ULE0 1092 aa10.7□□□□□ -0.7
TREM1-202ENST00000334475 TRPC6Q9Y210 931 aa10.7□□□□□ -0.7
TREM1-202ENST00000334475 ZDHHC9Q9Y397 364 aa10.7□□□□□ -0.7
TREM1-202ENST00000334475 DDX49Q9Y6V7 483 aaKnown RBP10.7□□□□□ -0.7
TREM1-202ENST00000334475 TAF5LO75529 589 aa10.69□□□□□ -0.7
TREM1-202ENST00000334475 PYGBP11216 843 aa10.69□□□□□ -0.7
TREM1-202ENST00000334475 HSP90B1P14625 803 aaKnown RBP10.69□□□□□ -0.7
TREM1-202ENST00000334475 SLC27A3Q5K4L6 730 aa10.69□□□□□ -0.7
TREM1-202ENST00000334475 CCDC158Q5M9N0 1113 aa10.69□□□□□ -0.7
TREM1-202ENST00000334475 MCTP1Q6DN14 999 aa10.69□□□□□ -0.7
TREM1-202ENST00000334475 BLOC1S2Q6QNY1 142 aa10.69□□□□□ -0.7
TREM1-202ENST00000334475 NLRP10Q86W26 655 aa10.69□□□□□ -0.7
TREM1-202ENST00000334475 IFNL1Q8IU54 200 aa10.69□□□□□ -0.7
TREM1-202ENST00000334475 LMBRD1Q9NUN5 540 aa10.69□□□□□ -0.7
TREM1-202ENST00000334475 PAG1Q9NWQ8 432 aa10.69□□□□□ -0.7
TREM1-202ENST00000334475 DDX60Q8IY21 1712 aaKnown RBP10.68□□□□□ -0.7
TREM1-202ENST00000334475 A0A1B0GUL7 405 aa10.68□□□□□ -0.7
TREM1-202ENST00000334475 RGL2O15211 777 aa10.68□□□□□ -0.7
TREM1-202ENST00000334475 ZFYP08048 801 aaPredicted RBP10.68□□□□□ -0.7
TREM1-202ENST00000334475 IFIT1P09914 478 aaKnown RBP10.68□□□□□ -0.7
TREM1-202ENST00000334475 C7P10643 843 aa10.68□□□□□ -0.7
TREM1-202ENST00000334475 ATN1P54259 1190 aaPredicted RBP10.68□□□□□ -0.7
TREM1-202ENST00000334475 IFIT5Q13325 482 aaKnown RBP10.68□□□□□ -0.7
TREM1-202ENST00000334475 TAF7LQ5H9L4 462 aa10.68□□□□□ -0.7
TREM1-202ENST00000334475 SMARCC1Q92922 1105 aaPredicted RBP10.68□□□□□ -0.7
TREM1-202ENST00000334475 SYTL4Q96C24 671 aaPredicted RBP10.68□□□□□ -0.7
TREM1-202ENST00000334475 ZNF512BQ96KM6 892 aaPredicted RBP10.68□□□□□ -0.7
TREM1-202ENST00000334475 NEUROD6Q96NK8 337 aa10.68□□□□□ -0.7
TREM1-202ENST00000334475 SLC4A9Q96Q91 983 aa10.68□□□□□ -0.7
TREM1-202ENST00000334475 DNAJC2Q99543 621 aaKnown RBP10.68□□□□□ -0.7
TREM1-202ENST00000334475 DSCC1Q9BVC3 393 aa10.68□□□□□ -0.7
TREM1-202ENST00000334475 SMC3Q9UQE7 1217 aa10.68□□□□□ -0.7
TREM1-202ENST00000334475 ZBTB1Q9Y2K1 713 aa10.68□□□□□ -0.7
TREM1-202ENST00000334475 ATP6V1DQ9Y5K8 247 aa10.68□□□□□ -0.7
TREM1-202ENST00000334475 RIC1Q4ADV7 1423 aa10.67□□□□□ -0.7
TREM1-202ENST00000334475 AKAP11Q9UKA4 1901 aa10.67□□□□□ -0.7
TREM1-202ENST00000334475 ANKRD18BA2A2Z9 1011 aa10.67□□□□□ -0.7
TREM1-202ENST00000334475 PDE8AO60658 829 aa10.67□□□□□ -0.7
TREM1-202ENST00000334475 HMGB1P09429 215 aaKnown RBP10.67□□□□□ -0.7
TREM1-202ENST00000334475 RPS6KB1P23443 525 aa10.67□□□□□ -0.7
TREM1-202ENST00000334475 POLD1P28340 1107 aa10.67□□□□□ -0.7
TREM1-202ENST00000334475 PKP1Q13835 747 aa10.67□□□□□ -0.7
TREM1-202ENST00000334475 LRRC24Q50LG9 513 aa10.67□□□□□ -0.7
TREM1-202ENST00000334475 ZMYM1Q5SVZ6 1142 aa10.67□□□□□ -0.7
TREM1-202ENST00000334475 ZNF34Q8IZ26 560 aa10.67□□□□□ -0.7
TREM1-202ENST00000334475 TMEM87AQ8NBN3 555 aa10.67□□□□□ -0.7
TREM1-202ENST00000334475 ZNF526Q8TF50 670 aaPredicted RBP10.67□□□□□ -0.7
TREM1-202ENST00000334475 TAF1LQ8IZX4 1826 aa10.67□□□□□ -0.7
TREM1-202ENST00000334475 DOCK2Q92608 1830 aa10.67□□□□□ -0.7
TREM1-202ENST00000334475 RTL9Q8NET4 1388 aa10.66□□□□□ -0.7
TREM1-202ENST00000334475 TTLL13PA6NNM8 815 aa10.66□□□□□ -0.7
TREM1-202ENST00000334475 CHRM1P11229 460 aaPredicted RBP10.66□□□□□ -0.7
TREM1-202ENST00000334475 EIF5P55010 431 aaKnown RBP10.66□□□□□ -0.7
TREM1-202ENST00000334475 CTSWP56202 376 aa10.66□□□□□ -0.7
TREM1-202ENST00000334475 ZNF445P59923 1031 aa10.66□□□□□ -0.7
TREM1-202ENST00000334475 CSPP1Q1MSJ5 1256 aa10.66□□□□□ -0.7
TREM1-202ENST00000334475 ADCK5Q3MIX3 580 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms