RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 NSFL1CQ9UNZ2 370 aaKnown RBP14.98□□□□□ -0.01
VSTM4-202ENST00000332853 CCDC191Q8NCU4 936 aa14.98□□□□□ -0.01
VSTM4-202ENST00000332853 PRKCSHP14314 528 aaPredicted RBP14.98□□□□□ -0.01
VSTM4-202ENST00000332853 TPTE2Q6XPS3 522 aa14.98□□□□□ -0.01
VSTM4-202ENST00000332853 NYXQ9GZU5 481 aa14.98□□□□□ -0.01
VSTM4-202ENST00000332853 LUC7LQ9NQ29 371 aaKnown RBP14.98□□□□□ -0.01
VSTM4-202ENST00000332853 CROCC2H7BZ55 1655 aa14.98□□□□□ -0.01
VSTM4-202ENST00000332853 NEURL1BA8MQ27 555 aa14.98□□□□□ -0.01
VSTM4-202ENST00000332853 SGSM2O43147 1006 aa14.98□□□□□ -0.01
VSTM4-202ENST00000332853 FAM193AP78312 1265 aa14.98□□□□□ -0.01
VSTM4-202ENST00000332853 AXDND1Q5T1B0 1012 aaPredicted RBP14.98□□□□□ -0.01
VSTM4-202ENST00000332853 ZNF397Q8NF99 534 aaPredicted RBP14.98□□□□□ -0.01
VSTM4-202ENST00000332853 SLAIN2Q9P270 581 aa14.98□□□□□ -0.01
VSTM4-202ENST00000332853 PLEKHG1Q9ULL1 1385 aa14.98□□□□□ -0.01
VSTM4-202ENST00000332853 ZNF521Q96K83 1311 aa14.97□□□□□ -0.01
VSTM4-202ENST00000332853 MRPS27Q92552 414 aaKnown RBP14.97□□□□□ -0.01
VSTM4-202ENST00000332853 HELLSQ9NRZ9 838 aa14.97□□□□□ -0.01
VSTM4-202ENST00000332853 NLRP1Q9C000 1473 aa14.97□□□□□ -0.01
VSTM4-202ENST00000332853 CUL5Q93034 780 aa14.97□□□□□ -0.01
VSTM4-202ENST00000332853 RAD50Q92878 1312 aa14.97□□□□□ -0.01
VSTM4-202ENST00000332853 CDC42BPBQ9Y5S2 1711 aa14.97□□□□□ -0.01
VSTM4-202ENST00000332853 URI1O94763 535 aaPredicted RBP14.97□□□□□ -0.01
VSTM4-202ENST00000332853 IDEP14735 1019 aa14.97□□□□□ -0.01
VSTM4-202ENST00000332853 MCM9Q9NXL9 1143 aa14.97□□□□□ -0.01
VSTM4-202ENST00000332853 MAP3K4Q9Y6R4 1608 aa14.97□□□□□ -0.01
VSTM4-202ENST00000332853 PHKG2P15735 406 aa14.97□□□□□ -0.01
VSTM4-202ENST00000332853 NCOA5Q9HCD5 579 aaKnown RBP14.97□□□□□ -0.01
VSTM4-202ENST00000332853 TCP11L1Q9NUJ3 509 aa14.97□□□□□ -0.01
VSTM4-202ENST00000332853 ATP7BP35670 1465 aa14.97□□□□□ -0.01
VSTM4-202ENST00000332853 HLA-DOAP06340 250 aa14.97□□□□□ -0.01
VSTM4-202ENST00000332853 KCNG4Q8TDN1 519 aa14.97□□□□□ -0.01
VSTM4-202ENST00000332853 INTS4Q96HW7 963 aaKnown RBP14.97□□□□□ -0.01
VSTM4-202ENST00000332853 ARMT1Q9H993 441 aa14.97□□□□□ -0.01
VSTM4-202ENST00000332853 LRRIQ1Q96JM4 1722 aa14.97□□□□□ -0.01
VSTM4-202ENST00000332853 B4E1Z4 1266 aa14.96□□□□□ -0.01
VSTM4-202ENST00000332853 UBA7P41226 1012 aa14.96□□□□□ -0.01
VSTM4-202ENST00000332853 TSG101Q99816 390 aa14.96□□□□□ -0.01
VSTM4-202ENST00000332853 SPHKAPQ2M3C7 1700 aa14.96□□□□□ -0.01
VSTM4-202ENST00000332853 CASQ1P31415 396 aa14.96□□□□□ -0.01
VSTM4-202ENST00000332853 UVSSAQ2YD98 709 aa14.96□□□□□ -0.01
VSTM4-202ENST00000332853 RAB34Q9BZG1 259 aa14.96□□□□□ -0.01
VSTM4-202ENST00000332853 FKBP15Q5T1M5 1219 aa14.96□□□□□ -0.01
VSTM4-202ENST00000332853 FAM173BQ6P4H8 233 aa14.96□□□□□ -0.01
VSTM4-202ENST00000332853 ZNF804AQ7Z570 1209 aa14.96□□□□□ -0.01
VSTM4-202ENST00000332853 AOPEPQ8N6M6 819 aa14.96□□□□□ -0.01
VSTM4-202ENST00000332853 PRAMEF22A3QJZ6 481 aa14.96□□□□□ -0.02
VSTM4-202ENST00000332853 FAM98CQ17RN3 349 aaKnown RBP14.96□□□□□ -0.02
VSTM4-202ENST00000332853 PROSER3Q2NL68 480 aa14.96□□□□□ -0.02
VSTM4-202ENST00000332853 CCDC12Q8WUD4 166 aaPredicted RBP14.96□□□□□ -0.02
VSTM4-202ENST00000332853 CALML4Q96GE6 196 aa14.96□□□□□ -0.02
VSTM4-202ENST00000332853 DNA2P51530 1060 aa14.95□□□□□ -0.02
VSTM4-202ENST00000332853 TMTC2Q8N394 836 aa14.95□□□□□ -0.02
VSTM4-202ENST00000332853 SETQ01105 290 aaPredicted RBP14.95□□□□□ -0.02
VSTM4-202ENST00000332853 CACNA2D4Q7Z3S7 1137 aa14.95□□□□□ -0.02
VSTM4-202ENST00000332853 ZSCAN12O43309 604 aa14.95□□□□□ -0.02
VSTM4-202ENST00000332853 CNKSR2Q8WXI2 1034 aa14.95□□□□□ -0.02
VSTM4-202ENST00000332853 TTLL7Q6ZT98 887 aa14.95□□□□□ -0.02
VSTM4-202ENST00000332853 SPTLC2O15270 562 aa14.95□□□□□ -0.02
VSTM4-202ENST00000332853 KIF18AQ8NI77 898 aa14.94□□□□□ -0.02
VSTM4-202ENST00000332853 UBXN4Q92575 508 aa14.94□□□□□ -0.02
VSTM4-202ENST00000332853 AATKQ6ZMQ8 1374 aa14.94□□□□□ -0.02
VSTM4-202ENST00000332853 USP6P35125 1406 aa14.94□□□□□ -0.02
VSTM4-202ENST00000332853 MTIF2P46199 727 aaKnown RBP14.94□□□□□ -0.02
VSTM4-202ENST00000332853 PDE8AO60658 829 aa14.94□□□□□ -0.02
VSTM4-202ENST00000332853 FEZ1Q99689 392 aa14.94□□□□□ -0.02
VSTM4-202ENST00000332853 AOX1Q06278 1338 aa14.94□□□□□ -0.02
VSTM4-202ENST00000332853 HMGB2P26583 209 aaKnown RBP14.94□□□□□ -0.02
VSTM4-202ENST00000332853 PDCL2Q8N4E4 241 aa14.94□□□□□ -0.02
VSTM4-202ENST00000332853 TFCP2L1Q9NZI6 479 aa14.94□□□□□ -0.02
VSTM4-202ENST00000332853 TYRO3Q06418 890 aa14.94□□□□□ -0.02
VSTM4-202ENST00000332853 SAP30BPQ9UHR5 308 aaKnown RBP14.94□□□□□ -0.02
VSTM4-202ENST00000332853 GNAT2P19087 354 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 CDR1P51861 262 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 TNIP1Q15025 636 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 SPA17Q15506 151 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 DHX58Q96C10 678 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 CLASP1Q7Z460 1538 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 CHMP4BP1P59074 171 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 PUM3Q15397 648 aaKnown RBP14.93□□□□□ -0.02
VSTM4-202ENST00000332853 BEND3Q5T5X7 828 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 ZAP70P43403 619 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 WWC2Q6AWC2 1192 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 CENPHQ9H3R5 247 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 CABP5Q9NP86 173 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 KIF24Q5T7B8 1368 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 SH3TC1Q8TE82 1336 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 GPAA1O43292 621 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 KIF5CO60282 957 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 RRAGBQ5VZM2 374 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 FAM200AQ8TCP9 573 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 KDRP35968 1356 aa14.93□□□□□ -0.02
VSTM4-202ENST00000332853 UNC13BO14795 1591 aa14.92□□□□□ -0.02
VSTM4-202ENST00000332853 UBASH3AP57075 661 aa14.92□□□□□ -0.02
VSTM4-202ENST00000332853 KIF4BQ2VIQ3 1234 aa14.92□□□□□ -0.02
VSTM4-202ENST00000332853 CCDC186Q7Z3E2 898 aa14.92□□□□□ -0.02
VSTM4-202ENST00000332853 TTC12Q9H892 705 aaPredicted RBP14.92□□□□□ -0.02
VSTM4-202ENST00000332853 MYO6Q9UM54 1294 aa14.92□□□□□ -0.02
VSTM4-202ENST00000332853 IBSPP21815 317 aaPredicted RBP14.92□□□□□ -0.02
VSTM4-202ENST00000332853 LIG1P18858 919 aa14.92□□□□□ -0.02
VSTM4-202ENST00000332853 NAPAP54920 295 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms