RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 HNRNPUQ00839 825 aaKnown RBP eCLIP15.4■□□□□ 0.06
CMTM1-203ENST00000333001 RABL6Q3YEC7 729 aaPredicted RBP15.4■□□□□ 0.06
CMTM1-203ENST00000333001 C15orf52Q6ZUT6 534 aaKnown RBP15.4■□□□□ 0.06
CMTM1-203ENST00000333001 CDC37L1Q7L3B6 337 aa15.4■□□□□ 0.06
CMTM1-203ENST00000333001 USP44Q9H0E7 712 aa15.4■□□□□ 0.06
CMTM1-203ENST00000333001 PRDM10Q9NQV6 1147 aa15.4■□□□□ 0.06
CMTM1-203ENST00000333001 NOB1Q9ULX3 412 aaKnown RBP15.4■□□□□ 0.06
CMTM1-203ENST00000333001 MYO3BQ8WXR4 1341 aa15.4■□□□□ 0.06
CMTM1-203ENST00000333001 SCN9AQ15858 1988 aa15.39■□□□□ 0.05
CMTM1-203ENST00000333001 STRIP1Q5VSL9 837 aa15.39■□□□□ 0.05
CMTM1-203ENST00000333001 KAZALD1Q96I82 304 aa15.39■□□□□ 0.05
CMTM1-203ENST00000333001 BICC1Q9H694 974 aaKnown RBP15.39■□□□□ 0.05
CMTM1-203ENST00000333001 PSME4Q14997 1843 aa15.38■□□□□ 0.05
CMTM1-203ENST00000333001 HIRAP54198 1017 aaPredicted RBP15.38■□□□□ 0.05
CMTM1-203ENST00000333001 TRPM4Q8TD43 1214 aa15.38■□□□□ 0.05
CMTM1-203ENST00000333001 WTIPA6NIX2 430 aaPredicted RBP15.37■□□□□ 0.05
CMTM1-203ENST00000333001 FOXN1O15353 648 aa15.37■□□□□ 0.05
CMTM1-203ENST00000333001 USP17L8P0C7I0 530 aa15.37■□□□□ 0.05
CMTM1-203ENST00000333001 ZNF280AP59817 542 aaPredicted RBP15.37■□□□□ 0.05
CMTM1-203ENST00000333001 TBC1D10BQ4KMP7 808 aaPredicted RBP15.37■□□□□ 0.05
CMTM1-203ENST00000333001 SAMD7Q7Z3H4 446 aa15.37■□□□□ 0.05
CMTM1-203ENST00000333001 ZNF804AQ7Z570 1209 aa15.37■□□□□ 0.05
CMTM1-203ENST00000333001 OGFOD1Q8N543 542 aa15.37■□□□□ 0.05
CMTM1-203ENST00000333001 DCPSQ96C86 337 aaKnown RBP15.37■□□□□ 0.05
CMTM1-203ENST00000333001 ZNF594Q96JF6 807 aaPredicted RBP15.37■□□□□ 0.05
CMTM1-203ENST00000333001 GMLQ99445 158 aa15.37■□□□□ 0.05
CMTM1-203ENST00000333001 TRPM7Q96QT4 1865 aa15.37■□□□□ 0.05
CMTM1-203ENST00000333001 MROH5Q6ZUA9 1318 aa15.37■□□□□ 0.05
CMTM1-203ENST00000333001 TAF5LO75529 589 aa15.36■□□□□ 0.05
CMTM1-203ENST00000333001 VEGFBP49765 207 aa15.36■□□□□ 0.05
CMTM1-203ENST00000333001 UBE4AQ14139 1066 aa15.36■□□□□ 0.05
CMTM1-203ENST00000333001 KIF4BQ2VIQ3 1234 aa15.36■□□□□ 0.05
CMTM1-203ENST00000333001 DEFB115Q30KQ5 88 aa15.36■□□□□ 0.05
CMTM1-203ENST00000333001 RBM26Q5T8P6 1007 aaKnown RBP15.36■□□□□ 0.05
CMTM1-203ENST00000333001 TTLL5Q6EMB2 1281 aa15.36■□□□□ 0.05
CMTM1-203ENST00000333001 TXNRD3Q86VQ6 643 aa15.36■□□□□ 0.05
CMTM1-203ENST00000333001 HELBQ8NG08 1087 aaPredicted RBP15.36■□□□□ 0.05
CMTM1-203ENST00000333001 ABT1Q9ULW3 272 aaKnown RBP15.36■□□□□ 0.05
CMTM1-203ENST00000333001 SHTN1A0MZ66 631 aa15.35■□□□□ 0.05
CMTM1-203ENST00000333001 RASSF10A6NK89 507 aa15.35■□□□□ 0.05
CMTM1-203ENST00000333001 PLIN1O60240 522 aa15.35■□□□□ 0.05
CMTM1-203ENST00000333001 UBTFL1P0CB47 393 aaPredicted RBP15.35■□□□□ 0.05
CMTM1-203ENST00000333001 MAP2K1Q02750 393 aaPredicted RBP15.35■□□□□ 0.05
CMTM1-203ENST00000333001 DACT2Q5SW24 774 aa15.35■□□□□ 0.05
CMTM1-203ENST00000333001 ANKRD44Q8N8A2 993 aa15.35■□□□□ 0.05
CMTM1-203ENST00000333001 FBXW7Q969H0 707 aa15.35■□□□□ 0.05
CMTM1-203ENST00000333001 CD209Q9NNX6 404 aa15.35■□□□□ 0.05
CMTM1-203ENST00000333001 RIPOR2Q9Y4F9 1068 aa15.35■□□□□ 0.05
CMTM1-203ENST00000333001 KRT26Q7Z3Y9 468 aa15.34■□□□□ 0.05
CMTM1-203ENST00000333001 GLIS2Q9BZE0 524 aaPredicted RBP15.34■□□□□ 0.05
CMTM1-203ENST00000333001 MYOZ2Q9NPC6 264 aa15.34■□□□□ 0.05
CMTM1-203ENST00000333001 HDAC9Q9UKV0 1011 aa15.34■□□□□ 0.05
CMTM1-203ENST00000333001 POLR2AP24928 1970 aaKnown RBP15.34■□□□□ 0.05
CMTM1-203ENST00000333001 TRAF5O00463 557 aa15.33■□□□□ 0.04
CMTM1-203ENST00000333001 CELF2O95319 508 aaKnown RBP15.33■□□□□ 0.04
CMTM1-203ENST00000333001 IL1R1P14778 569 aa15.33■□□□□ 0.04
CMTM1-203ENST00000333001 GTF2IP78347 998 aa15.33■□□□□ 0.04
CMTM1-203ENST00000333001 CST9Q5W186 159 aa15.33■□□□□ 0.04
CMTM1-203ENST00000333001 INTS3Q68E01 1043 aaKnown RBP15.33■□□□□ 0.04
CMTM1-203ENST00000333001 USP48Q86UV5 1035 aa15.33■□□□□ 0.04
CMTM1-203ENST00000333001 SULF1Q8IWU6 871 aa15.33■□□□□ 0.04
CMTM1-203ENST00000333001 BEGAINQ9BUH8 593 aa15.33■□□□□ 0.04
CMTM1-203ENST00000333001 FBXO3Q9UK99 471 aa15.33■□□□□ 0.04
CMTM1-203ENST00000333001 GNAI3P08754 354 aa15.32■□□□□ 0.04
CMTM1-203ENST00000333001 KLRK1P26718 216 aa15.32■□□□□ 0.04
CMTM1-203ENST00000333001 ECE1P42892 770 aa15.32■□□□□ 0.04
CMTM1-203ENST00000333001 FKBP1AP62942 108 aaKnown RBP15.32■□□□□ 0.04
CMTM1-203ENST00000333001 SCARF1Q14162 830 aa15.32■□□□□ 0.04
CMTM1-203ENST00000333001 METTL24Q5JXM2 366 aa15.32■□□□□ 0.04
CMTM1-203ENST00000333001 PAXIP1Q6ZW49 1069 aaPredicted RBP15.32■□□□□ 0.04
CMTM1-203ENST00000333001 PUS3Q9BZE2 481 aaKnown RBP15.32■□□□□ 0.04
CMTM1-203ENST00000333001 WBP1LQ9NX94 342 aa15.32■□□□□ 0.04
CMTM1-203ENST00000333001 TLL2Q9Y6L7 1015 aa15.32■□□□□ 0.04
CMTM1-203ENST00000333001 ZBED9Q6R2W3 1325 aa15.32■□□□□ 0.04
CMTM1-203ENST00000333001 IRS2Q9Y4H2 1338 aa15.32■□□□□ 0.04
CMTM1-203ENST00000333001 SNAP23O00161 211 aa15.31■□□□□ 0.04
CMTM1-203ENST00000333001 SASH1O94885 1247 aa15.31■□□□□ 0.04
CMTM1-203ENST00000333001 EGFRP00533 1210 aa15.31■□□□□ 0.04
CMTM1-203ENST00000333001 HIBADHP31937 336 aaKnown RBP15.31■□□□□ 0.04
CMTM1-203ENST00000333001 LBX1P52954 281 aa15.31■□□□□ 0.04
CMTM1-203ENST00000333001 ATF7IPQ6VMQ6 1270 aa15.31■□□□□ 0.04
CMTM1-203ENST00000333001 HHIPL1Q96JK4 782 aa15.31■□□□□ 0.04
CMTM1-203ENST00000333001 PITPNM2Q9BZ72 1349 aa15.31■□□□□ 0.04
CMTM1-203ENST00000333001 A0A1B0GUL6 1792 aa15.31■□□□□ 0.04
CMTM1-203ENST00000333001 PDE8BO95263 885 aa15.3■□□□□ 0.04
CMTM1-203ENST00000333001 CAVIN4Q5BKX8 364 aa15.3■□□□□ 0.04
CMTM1-203ENST00000333001 VPS37DQ86XT2 251 aa15.3■□□□□ 0.04
CMTM1-203ENST00000333001 FRAT1Q92837 279 aaPredicted RBP15.3■□□□□ 0.04
CMTM1-203ENST00000333001 WDR33Q9C0J8 1336 aaKnown RBP15.3■□□□□ 0.04
CMTM1-203ENST00000333001 GGA3Q9NZ52 723 aa15.3■□□□□ 0.04
CMTM1-203ENST00000333001 EYA2O00167 538 aa15.29■□□□□ 0.04
CMTM1-203ENST00000333001 BCAR3O75815 825 aa15.29■□□□□ 0.04
CMTM1-203ENST00000333001 FMR1Q06787 632 aaKnown RBP eCLIP15.29■□□□□ 0.04
CMTM1-203ENST00000333001 LRRC24Q50LG9 513 aa15.29■□□□□ 0.04
CMTM1-203ENST00000333001 ZKSCAN2Q63HK3 967 aa15.29■□□□□ 0.04
CMTM1-203ENST00000333001 SAPCD2Q86UD0 394 aa15.29■□□□□ 0.04
CMTM1-203ENST00000333001 C2orf69Q8N8R5 385 aa15.29■□□□□ 0.04
CMTM1-203ENST00000333001 FAM84BQ96KN1 310 aaPredicted RBP15.29■□□□□ 0.04
CMTM1-203ENST00000333001 ZNF408Q9H9D4 720 aa15.29■□□□□ 0.04
CMTM1-203ENST00000333001 FAM205AQ6ZU69 1335 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms