RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 BRINP3Q76B58 766 aa15.99■□□□□ 0.15
SYNE3-201ENST00000334258 CNPY4Q8N129 248 aa15.99■□□□□ 0.15
SYNE3-201ENST00000334258 TRIM34Q9BYJ4 488 aa15.99■□□□□ 0.15
SYNE3-201ENST00000334258 ARGLU1Q9NWB6 273 aaPredicted RBP15.99■□□□□ 0.15
SYNE3-201ENST00000334258 NDUFB9Q9Y6M9 179 aa15.99■□□□□ 0.15
SYNE3-201ENST00000334258 TAF5LO75529 589 aa15.98■□□□□ 0.15
SYNE3-201ENST00000334258 CLCN6P51797 869 aa15.98■□□□□ 0.15
SYNE3-201ENST00000334258 MTX1Q13505 466 aa15.98■□□□□ 0.15
SYNE3-201ENST00000334258 TMCO3Q6UWJ1 677 aa15.98■□□□□ 0.15
SYNE3-201ENST00000334258 CCDC129Q6ZRS4 1044 aa15.98■□□□□ 0.15
SYNE3-201ENST00000334258 LRRN4CLQ8ND94 238 aa15.98■□□□□ 0.15
SYNE3-201ENST00000334258 PPP1R13BQ96KQ4 1090 aa15.98■□□□□ 0.15
SYNE3-201ENST00000334258 DNAI1Q9UI46 699 aa15.98■□□□□ 0.15
SYNE3-201ENST00000334258 SCRN1Q12765 414 aa15.98■□□□□ 0.15
SYNE3-201ENST00000334258 DNAJC2Q99543 621 aaKnown RBP15.98■□□□□ 0.15
SYNE3-201ENST00000334258 DBF4Q9UBU7 674 aaPredicted RBP15.98■□□□□ 0.15
SYNE3-201ENST00000334258 RCOR1Q9UKL0 485 aa15.98■□□□□ 0.15
SYNE3-201ENST00000334258 E4F1Q66K89 784 aaPredicted RBP15.97■□□□□ 0.15
SYNE3-201ENST00000334258 XPO4Q9C0E2 1151 aaKnown RBP15.97■□□□□ 0.15
SYNE3-201ENST00000334258 SLAIN2Q9P270 581 aa15.97■□□□□ 0.15
SYNE3-201ENST00000334258 TAOK2Q9UL54 1235 aa15.97■□□□□ 0.15
SYNE3-201ENST00000334258 A0A1B0GVL5 298 aa15.97■□□□□ 0.15
SYNE3-201ENST00000334258 MYCNP04198 464 aaPredicted RBP15.97■□□□□ 0.15
SYNE3-201ENST00000334258 TPM4P67936 248 aa15.97■□□□□ 0.15
SYNE3-201ENST00000334258 TEX35Q5T0J7 233 aa15.97■□□□□ 0.15
SYNE3-201ENST00000334258 BICC1Q9H694 974 aaKnown RBP15.97■□□□□ 0.15
SYNE3-201ENST00000334258 RAPGEF4Q8WZA2 1011 aa15.97■□□□□ 0.15
SYNE3-201ENST00000334258 PRDM11Q9NQV5 511 aa15.97■□□□□ 0.15
SYNE3-201ENST00000334258 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.97■□□□□ 0.15
SYNE3-201ENST00000334258 KAT6BQ8WYB5 2073 aa15.96■□□□□ 0.15
SYNE3-201ENST00000334258 URI1O94763 535 aaPredicted RBP15.96■□□□□ 0.15
SYNE3-201ENST00000334258 FAM177A1Q8N128 213 aaPredicted RBP15.96■□□□□ 0.15
SYNE3-201ENST00000334258 SUCLG2Q96I99 432 aa15.96■□□□□ 0.15
SYNE3-201ENST00000334258 PTPDC1A2A3K4 754 aa15.96■□□□□ 0.15
SYNE3-201ENST00000334258 NFATC2IPQ8NCF5 419 aa15.96■□□□□ 0.15
SYNE3-201ENST00000334258 CCDC150Q8NCX0 1101 aa15.96■□□□□ 0.15
SYNE3-201ENST00000334258 ALDH8A1Q9H2A2 487 aaPredicted RBP15.96■□□□□ 0.15
SYNE3-201ENST00000334258 GRM8O00222 908 aa15.95■□□□□ 0.14
SYNE3-201ENST00000334258 ALDH1L1O75891 902 aa15.95■□□□□ 0.14
SYNE3-201ENST00000334258 PNMA6AP0CW24 399 aaPredicted RBP15.95■□□□□ 0.14
SYNE3-201ENST00000334258 ISM2Q6H9L7 571 aa15.95■□□□□ 0.14
SYNE3-201ENST00000334258 ADCY9O60503 1353 aa15.95■□□□□ 0.14
SYNE3-201ENST00000334258 HNRNPH2P55795 449 aaKnown RBP15.95■□□□□ 0.14
SYNE3-201ENST00000334258 APOBRQ0VD83 1088 aa15.95■□□□□ 0.14
SYNE3-201ENST00000334258 PROSER3Q2NL68 480 aa15.95■□□□□ 0.14
SYNE3-201ENST00000334258 PLEKHO1Q53GL0 409 aaPredicted RBP15.95■□□□□ 0.14
SYNE3-201ENST00000334258 KSR2Q6VAB6 950 aa15.95■□□□□ 0.14
SYNE3-201ENST00000334258 SEC62Q99442 399 aaKnown RBP15.95■□□□□ 0.14
SYNE3-201ENST00000334258 NCOA5Q9HCD5 579 aaKnown RBP15.95■□□□□ 0.14
SYNE3-201ENST00000334258 IMPACTQ9P2X3 320 aa15.95■□□□□ 0.14
SYNE3-201ENST00000334258 CHGBP05060 677 aa15.95■□□□□ 0.14
SYNE3-201ENST00000334258 H2AFXP16104 143 aaPredicted RBP15.95■□□□□ 0.14
SYNE3-201ENST00000334258 DPCR1Q3MIW9 517 aa15.95■□□□□ 0.14
SYNE3-201ENST00000334258 MRPS27Q92552 414 aaKnown RBP15.95■□□□□ 0.14
SYNE3-201ENST00000334258 LMOD1P29536 600 aaPredicted RBP15.94■□□□□ 0.14
SYNE3-201ENST00000334258 ADD1P35611 737 aaKnown RBP15.94■□□□□ 0.14
SYNE3-201ENST00000334258 GNL2Q13823 731 aaKnown RBP15.94■□□□□ 0.14
SYNE3-201ENST00000334258 STK38Q15208 465 aa15.94■□□□□ 0.14
SYNE3-201ENST00000334258 NBPF11Q86T75 865 aa15.94■□□□□ 0.14
SYNE3-201ENST00000334258 FHOD1Q9Y613 1164 aa15.94■□□□□ 0.14
SYNE3-201ENST00000334258 ERBB3P21860 1342 aa15.94■□□□□ 0.14
SYNE3-201ENST00000334258 MYL6BP14649 208 aa15.94■□□□□ 0.14
SYNE3-201ENST00000334258 NAA16Q6N069 864 aaPredicted RBP15.94■□□□□ 0.14
SYNE3-201ENST00000334258 ARMCX5Q6P1M9 558 aa15.94■□□□□ 0.14
SYNE3-201ENST00000334258 OSBPL5Q9H0X9 879 aaPredicted RBP15.94■□□□□ 0.14
SYNE3-201ENST00000334258 L2HGDHQ9H9P8 463 aa15.94■□□□□ 0.14
SYNE3-201ENST00000334258 FAM53CQ9NYF3 392 aa15.94■□□□□ 0.14
SYNE3-201ENST00000334258 U3KPZ7 1027 aaPredicted RBP15.94■□□□□ 0.14
SYNE3-201ENST00000334258 APPP05067 770 aa15.93■□□□□ 0.14
SYNE3-201ENST00000334258 CYP21A2P08686 494 aa15.93■□□□□ 0.14
SYNE3-201ENST00000334258 TOM1L2Q6ZVM7 507 aa15.93■□□□□ 0.14
SYNE3-201ENST00000334258 TSGA10IPQ3SY00 556 aa15.93■□□□□ 0.14
SYNE3-201ENST00000334258 NSUN7Q8NE18 718 aaKnown RBP15.93■□□□□ 0.14
SYNE3-201ENST00000334258 CYP2C19P33261 490 aa15.93■□□□□ 0.14
SYNE3-201ENST00000334258 ENGASEQ8NFI3 743 aa15.93■□□□□ 0.14
SYNE3-201ENST00000334258 PCDHA7Q9UN72 937 aa15.93■□□□□ 0.14
SYNE3-201ENST00000334258 MED23Q9ULK4 1368 aa15.92■□□□□ 0.14
SYNE3-201ENST00000334258 POLR3DP05423 398 aaPredicted RBP15.92■□□□□ 0.14
SYNE3-201ENST00000334258 HOXB7P09629 217 aa15.92■□□□□ 0.14
SYNE3-201ENST00000334258 ETF1P62495 437 aaKnown RBP15.92■□□□□ 0.14
SYNE3-201ENST00000334258 NEK11Q8NG66 645 aa15.92■□□□□ 0.14
SYNE3-201ENST00000334258 RGPD2P0DJD1 1756 aa15.92■□□□□ 0.14
SYNE3-201ENST00000334258 PSDA5PKW4 1024 aaPredicted RBP15.92■□□□□ 0.14
SYNE3-201ENST00000334258 SLC3A2P08195 630 aaKnown RBP15.92■□□□□ 0.14
SYNE3-201ENST00000334258 DDX46Q7L014 1031 aaKnown RBP15.92■□□□□ 0.14
SYNE3-201ENST00000334258 CHST3Q7LGC8 479 aa15.92■□□□□ 0.14
SYNE3-201ENST00000334258 CREBRFQ8IUR6 639 aa15.92■□□□□ 0.14
SYNE3-201ENST00000334258 KIAA1468Q9P260 1216 aa15.92■□□□□ 0.14
SYNE3-201ENST00000334258 MST1RQ04912 1400 aa15.92■□□□□ 0.14
SYNE3-201ENST00000334258 NDUFA8P51970 172 aa15.92■□□□□ 0.14
SYNE3-201ENST00000334258 RIC3Q7Z5B4 369 aa15.92■□□□□ 0.14
SYNE3-201ENST00000334258 LINS1Q8NG48 757 aa15.92■□□□□ 0.14
SYNE3-201ENST00000334258 LLPHQ9BRT6 129 aaKnown RBP15.92■□□□□ 0.14
SYNE3-201ENST00000334258 SEC31AO94979 1220 aaKnown RBP15.91■□□□□ 0.14
SYNE3-201ENST00000334258 PLA2G4AP47712 749 aa15.91■□□□□ 0.14
SYNE3-201ENST00000334258 CARD6Q9BX69 1037 aa15.91■□□□□ 0.14
SYNE3-201ENST00000334258 ZNF330Q9Y3S2 320 aaPredicted RBP15.91■□□□□ 0.14
SYNE3-201ENST00000334258 PXDNQ92626 1479 aa15.91■□□□□ 0.14
SYNE3-201ENST00000334258 ZNF142P52746 1687 aaPredicted RBP15.91■□□□□ 0.14
SYNE3-201ENST00000334258 RNMTO43148 476 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms