RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 ZFYP08048 801 aaPredicted RBP13.71□□□□□ -0.21
CSPG4P4Y-201ENST00000333235 HAND2P61296 217 aa13.71□□□□□ -0.21
CSPG4P4Y-201ENST00000333235 TRDNQ13061 729 aa13.71□□□□□ -0.21
CSPG4P4Y-201ENST00000333235 IFIT5Q13325 482 aaKnown RBP13.71□□□□□ -0.21
CSPG4P4Y-201ENST00000333235 STOX1Q6ZVD7 989 aa13.71□□□□□ -0.21
CSPG4P4Y-201ENST00000333235 CCDC186Q7Z3E2 898 aa13.71□□□□□ -0.21
CSPG4P4Y-201ENST00000333235 TICAM2Q86XR7 235 aa13.71□□□□□ -0.21
CSPG4P4Y-201ENST00000333235 MYRIPQ8NFW9 859 aa13.71□□□□□ -0.21
CSPG4P4Y-201ENST00000333235 PGBD1Q96JS3 809 aa13.71□□□□□ -0.21
CSPG4P4Y-201ENST00000333235 TNS3Q68CZ2 1445 aa13.71□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 KIF1AQ12756 1690 aa13.71□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 IL2RBP14784 551 aa13.71□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 PTGS1P23219 599 aa13.71□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 SPATA31A3Q5VYP0 1347 aa13.7□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 PALLDQ8WX93 1383 aa13.7□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 ATG3Q9NT62 314 aa13.7□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 TMOD3Q9NYL9 352 aa13.7□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 MAST3O60307 1309 aa13.7□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 CIAO1O76071 339 aa13.7□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 ATL3Q6DD88 541 aa13.7□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 SMARCC2Q8TAQ2 1214 aa13.7□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 PUS3Q9BZE2 481 aaKnown RBP13.69□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.69□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 CLIP2Q9UDT6 1046 aa13.69□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 ZNF142P52746 1687 aaPredicted RBP13.69□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 STK38Q15208 465 aa13.69□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 STX1AQ16623 288 aa13.69□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 SYNE3Q6ZMZ3 975 aa13.69□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 KIAA1524Q8TCG1 905 aa13.69□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 ZNF274Q96GC6 653 aaPredicted RBP13.69□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 NAT10Q9H0A0 1025 aaKnown RBP13.69□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 MST1RQ04912 1400 aa13.69□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 WDR17Q8IZU2 1322 aa13.69□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 APPP05067 770 aa13.69□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 FSIP1Q8NA03 581 aa13.69□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 MRC1P22897 1456 aa13.69□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 AP5Z1O43299 807 aa13.68□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 GNL2Q13823 731 aaKnown RBP13.68□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 METTL24Q5JXM2 366 aa13.68□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 TTLL5Q6EMB2 1281 aa13.68□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 XAGE2Q96GT9 111 aa13.68□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 C8orf76Q96K31 380 aa13.68□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 ZNF213O14771 459 aa13.68□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 PDIA3P30101 505 aaKnown RBP13.68□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 FBXW7Q969H0 707 aa13.68□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 SPTLC3Q9NUV7 552 aa13.68□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 ANO10Q9NW15 660 aa13.68□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 PYCARDQ9ULZ3 195 aa13.68□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 PLEKHG2Q9H7P9 1386 aa13.68□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 GOLGA8BA8MQT2 603 aa13.68□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 STARD3NLO95772 234 aa13.68□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 FAM89AQ96GI7 184 aa13.68□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 USP28Q96RU2 1077 aa13.68□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 CNNM1Q9NRU3 951 aa13.68□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 ZNF75DP51815 510 aa13.67□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 TCIRG1Q13488 830 aa13.67□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 CEP57L1Q8IYX8 460 aa13.67□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 RCOR1Q9UKL0 485 aa13.67□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 EXOSC10Q01780 885 aaKnown RBP13.67□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 CPLX2Q6PUV4 134 aaKnown RBP13.67□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.67□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 TDRD7Q8NHU6 1098 aaKnown RBP13.67□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 NCOA7Q8NI08 942 aa13.67□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 RGPD5Q99666 1765 aa13.67□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 KLF18A0A0U1RQI7 1052 aa13.67□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 FAM160A1Q05DH4 1040 aa13.67□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 ZSCAN25Q6NSZ9 544 aa13.67□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 LDHAL6AQ6ZMR3 332 aa13.67□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 OSBP2Q969R2 916 aa13.67□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 TEX13AQ9BXU3 409 aaPredicted RBP13.67□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 FTOQ9C0B1 505 aaKnown RBP eCLIP13.67□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 M0R2C6 588 aa13.66□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 PRC1O43663 620 aa13.66□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 ORC3Q9UBD5 711 aaPredicted RBP13.66□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 FBXO3Q9UK99 471 aa13.66□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 TRPM3Q9HCF6 1732 aaPredicted RBP13.66□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 SIPA1L3O60292 1781 aaPredicted RBP13.66□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 CAMTA1Q9Y6Y1 1673 aa13.66□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 POLR3DP05423 398 aaPredicted RBP13.66□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 ATP2B3Q16720 1220 aa13.66□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 RBM43Q6ZSC3 357 aaKnown RBP13.66□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.66□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 APPBP2Q92624 585 aa13.66□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 SCN11AQ9UI33 1791 aa13.66□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 C5P01031 1676 aa13.66□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 CPDO75976 1380 aa13.65□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 HSP90AB3PQ58FF7 597 aa13.65□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 MRPS27Q92552 414 aaKnown RBP13.65□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 KCNF1Q9H3M0 494 aa13.65□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 GPTP24298 496 aa13.65□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 ADORA1P30542 326 aa13.65□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 TPM4P67936 248 aa13.65□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 TPD52L1Q16890 204 aaPredicted RBP13.65□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 CTDNEP1O95476 244 aa13.65□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 ZAP70P43403 619 aa13.65□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 TBC1D2BQ9UPU7 963 aa13.65□□□□□ -0.22
CSPG4P4Y-201ENST00000333235 CARMIL3Q8ND23 1372 aa13.64□□□□□ -0.23
CSPG4P4Y-201ENST00000333235 IDH1O75874 414 aaKnown RBP13.64□□□□□ -0.23
CSPG4P4Y-201ENST00000333235 FGAP02671 866 aa13.64□□□□□ -0.23
CSPG4P4Y-201ENST00000333235 RAB11FIP4Q86YS3 637 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms