RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 LRRFIP1Q32MZ4 808 aaKnown RBP18.9■□□□□ 0.62
PDGFB-201ENST00000331163 NOL10Q9BSC4 688 aaKnown RBP18.9■□□□□ 0.62
PDGFB-201ENST00000331163 ARMT1Q9H993 441 aa18.9■□□□□ 0.62
PDGFB-201ENST00000331163 MARF1Q9Y4F3 1742 aaKnown RBP18.9■□□□□ 0.62
PDGFB-201ENST00000331163 LPIN2Q92539 896 aa18.9■□□□□ 0.62
PDGFB-201ENST00000331163 GYS1P13807 737 aa18.89■□□□□ 0.61
PDGFB-201ENST00000331163 MCTP1Q6DN14 999 aa18.89■□□□□ 0.61
PDGFB-201ENST00000331163 PRR5LQ6MZQ0 368 aa18.89■□□□□ 0.61
PDGFB-201ENST00000331163 ZC3H12CQ9C0D7 883 aaKnown RBP18.89■□□□□ 0.61
PDGFB-201ENST00000331163 BCL2L12Q9HB09 334 aa18.89■□□□□ 0.61
PDGFB-201ENST00000331163 CCT2P78371 535 aaKnown RBP18.89■□□□□ 0.61
PDGFB-201ENST00000331163 RABL6Q3YEC7 729 aaPredicted RBP18.89■□□□□ 0.61
PDGFB-201ENST00000331163 BLOC1S2Q6QNY1 142 aa18.89■□□□□ 0.61
PDGFB-201ENST00000331163 PROM2Q8N271 834 aa18.89■□□□□ 0.61
PDGFB-201ENST00000331163 MRE11P49959 708 aa18.88■□□□□ 0.61
PDGFB-201ENST00000331163 RBM10P98175 930 aaKnown RBP18.88■□□□□ 0.61
PDGFB-201ENST00000331163 ATP2B2Q01814 1243 aa18.88■□□□□ 0.61
PDGFB-201ENST00000331163 CLEC4GQ6UXB4 293 aa18.88■□□□□ 0.61
PDGFB-201ENST00000331163 CCDC83Q8IWF9 413 aa18.88■□□□□ 0.61
PDGFB-201ENST00000331163 CYP46A1Q9Y6A2 500 aa18.88■□□□□ 0.61
PDGFB-201ENST00000331163 HIP1O00291 1037 aa18.88■□□□□ 0.61
PDGFB-201ENST00000331163 CLCN1P35523 988 aa18.88■□□□□ 0.61
PDGFB-201ENST00000331163 PRDM1O75626 825 aa18.88■□□□□ 0.61
PDGFB-201ENST00000331163 MCAMP43121 646 aa18.88■□□□□ 0.61
PDGFB-201ENST00000331163 RABEP1Q15276 862 aa18.88■□□□□ 0.61
PDGFB-201ENST00000331163 C2CD5Q86YS7 1000 aa18.88■□□□□ 0.61
PDGFB-201ENST00000331163 RASEFQ8IZ41 740 aa18.88■□□□□ 0.61
PDGFB-201ENST00000331163 NAPBQ9H115 298 aa18.88■□□□□ 0.61
PDGFB-201ENST00000331163 SGSM2O43147 1006 aa18.87■□□□□ 0.61
PDGFB-201ENST00000331163 HIBADHP31937 336 aaKnown RBP18.87■□□□□ 0.61
PDGFB-201ENST00000331163 TRIM28Q13263 835 aaKnown RBP18.87■□□□□ 0.61
PDGFB-201ENST00000331163 MCMDC2Q4G0Z9 681 aa18.87■□□□□ 0.61
PDGFB-201ENST00000331163 ZSCAN29Q8IWY8 852 aaPredicted RBP18.87■□□□□ 0.61
PDGFB-201ENST00000331163 NLGN1Q8N2Q7 840 aa18.87■□□□□ 0.61
PDGFB-201ENST00000331163 PDRG1Q9NUG6 133 aa18.87■□□□□ 0.61
PDGFB-201ENST00000331163 MBD4O95243 580 aa18.87■□□□□ 0.61
PDGFB-201ENST00000331163 ATP5JP18859 108 aa18.87■□□□□ 0.61
PDGFB-201ENST00000331163 RXRAP19793 462 aa18.87■□□□□ 0.61
PDGFB-201ENST00000331163 SPATA5Q8NB90 893 aa18.87■□□□□ 0.61
PDGFB-201ENST00000331163 ZKSCAN3Q9BRR0 538 aa18.87■□□□□ 0.61
PDGFB-201ENST00000331163 MINPP1Q9UNW1 487 aa18.87■□□□□ 0.61
PDGFB-201ENST00000331163 USP42Q9H9J4 1324 aaKnown RBP18.87■□□□□ 0.61
PDGFB-201ENST00000331163 DISP2A7MBM2 1401 aa18.87■□□□□ 0.61
PDGFB-201ENST00000331163 PICALMQ13492 652 aa18.86■□□□□ 0.61
PDGFB-201ENST00000331163 RASGRF1Q13972 1273 aa18.86■□□□□ 0.61
PDGFB-201ENST00000331163 RBM26Q5T8P6 1007 aaKnown RBP18.86■□□□□ 0.61
PDGFB-201ENST00000331163 KBTBD3Q8NAB2 608 aa18.86■□□□□ 0.61
PDGFB-201ENST00000331163 ZNF532Q9HCE3 1301 aa18.86■□□□□ 0.61
PDGFB-201ENST00000331163 COL16A1Q07092 1604 aaPredicted RBP18.86■□□□□ 0.61
PDGFB-201ENST00000331163 K7ELQ4 463 aaPredicted RBP18.86■□□□□ 0.61
PDGFB-201ENST00000331163 FERMT3Q86UX7 667 aa18.86■□□□□ 0.61
PDGFB-201ENST00000331163 ZGPATQ8N5A5 531 aaKnown RBP18.86■□□□□ 0.61
PDGFB-201ENST00000331163 SDR42E1Q8WUS8 393 aa18.86■□□□□ 0.61
PDGFB-201ENST00000331163 DBNDD1Q9H9R9 158 aa18.86■□□□□ 0.61
PDGFB-201ENST00000331163 AATFQ9NY61 560 aaKnown RBP eCLIP18.86■□□□□ 0.61
PDGFB-201ENST00000331163 RIPOR2Q9Y4F9 1068 aa18.86■□□□□ 0.61
PDGFB-201ENST00000331163 H0YIN7 160 aa18.85■□□□□ 0.61
PDGFB-201ENST00000331163 RNF113AO15541 343 aaKnown RBP18.85■□□□□ 0.61
PDGFB-201ENST00000331163 GTF2IP78347 998 aa18.85■□□□□ 0.61
PDGFB-201ENST00000331163 ADCK5Q3MIX3 580 aa18.85■□□□□ 0.61
PDGFB-201ENST00000331163 NUP133Q8WUM0 1156 aa18.85■□□□□ 0.61
PDGFB-201ENST00000331163 SLC4A4Q9Y6R1 1079 aa18.85■□□□□ 0.61
PDGFB-201ENST00000331163 AHDC1Q5TGY3 1603 aaPredicted RBP18.85■□□□□ 0.61
PDGFB-201ENST00000331163 ABCC12Q96J65 1359 aa18.84■□□□□ 0.61
PDGFB-201ENST00000331163 NAA16Q6N069 864 aaPredicted RBP18.84■□□□□ 0.61
PDGFB-201ENST00000331163 RBM17Q96I25 401 aaKnown RBP18.84■□□□□ 0.61
PDGFB-201ENST00000331163 CHAMP1Q96JM3 812 aa18.84■□□□□ 0.61
PDGFB-201ENST00000331163 STAP2Q9UGK3 403 aa18.84■□□□□ 0.61
PDGFB-201ENST00000331163 COL14A1Q05707 1796 aaKnown RBP18.84■□□□□ 0.61
PDGFB-201ENST00000331163 A0A0G2JLW4 131 aa18.84■□□□□ 0.61
PDGFB-201ENST00000331163 USP5P45974 858 aa18.84■□□□□ 0.61
PDGFB-201ENST00000331163 SCNN1DP51172 638 aa18.84■□□□□ 0.61
PDGFB-201ENST00000331163 GUCY1B3Q02153 619 aa18.84■□□□□ 0.61
PDGFB-201ENST00000331163 DPP8Q6V1X1 898 aaPredicted RBP18.84■□□□□ 0.61
PDGFB-201ENST00000331163 TXNRD3Q86VQ6 643 aa18.84■□□□□ 0.61
PDGFB-201ENST00000331163 INCENPQ9NQS7 918 aa18.84■□□□□ 0.61
PDGFB-201ENST00000331163 LMO7Q8WWI1 1683 aa18.84■□□□□ 0.61
PDGFB-201ENST00000331163 GPAA1O43292 621 aa18.84■□□□□ 0.61
PDGFB-201ENST00000331163 RANBP6O60518 1105 aaKnown RBP18.84■□□□□ 0.61
PDGFB-201ENST00000331163 PUS7LQ9H0K6 701 aaKnown RBP18.84■□□□□ 0.61
PDGFB-201ENST00000331163 HMG20BQ9P0W2 317 aa18.84■□□□□ 0.61
PDGFB-201ENST00000331163 C21orf2O43822 256 aa18.83■□□□□ 0.61
PDGFB-201ENST00000331163 CEBPZQ03701 1054 aaKnown RBP18.83■□□□□ 0.61
PDGFB-201ENST00000331163 ANP32BQ92688 251 aaKnown RBP18.83■□□□□ 0.61
PDGFB-201ENST00000331163 PIH1D3Q9NQM4 214 aaKnown RBP18.83■□□□□ 0.61
PDGFB-201ENST00000331163 GGA1Q9UJY5 639 aa18.83■□□□□ 0.61
PDGFB-201ENST00000331163 BCS1LQ9Y276 419 aa18.83■□□□□ 0.61
PDGFB-201ENST00000331163 PRKAB2O43741 272 aa18.83■□□□□ 0.6
PDGFB-201ENST00000331163 DIXDC1Q155Q3 683 aa18.83■□□□□ 0.6
PDGFB-201ENST00000331163 CREB3L3Q68CJ9 461 aa18.83■□□□□ 0.6
PDGFB-201ENST00000331163 SMC3Q9UQE7 1217 aa18.83■□□□□ 0.6
PDGFB-201ENST00000331163 ZNF213O14771 459 aa18.83■□□□□ 0.6
PDGFB-201ENST00000331163 CPLX1O14810 134 aa18.83■□□□□ 0.6
PDGFB-201ENST00000331163 SLC27A3Q5K4L6 730 aa18.83■□□□□ 0.6
PDGFB-201ENST00000331163 ILDR1Q86SU0 546 aaPredicted RBP18.83■□□□□ 0.6
PDGFB-201ENST00000331163 OSBP2Q969R2 916 aa18.83■□□□□ 0.6
PDGFB-201ENST00000331163 CCDC171Q6TFL3 1326 aa18.83■□□□□ 0.6
PDGFB-201ENST00000331163 MROH5Q6ZUA9 1318 aa18.83■□□□□ 0.6
PDGFB-201ENST00000331163 FAM184AQ8NB25 1140 aa18.82■□□□□ 0.6
PDGFB-201ENST00000331163 BRF1Q92994 677 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms