RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 KIAA2012Q0VF49 1180 aa11.96□□□□□ -0.5
PRAMEF1-201ENST00000332296 CSPP1Q1MSJ5 1256 aa11.96□□□□□ -0.5
PRAMEF1-201ENST00000332296 FERMT3Q86UX7 667 aa11.96□□□□□ -0.5
PRAMEF1-201ENST00000332296 FAM212AQ96EL1 285 aa11.96□□□□□ -0.5
PRAMEF1-201ENST00000332296 USP16Q9Y5T5 823 aa11.96□□□□□ -0.5
PRAMEF1-201ENST00000332296 NHSQ6T4R5 1651 aa11.95□□□□□ -0.5
PRAMEF1-201ENST00000332296 NEURL1BA8MQ27 555 aa11.95□□□□□ -0.5
PRAMEF1-201ENST00000332296 DDX58O95786 925 aaKnown RBP11.95□□□□□ -0.5
PRAMEF1-201ENST00000332296 CHGBP05060 677 aa11.95□□□□□ -0.5
PRAMEF1-201ENST00000332296 PIP4K2AP48426 406 aaPredicted RBP11.95□□□□□ -0.5
PRAMEF1-201ENST00000332296 RIC3Q7Z5B4 369 aa11.95□□□□□ -0.5
PRAMEF1-201ENST00000332296 TTC6Q86TZ1 520 aa11.95□□□□□ -0.5
PRAMEF1-201ENST00000332296 C17orf53Q8N3J3 647 aaPredicted RBP11.95□□□□□ -0.5
PRAMEF1-201ENST00000332296 JARID2Q92833 1246 aaPredicted RBP11.95□□□□□ -0.5
PRAMEF1-201ENST00000332296 TTC12Q9H892 705 aaPredicted RBP11.95□□□□□ -0.5
PRAMEF1-201ENST00000332296 ARFGEF2Q9Y6D5 1785 aa11.95□□□□□ -0.5
PRAMEF1-201ENST00000332296 LETM1O95202 739 aaPredicted RBP11.95□□□□□ -0.5
PRAMEF1-201ENST00000332296 TOB2Q14106 344 aaPredicted RBP11.95□□□□□ -0.5
PRAMEF1-201ENST00000332296 XAGE3Q8WTP9 111 aa11.95□□□□□ -0.5
PRAMEF1-201ENST00000332296 MYD88Q99836 296 aa11.95□□□□□ -0.5
PRAMEF1-201ENST00000332296 NDUFB9Q9Y6M9 179 aa11.95□□□□□ -0.5
PRAMEF1-201ENST00000332296 LAMB4A4D0S4 1761 aa11.95□□□□□ -0.5
PRAMEF1-201ENST00000332296 HIP1O00291 1037 aa11.94□□□□□ -0.5
PRAMEF1-201ENST00000332296 LARP1BQ659C4 914 aaKnown RBP11.94□□□□□ -0.5
PRAMEF1-201ENST00000332296 GPIHBP1Q8IV16 184 aa11.94□□□□□ -0.5
PRAMEF1-201ENST00000332296 HDAC5Q9UQL6 1122 aa11.94□□□□□ -0.5
PRAMEF1-201ENST00000332296 KDM4AO75164 1064 aa11.94□□□□□ -0.5
PRAMEF1-201ENST00000332296 RPS6KB1P23443 525 aa11.94□□□□□ -0.5
PRAMEF1-201ENST00000332296 GCKRQ14397 625 aa11.94□□□□□ -0.5
PRAMEF1-201ENST00000332296 BLOC1S2Q6QNY1 142 aa11.94□□□□□ -0.5
PRAMEF1-201ENST00000332296 SASS6Q6UVJ0 657 aa11.94□□□□□ -0.5
PRAMEF1-201ENST00000332296 LAMA4Q16363 1823 aa11.93□□□□□ -0.5
PRAMEF1-201ENST00000332296 LIG1P18858 919 aa11.93□□□□□ -0.5
PRAMEF1-201ENST00000332296 STK3Q13188 491 aa11.93□□□□□ -0.5
PRAMEF1-201ENST00000332296 FAM196AQ6ZSG2 479 aa11.93□□□□□ -0.5
PRAMEF1-201ENST00000332296 COPS6Q7L5N1 327 aa11.93□□□□□ -0.5
PRAMEF1-201ENST00000332296 SLC4A9Q96Q91 983 aa11.93□□□□□ -0.5
PRAMEF1-201ENST00000332296 PDCL3Q9H2J4 239 aa11.93□□□□□ -0.5
PRAMEF1-201ENST00000332296 FAM13BQ9NYF5 915 aa11.93□□□□□ -0.5
PRAMEF1-201ENST00000332296 DBNLQ9UJU6 430 aaKnown RBP11.93□□□□□ -0.5
PRAMEF1-201ENST00000332296 CHMP3Q9Y3E7 222 aa11.93□□□□□ -0.5
PRAMEF1-201ENST00000332296 PALLDQ8WX93 1383 aa11.93□□□□□ -0.5
PRAMEF1-201ENST00000332296 PYGBP11216 843 aa11.92□□□□□ -0.5
PRAMEF1-201ENST00000332296 PSMA5P28066 241 aa11.92□□□□□ -0.5
PRAMEF1-201ENST00000332296 LRP10Q7Z4F1 713 aa11.92□□□□□ -0.5
PRAMEF1-201ENST00000332296 PIBF1Q8WXW3 757 aa11.92□□□□□ -0.5
PRAMEF1-201ENST00000332296 ZNF609O15014 1411 aa11.92□□□□□ -0.5
PRAMEF1-201ENST00000332296 TAF5LO75529 589 aa11.92□□□□□ -0.5
PRAMEF1-201ENST00000332296 TRIM37O94972 964 aa11.92□□□□□ -0.5
PRAMEF1-201ENST00000332296 RFX5P48382 616 aaPredicted RBP11.92□□□□□ -0.5
PRAMEF1-201ENST00000332296 KRT85P78386 507 aa11.92□□□□□ -0.5
PRAMEF1-201ENST00000332296 DNAJC10Q8IXB1 793 aa11.92□□□□□ -0.5
PRAMEF1-201ENST00000332296 METTL22Q9BUU2 404 aaPredicted RBP11.92□□□□□ -0.5
PRAMEF1-201ENST00000332296 MYH15Q9Y2K3 1946 aa11.91□□□□□ -0.5
PRAMEF1-201ENST00000332296 NEXNQ0ZGT2 675 aa11.91□□□□□ -0.5
PRAMEF1-201ENST00000332296 CCDC129Q6ZRS4 1044 aa11.91□□□□□ -0.5
PRAMEF1-201ENST00000332296 SMARCC1Q92922 1105 aaPredicted RBP11.91□□□□□ -0.5
PRAMEF1-201ENST00000332296 TJP1Q07157 1748 aa11.91□□□□□ -0.5
PRAMEF1-201ENST00000332296 LOC102724428A0A0B4J2F2 783 aa11.91□□□□□ -0.5
PRAMEF1-201ENST00000332296 JAK2O60674 1132 aa11.91□□□□□ -0.5
PRAMEF1-201ENST00000332296 PPP1R37O75864 691 aa11.91□□□□□ -0.5
PRAMEF1-201ENST00000332296 A1BGP04217 495 aa11.91□□□□□ -0.5
PRAMEF1-201ENST00000332296 ATP6V1AP38606 617 aa11.91□□□□□ -0.5
PRAMEF1-201ENST00000332296 SIK1P57059 783 aa11.91□□□□□ -0.5
PRAMEF1-201ENST00000332296 PTPN12Q05209 780 aaKnown RBP11.91□□□□□ -0.5
PRAMEF1-201ENST00000332296 TFCP2Q12800 502 aa11.91□□□□□ -0.5
PRAMEF1-201ENST00000332296 CAMK4Q16566 473 aa11.91□□□□□ -0.5
PRAMEF1-201ENST00000332296 RNF20Q5VTR2 975 aa11.91□□□□□ -0.5
PRAMEF1-201ENST00000332296 SEC62Q99442 399 aaKnown RBP11.91□□□□□ -0.5
PRAMEF1-201ENST00000332296 KCNF1Q9H3M0 494 aa11.91□□□□□ -0.5
PRAMEF1-201ENST00000332296 NOLC1Q14978 699 aaKnown RBP eCLIP11.9□□□□□ -0.5
PRAMEF1-201ENST00000332296 GLIPR1L2Q4G1C9 344 aa11.9□□□□□ -0.5
PRAMEF1-201ENST00000332296 TNNI3KQ59H18 835 aa11.9□□□□□ -0.5
PRAMEF1-201ENST00000332296 MFRPQ9BY79 579 aa11.9□□□□□ -0.5
PRAMEF1-201ENST00000332296 FPGT-TNNI3KV9GXZ4 949 aa11.9□□□□□ -0.5
PRAMEF1-201ENST00000332296 ELP1O95163 1332 aa11.9□□□□□ -0.5
PRAMEF1-201ENST00000332296 KCNQ4P56696 695 aa11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 ANKRD1Q15327 319 aa11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 USPL1Q5W0Q7 1092 aa11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 UBE3BQ7Z3V4 1068 aa11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 DBNDD2Q9BQY9 259 aa11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 TEX13AQ9BXU3 409 aaPredicted RBP11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 NUP62CLQ9H1M0 184 aa11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 ALDH8A1Q9H2A2 487 aaPredicted RBP11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 COPRSQ9NQ92 184 aa11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 HMG20BQ9P0W2 317 aa11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 TFIP11Q9UBB9 837 aaKnown RBP11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 MRVI1Q9Y6F6 885 aa11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 ATP5J2-PTCD1G3V325 749 aa11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 DYNC1I1O14576 645 aa11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 STARD3NLO95772 234 aa11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 CCDC192P0DO97 292 aa11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 ATP5JP18859 108 aa11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 TSGA10IPQ3SY00 556 aa11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 DNTTIP2Q5QJE6 756 aaKnown RBP11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 SPC24Q8NBT2 197 aa11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 DNAJC2Q99543 621 aaKnown RBP11.89□□□□□ -0.51
PRAMEF1-201ENST00000332296 NBPF26B4DH59 902 aa11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 PDCP20941 246 aa11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 MLLT3P42568 568 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms